FFCP PHASE1:Hg19::chrX:17755245..17755252,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6322 | |EntrezGene=6322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10580 | |HGNC=10580 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-335bp_to_ENST00000380045_5end | |association_with_transcript=-335bp_to_ENST00000380045_5end | ||
|cluster_id=chrX:17755245..17755252,+ | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_6_at_SCML1_5end | |description=CAGE_peak_6_at_SCML1_5end | ||
|id=chrX:17755245..17755252,+ | |id=chrX:17755245..17755252,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.95e-11!18;CL:0000789!2.95e-11!18;CL:0002420!2.95e-11!18;CL:0002419!2.95e-11!18;CL:0000790!2.95e-11!18;CL:0000738!5.03e-11!140;CL:0000838!2.72e-10!52;CL:0000542!6.34e-10!53;CL:0000051!6.34e-10!53;CL:0000624!6.60e-08!6;CL:0002031!1.48e-07!124;CL:0002087!3.52e-07!119;CL:0000084!8.62e-07!25;CL:0000827!8.62e-07!25 | |ontology_enrichment_celltype=CL:0000791!2.95e-11!18;CL:0000789!2.95e-11!18;CL:0002420!2.95e-11!18;CL:0002419!2.95e-11!18;CL:0000790!2.95e-11!18;CL:0000738!5.03e-11!140;CL:0000838!2.72e-10!52;CL:0000542!6.34e-10!53;CL:0000051!6.34e-10!53;CL:0000624!6.60e-08!6;CL:0002031!1.48e-07!124;CL:0002087!3.52e-07!119;CL:0000084!8.62e-07!25;CL:0000827!8.62e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.43e-25;18!CL:0000789;1.43e-25;18!CL:0002419;1.43e-25;18!CL:0000623;1.66e-22;3!CL:0000624;8.81e-21;6!CL:0000084;4.06e-18;25!CL:0000542;7.60e-15;53!CL:0000625;7.04e-11;11!CL:0000226;1.39e-10;3!CL:0000842;1.39e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.48e-25,18;CL:0000789,1.48e-25,18;CL:0002420,1.48e-25,18;CL:0002419,1.48e-25,18;CL:0000790,1.48e-25,18;CL:0000838,1.58e-25,52;CL:0000542,5.35e-25,53;CL:0000051,5.35e-25,53;CL:0000623,1.49e-22,3;CL:0000825,1.49e-22,3;CL:0000624,9.28e-21,6;CL:0000084,4.16e-18,25;CL:0000827,4.16e-18,25;CL:0000738,3.28e-14,136;CL:0002087,2.08e-13,115;CL:0000625,7.04e-11,11;CL:0000037,7.09e-11,168;CL:0000226,1.03e-10,3;CL:0000842,1.03e-10,3;CL:0000988,3.74e-10,177;CL:0002031,1.73e-09,120;CL:0002032,1.45e-07,161;CL:0000837,1.45e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.43e-25;18!CL:0000051;7.60e-15;53!UBERON:0000358;7.45e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@SCML1 | |short_description=p6@SCML1 | ||
}} | }} |
Latest revision as of 06:55, 20 September 2015
Short description: | p6@SCML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCML1_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | -335bp_to_ENST00000380045_5end |
EntrezGene: | SCML1 |
HGNC: | 10580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.48e-25 | 18 |
alpha-beta T cell | 1.48e-25 | 18 |
immature T cell | 1.48e-25 | 18 |
mature T cell | 1.48e-25 | 18 |
immature alpha-beta T cell | 1.48e-25 | 18 |
lymphoid lineage restricted progenitor cell | 1.58e-25 | 52 |
lymphocyte | 5.35e-25 | 53 |
common lymphoid progenitor | 5.35e-25 | 53 |
natural killer cell | 1.49e-22 | 3 |
pro-NK cell | 1.49e-22 | 3 |
CD4-positive, alpha-beta T cell | 9.28e-21 | 6 |
T cell | 4.16e-18 | 25 |
pro-T cell | 4.16e-18 | 25 |
leukocyte | 3.28e-14 | 136 |
nongranular leukocyte | 2.08e-13 | 115 |
CD8-positive, alpha-beta T cell | 7.04e-11 | 11 |
hematopoietic stem cell | 7.09e-11 | 168 |
single nucleate cell | 1.03e-10 | 3 |
mononuclear cell | 1.03e-10 | 3 |
hematopoietic cell | 3.74e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 1.73e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.45e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-07 | 161 |