FFCP PHASE1:Hg19::chrX:19906013..19906024,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:19906013..19906024,-
|short_description=p16@SH3KBP1
|description=CAGE_peak_16_at_SH3KBP1_5end
|association_with_transcript=-269bp_to_NM_031892,uc004czm.2_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30011 | |EntrezGene=30011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13867 | |HGNC=13867 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JPT6,Q96B97 | |UniProt=Q5JPT6,Q96B97 | ||
|association_with_transcript=-269bp_to_NM_031892,uc004czm.2_5end | |||
|cluster_id=chrX:19906013..19906024,- | |||
|description=CAGE_peak_16_at_SH3KBP1_5end | |||
|id=chrX:19906013..19906024,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002564;4.85e-09;3!CL:0002581;7.47e-08;1!CL:0002032;2.13e-07;1!CL:0000037;2.13e-07;1!CL:0000222;2.13e-07;1!CL:0001024;2.13e-07;1!CL:0000557;2.13e-07;1!CL:0002566;2.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.13e-08,3;CL:0002581,6.59e-08,1;CL:0001024,2.66e-07,1;CL:0002566,4.61e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;2.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.61e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004765;1.42e-10;26!UBERON:0002242;4.85e-09;3!UBERON:0002371;2.90e-08;12!UBERON:0001474;3.05e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,1.13e-08,3;UBERON:0003068,1.13e-08,3;UBERON:0002328,1.13e-08,3;UBERON:0004880,1.13e-08,3 | |||
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| ||
|short_description=p16@SH3KBP1 | |||
}} | }} |
Latest revision as of 15:49, 24 September 2015
Short description: | p16@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SH3KBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -269bp_to_NM_031892, uc004czm.2_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | Q5JPT6Q96B97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.13e-08 | 3 |
perirenal preadipocyte | 6.59e-08 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.66e-07 | 1 |
dark melanocyte | 4.61e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 1.13e-08 | 3 |
axial mesoderm | 1.13e-08 | 3 |
notochord | 1.13e-08 | 3 |
chordamesoderm | 1.13e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.61e-07 | 1 |