FFCP PHASE1:Hg19::chr17:41003302..41003317,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8639 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=550 | |||
|TSSclassifier=strong | |||
|UniProt=Q16853 | |||
|association_with_transcript=101bp_to_ENST00000308423,NM_003734,uc002ibv.2_5end | |||
|cluster_id=chr17:41003302..41003317,+ | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_3_at_AOC3_5end | |||
|id=chr17:41003302..41003317,+ | |||
|ontology_enrichment_celltype=CL:0000136!9.41e-31!15;CL:0002521!3.32e-11!3;CL:0002615!4.62e-11!3;CL:0000325!5.26e-10!39;CL:0002617!8.98e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.85e-84;13!CL:0002521;1.97e-28;3!CL:0002615;3.59e-28;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.70e-73,15;CL:0002521,1.42e-28,3;CL:0002615,3.59e-28,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.19e-10;1!UBERON:0006242;3.15e-10;1 | |||
|ontology_enrichment_disease=DOID:114!6.59e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-28!115;UBERON:0002190!3.32e-11!3;UBERON:0002072!7.58e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.97e-28;3!UBERON:0002072;2.53e-17;5!UBERON:0003688;2.09e-14;6!UBERON:0002358;2.09e-14;6!UBERON:0003684;2.09e-14;6!UBERON:0001178;2.09e-14;6!UBERON:0001013;1.01e-10;14!UBERON:0002171;1.73e-10;1!UBERON:0006518;1.73e-10;1!UBERON:0008949;1.73e-10;1!UBERON:0000101;1.73e-10;1!UBERON:0002167;1.73e-10;1!UBERON:0004457;8.75e-10;9!UBERON:0000042;8.75e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.42e-28,3;UBERON:0002072,2.08e-17,5;UBERON:0003688,2.09e-14,6;UBERON:0002358,2.09e-14,6;UBERON:0003684,2.09e-14,6;UBERON:0001178,2.09e-14,6;UBERON:0001013,8.20e-11,14;UBERON:0002171,1.73e-10,1;UBERON:0006518,1.73e-10,1;UBERON:0008949,1.73e-10,1;UBERON:0000101,1.73e-10,1;UBERON:0002167,1.73e-10,1;UBERON:0004457,1.86e-07,12;UBERON:0000042,1.86e-07,12 | |||
|phase1_expression=0.908391896352783,10.9191267184401,2.25527046553554,2.00146596706261,6.25745532198203,0,17.7309914717817,1.89515962028049,15.6711376919903,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,1.479651084554,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28144895081234,1.72924735609633,2.07119527673598,0,0,0,0,4.89616023032527,8.5234563967718,3.982492497925,4.59021682993726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,1.1436247068265,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0.196308467114945,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0,0.213233981900981,0,0,0.186224142887574,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,4.69281884806909,0.611207220914332,0,0,0.402547587182052,0 | |||
|short_description=p3@AOC3 | |||
}} |
Latest revision as of 16:32, 24 September 2015
Short description: | p3@AOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AOC3_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | 101bp_to_ENST00000308423, NM_003734, uc002ibv.2_5end |
EntrezGene: | AOC3 |
HGNC: | 550 |
UniProt: | Q16853 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.70e-73 | 15 |
subcutaneous fat cell | 1.42e-28 | 3 |
adipocyte of omentum tissue | 3.59e-28 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.42e-28 | 3 |
hypodermis | 2.08e-17 | 5 |
omentum | 2.09e-14 | 6 |
peritoneum | 2.09e-14 | 6 |
abdominal cavity | 2.09e-14 | 6 |
visceral peritoneum | 2.09e-14 | 6 |
adipose tissue | 8.20e-11 | 14 |
lower lobe of right lung | 1.73e-10 | 1 |
right lung lobe | 1.73e-10 | 1 |
lower lobe of lung | 1.73e-10 | 1 |
lobe of lung | 1.73e-10 | 1 |
right lung | 1.73e-10 | 1 |
cavity lining | 1.86e-07 | 12 |
serous membrane | 1.86e-07 | 12 |