FFCP PHASE1:Hg19::chr12:71551758..71551770,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7103 | |EntrezGene=7103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |HGNC=11855 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000552786_5end | |association_with_transcript=-5bp_to_ENST00000552786_5end | ||
|cluster_id=chr12:71551758..71551770,- | |||
|description=CAGE_peak_5_at_TSPAN8_5end | |description=CAGE_peak_5_at_TSPAN8_5end | ||
|id=chr12:71551758..71551770,- | |id=chr12:71551758..71551770,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.02e-11;4!CL:0002547;1.02e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.28e-11,4;CL:0002547,1.28e-11,4;CL:0000359,5.00e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.47e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.90e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.87e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!6.49e-18!129;UBERON:0004185!6.49e-18!129;UBERON:0001007!6.60e-15!155;UBERON:0001555!6.60e-15!155;UBERON:0007026!6.60e-15!155;UBERON:0000077!1.02e-13!130;UBERON:0004119!2.38e-13!169;UBERON:0000925!2.38e-13!169;UBERON:0006595!2.38e-13!169;UBERON:0003104!4.99e-13!238;UBERON:0009142!4.99e-13!238;UBERON:0007023!2.21e-12!115;UBERON:0000481!9.36e-11!347;UBERON:0001041!5.96e-10!98;UBERON:0005409!7.16e-10!35;UBERON:0004573!2.75e-09!33;UBERON:0004571!2.75e-09!33;UBERON:0001637!6.09e-09!42;UBERON:0003509!6.09e-09!42;UBERON:0004572!6.09e-09!42;UBERON:0004111!1.77e-08!241;UBERON:0000160!2.93e-08!27;UBERON:0003914!3.74e-08!118;UBERON:0000477!7.10e-08!286;UBERON:0000926!1.67e-07!448;UBERON:0004120!1.67e-07!448;UBERON:0006603!1.67e-07!448;UBERON:0000059!1.75e-07!11;UBERON:0000025!2.78e-07!194;UBERON:0004907!4.22e-07!5;UBERON:0001048!6.32e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.33e-19;22!UBERON:0004921;2.91e-18;33!UBERON:0000160;6.54e-15;17!UBERON:0004573;2.53e-13;33!UBERON:0004571;2.53e-13;33!UBERON:0001637;1.52e-12;42!UBERON:0003509;1.52e-12;42!UBERON:0004572;1.52e-12;42!UBERON:0004797;1.02e-11;4!UBERON:0000415;1.02e-11;4!UBERON:0007240;1.02e-11;4!UBERON:0005742;1.02e-11;4!UBERON:0005734;1.02e-11;4!UBERON:0004664;1.02e-11;4!UBERON:0004663;1.02e-11;4!UBERON:0000059;1.64e-09;11!UBERON:0001155;2.72e-08;9!UBERON:0003127;3.19e-07;2!UBERON:0001041;3.44e-07;14!UBERON:0000947;3.89e-07;21!UBERON:0010191;3.89e-07;21!UBERON:0001555;5.60e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.99e-17,25;UBERON:0004573,9.18e-16,33;UBERON:0004571,9.18e-16,33;UBERON:0004921,1.45e-15,118;UBERON:0001637,4.25e-15,42;UBERON:0003509,4.25e-15,42;UBERON:0004572,4.25e-15,42;UBERON:0000160,6.76e-15,17;UBERON:0001007,2.84e-12,145;UBERON:0001555,2.84e-12,145;UBERON:0007026,2.84e-12,145;UBERON:0000415,1.28e-11,4;UBERON:0007240,1.28e-11,4;UBERON:0005742,1.28e-11,4;UBERON:0005734,1.28e-11,4;UBERON:0004664,1.28e-11,4;UBERON:0004663,1.28e-11,4;UBERON:0004119,2.16e-10,160;UBERON:0000925,2.16e-10,160;UBERON:0006595,2.16e-10,160;UBERON:0007500,1.42e-09,59;UBERON:0001981,1.42e-09,59;UBERON:0004537,1.42e-09,59;UBERON:0006965,1.42e-09,59;UBERON:0000059,1.62e-09,11;UBERON:0001155,2.68e-08,9;UBERON:0000055,8.51e-08,68;UBERON:0001041,2.65e-07,87;UBERON:0003127,3.24e-07,2;UBERON:0000947,4.02e-07,21;UBERON:0010191,4.02e-07,21 | |||
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| ||
|short_description=p5@TSPAN8 | |short_description=p5@TSPAN8 | ||
}} | }} |
Latest revision as of 16:38, 24 September 2015
Short description: | p5@TSPAN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TSPAN8_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000552786_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.28e-11 | 4 |
fibroblast of the aortic adventitia | 1.28e-11 | 4 |
vascular associated smooth muscle cell | 5.00e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.99e-17 | 25 |
systemic artery | 9.18e-16 | 33 |
systemic arterial system | 9.18e-16 | 33 |
subdivision of digestive tract | 1.45e-15 | 118 |
artery | 4.25e-15 | 42 |
arterial blood vessel | 4.25e-15 | 42 |
arterial system | 4.25e-15 | 42 |
intestine | 6.76e-15 | 17 |
digestive system | 2.84e-12 | 145 |
digestive tract | 2.84e-12 | 145 |
primitive gut | 2.84e-12 | 145 |
artery wall | 1.28e-11 | 4 |
tunica adventitia of artery | 1.28e-11 | 4 |
adventitia | 1.28e-11 | 4 |
tunica adventitia of blood vessel | 1.28e-11 | 4 |
aorta tunica adventitia | 1.28e-11 | 4 |
aorta wall | 1.28e-11 | 4 |
endoderm-derived structure | 2.16e-10 | 160 |
endoderm | 2.16e-10 | 160 |
presumptive endoderm | 2.16e-10 | 160 |
epithelial tube open at both ends | 1.42e-09 | 59 |
blood vessel | 1.42e-09 | 59 |
blood vasculature | 1.42e-09 | 59 |
vascular cord | 1.42e-09 | 59 |
large intestine | 1.62e-09 | 11 |
colon | 2.68e-08 | 9 |
vessel | 8.51e-08 | 68 |
foregut | 2.65e-07 | 87 |
open tracheal system trachea | 3.24e-07 | 2 |
aorta | 4.02e-07 | 21 |
aortic system | 4.02e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.87e-07 | 2 |