FFCP PHASE1:Hg19::chr22:39712867..39712899,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116936 | |EntrezGene=116936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_NR_000026_5end | |association_with_transcript=1bp_to_NR_000026_5end | ||
|cluster_id=chr22:39712867..39712899,- | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_1_at_RNU86_5end | |description=CAGE_peak_1_at_RNU86_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;9.72e-14;1!CL:0000819;9.72e-14;1!CL:0000540;2.40e-09;6!CL:0000404;2.40e-09;6 | |ontology_enrichment_celltype_v019=CL:0000785;9.72e-14;1!CL:0000819;9.72e-14;1!CL:0000540;2.40e-09;6!CL:0000404;2.40e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.73e-14,1;CL:0000540,2.66e-09,6;CL:0000031,2.66e-09,6;CL:0000404,2.66e-09,6;CL:0000785,1.64e-07,2;CL:0000955,1.64e-07,2;CL:0000818,1.64e-07,2;CL:0000954,1.64e-07,2;CL:0000816,1.64e-07,2;CL:0000047,3.45e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;2.40e-09;6!CL:0000954;1.64e-07;2 | |ontology_enrichment_development_v019=CL:0000031;2.40e-09;6!CL:0000954;1.64e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;9.72e-14;1!DOID:8675;9.72e-14;1 | |ontology_enrichment_disease_v019=DOID:0060073;9.72e-14;1!DOID:8675;9.72e-14;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.73e-14,1;DOID:8675,9.73e-14,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RNU86 | |short_description=p1@RNU86 | ||
}} | }} |
Latest revision as of 18:21, 24 September 2015
Short description: | p1@RNU86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNU86_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 1bp_to_NR_000026_5end |
EntrezGene: | RNU86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.73e-14 | 1 |
neuron | 2.66e-09 | 6 |
neuroblast | 2.66e-09 | 6 |
electrically signaling cell | 2.66e-09 | 6 |
mature B cell | 1.64e-07 | 2 |
pre-B-II cell | 1.64e-07 | 2 |
transitional stage B cell | 1.64e-07 | 2 |
small pre-B-II cell | 1.64e-07 | 2 |
immature B cell | 1.64e-07 | 2 |
neuronal stem cell | 3.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.73e-14 | 1 |
lymphosarcoma | 9.73e-14 | 1 |