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FFCP PHASE1:Hg19::chrX:2418949..2419024,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=207063,9189|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18399,447|TSSclassifier=S|UniProt=Q8N5I4,O96006,E2QRC8,C9JB06|association_with_transcript=0bp_to_ENST00000334651,ENST00000381222,ENST00000381223,ENST00000412516,ENST00000430536,NM_001171136,NM_004729,NM_145177,uc004cqf.3,uc004cqg.2_5end|description=CAGE_peak_1_at_DHRSX_5end,CAGE_peak_1_at_ZBED1_5end|id=chrX:2418949..2419024,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000136;8.42e-08;13|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!4.22e-09!41;UBERON:0003134!5.07e-08!37;UBERON:0000474!5.07e-08!37;UBERON:0005795!7.95e-07!22|ontology_enrichment_uberon_v019=UBERON:0003134;3.48e-07;33!UBERON:0003100;4.69e-07;41!UBERON:0000474;7.33e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.97e-09,41;UBERON:0003134,4.81e-08,37;UBERON:0000474,4.81e-08,37;UBERON:0005795,7.65e-07,22|phase1_expression=33.9738569235941,35.1124859181212,35.5205098321847,39.0285863577209,0,0,40.5279805069297,20.8467558230854,24.0290777943851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8144796922543,25.5332833189331,23.1409697062217,0,0,0,0,34.6386806594988,0,0,0,0,0,0,0,0,61.5397965436061,0,28.061860084456,0,29.5952554649136,0,0,31.2803434604055,17.8369283239733,0,20.5739540003069,32.7508396699788,0,20.3139729891513,35.9542868526375,0,15.955367395601,37.0361509768792,0,26.8521592835597,30.6761709173646,0,29.4095077867559,30.4719700560013,0,33.632401445761,18.0899038984855,0,16.723541042294,33.9023721474687,0,25.9499157701525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6537214189602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.3048460164759,42.4876559010212,0,17.6483061985953,0,13.3724700478643,0,38.7105567797756,37.8383146752278,0,33.1404554605826,0,0,0,0,0,37.8659558082598,29.650612123022,43.9311703586705,23.5304371421356,0,0,0,0,0,0,39.7547784328984,0,0,0,42.2426158941021,21.9070785179723,12.3140538156293,13.1944845544454,20.5707661675047,0,21.349799145941,37.4934673594083,0,0,0,0,0,0,0,25.1007601479558,33.6259531241552,0,0,0,0,0,0,0,0,0,0,0,0,0,24.5827467693269,0,0,0,6.09924761342131,21.3557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7195621010264,34.9115034356268,0,29.3956631772325,29.4216085673697,25.097891659816,23.4273984334737,20.1856680700503,24.0885056990048,0,21.2269509603652,33.1523811245953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4803506515239,27.4444094683752,0,0,0,0,0,0,0,0,0,12.6432703673484,10.3018339451385,0,0,49.1969147175691,0,19.4859268710677,0,11.7321664740731,11.9159914790724,25.3032568249039,8.37527504423104,19.8108976529759,23.2207489405665,26.3739514753039,24.2385472178649,0,0,0,0,0,0,0,0,0,0,35.5497218333889,0,0,29.5191309409206,44.7231978718874,0,0,0,0,0,0,0,0,0,36.4741646242099,31.3752045096106,32.5911951253506,0,0,0,20.3681127167845,19.5265290917994,35.6592262601796,22.7306651468099,0,25.6057177433051,19.5028150548737,0,0,0,0,0,0,0,0,0,0,89.0993353887476,0,0,0,0,29.4407831515317,0,0,31.2983943716828,0,0,0,35.0301420229236,0,0,0,0,0,0,0,38.2801510874143,0,32.9983384398973,16.7273550883988,37.8891127484649,34.4694311497836,35.3078001856025,0,38.5886972756977,20.6640989695558,31.9611105563629,19.5462631312866,0,24.0555483412116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5260883453125,22.2775649785588,0,0,0,0,0,0,0,0,0,0,0,20.3300445894003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7208247912775,0,0,0,0,0,0,0,37.2926784846801,36.9414780175903,0,0,0,0,25.9725282512261,38.418113764369,33.2400810988045,0,0,0,17.3832921394593,0,0,0,0,26.1724146613393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.55656842326024,0,0,0,0,0,0,0,0,0,0,8.7740741632893,0,18.9606791137796,0,0,19.588926933755,0,0,0,0,0,0,0,0,21.3166059518605,0,0,0,10.0729233052096,0,25.8563893593836,0,0,0,5.96488588659779,16.176982887209,0,0,0,0,0,12.5966373927138,13.6017347727866,0,20.5286127856793,0,0,0,0,0,0,0,0,0,16.6673767094549,5.68489999975272,48.5749715541312,0,0,0,0,0,12.6746246301303,16.8290863304629,19.1748337414399,12.2065389053667,17.9138401088584,0,0,23.9664619741778,33.3222748825862,23.8545801361771,0,0,0,0,0,0,0,0,32.0239723045851,0,4.51191321234361,3.92125068635479,6.37722030508202,9.67744036893344,0,11.3938954845135,9.63073568138972,0,10.8194319871046,54.7394062093178,0,51.3265321744245,0,0,0,0,0,0,0,0,0,0,62.9151723453052,0,26.7911097624789,0,0,0,0,0,0,20.7764968601749,20.6625262789577,14.2318985434807,16.854692355273,7.31297335275381,0,0,13.7393990430501,17.1029001981674,18.7223242081317,0,11.473296469895,32.3152459316161,0,0,0,33.2437350649165,6.01191151886503,0,0,20.7490200701913,0,0,0,0,49.0243592002934,0,0,0,0,21.6151303935524,21.9048606227189,0,27.9347536922972,0,0,0,0,57.3078731432105,61.8085509316662,0,0,46.1183850934277,0,0,0,0,0,0,10.3379859675209,21.9287483839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{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=207063,9189
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=18399,447
|TSSclassifier=strong
|UniProt=Q8N5I4,O96006,E2QRC8,C9JB06
|association_with_transcript=0bp_to_ENST00000334651,ENST00000381222,ENST00000381223,ENST00000412516,ENST00000430536,NM_001171136,NM_004729,NM_145177,uc004cqf.3,uc004cqg.2_5end
|cluster_id=chrX:2418949..2419024,-
|description=CAGE_peak_1_at_DHRSX_5end,CAGE_peak_1_at_ZBED1_5end
|id=chrX:2418949..2419024,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000136;8.42e-08;13
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003100!4.22e-09!41;UBERON:0003134!5.07e-08!37;UBERON:0000474!5.07e-08!37;UBERON:0005795!7.95e-07!22
|ontology_enrichment_uberon_v019=UBERON:0003134;3.48e-07;33!UBERON:0003100;4.69e-07;41!UBERON:0000474;7.33e-07;37
|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.97e-09,41;UBERON:0003134,4.81e-08,37;UBERON:0000474,4.81e-08,37;UBERON:0005795,7.65e-07,22
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|short_description=p1@DHRSX,p1@ZBED1
}}

Latest revision as of 18:34, 24 September 2015

Short description:p1@DHRSX, p1@ZBED1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_DHRSX_5end, CAGE_peak_1_at_ZBED1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000334651, ENST00000381222, ENST00000381223, ENST00000412516, ENST00000430536, NM_001171136, NM_004729, NM_145177, uc004cqf.3, uc004cqg.2_5end
EntrezGene:207063,9189
HGNC: 447&submit=Submit 18399, 447
UniProt: Q8N5I4O96006E2QRC8C9JB06
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data