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FFCP PHASE1:Hg19::chr7:102553470..102553487,+: Difference between revisions

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(Created page with "{{FFCP |id=chr7:102553470..102553487,+ |short_description=p2@LRRC17 |description=CAGE_peak_2_at_LRRC17_5end |association_with_transcript=18bp_to_ENST00000249377_5end |Ent...")
 
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{{FFCP
{{FFCP
|id=chr7:102553470..102553487,+
|DHSsupport=supported 
|short_description=p2@LRRC17
|DPIdataset=robust
|description=CAGE_peak_2_at_LRRC17_5end
|association_with_transcript=18bp_to_ENST00000249377_5end
|EntrezGene=10234
|EntrezGene=10234
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=16895
|HGNC=16895
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=18bp_to_ENST00000249377_5end
|cluster_id=chr7:102553470..102553487,+
|coexpression_cluster_id=C4637
|description=CAGE_peak_2_at_LRRC17_5end
|id=chr7:102553470..102553487,+
|ontology_enrichment_celltype=CL:0000055!8.95e-39!180;CL:0000680!4.17e-32!57;CL:0000056!4.17e-32!57;CL:0000355!4.17e-32!57;CL:0000183!1.19e-30!59;CL:0000187!3.29e-30!54;CL:0000393!3.35e-27!60;CL:0000211!3.35e-27!60;CL:0000192!4.84e-24!42;CL:0000514!4.84e-24!42;CL:0000359!3.06e-19!32;CL:0000222!9.11e-17!119;CL:0002494!7.54e-11!16;CL:0000057!5.93e-09!75;CL:0000220!9.08e-09!246;CL:0002321!2.12e-08!248;CL:0002539!4.40e-08!10;CL:0002371!1.62e-07!591;CL:0000243!7.06e-07!15;CL:0000125!7.06e-07!15;CL:0000030!7.06e-07!15;CL:0000339!7.06e-07!15;CL:0000048!8.67e-07!430
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|ontology_enrichment_celltype_v019_2=CL:0000680,7.49e-40,58;CL:0000056,7.49e-40,58;CL:0000355,7.49e-40,58;CL:0000187,1.64e-37,55;CL:0000393,1.40e-33,61;CL:0000211,1.40e-33,61;CL:0000192,6.56e-30,43;CL:0000514,6.56e-30,43;CL:0000359,2.93e-23,32;CL:0000222,2.33e-16,121;CL:0002494,5.90e-13,16;CL:0000048,7.64e-12,427;CL:0000723,5.00e-11,433;CL:0000034,5.36e-10,441;CL:0002539,1.45e-09,10;CL:0002321,2.81e-08,250;CL:0000243,2.65e-07,15;CL:0000125,2.65e-07,15;CL:0000030,2.65e-07,15;CL:0000339,2.65e-07,15
|ontology_enrichment_development_v019=CL:0000514;1.45e-21;43!CL:0000355;1.48e-20;58!CL:0000339;2.58e-07;15
|ontology_enrichment_disease=DOID:2394!6.27e-08!14
|ontology_enrichment_disease_v019=DOID:2394;1.32e-09;14
|ontology_enrichment_disease_v019_2=DOID:2394,1.33e-09,14
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|ontology_enrichment_uberon_v019=UBERON:0002385;9.38e-16;31!UBERON:0001015;9.38e-16;31!UBERON:0000383;9.38e-16;31!UBERON:0004573;6.86e-15;33!UBERON:0004571;6.86e-15;33!UBERON:0000948;4.12e-12;22!UBERON:0001637;7.50e-12;42!UBERON:0003509;7.50e-12;42!UBERON:0004572;7.50e-12;42!UBERON:0001135;1.49e-10;15!UBERON:0007100;9.53e-10;25!UBERON:0004237;1.41e-09;10!UBERON:0004695;1.41e-09;10!UBERON:0002111;1.41e-09;10!UBERON:0004178;1.41e-09;10!UBERON:0002049;1.63e-08;75!UBERON:0007798;1.63e-08;75!UBERON:0000947;3.07e-08;21!UBERON:0010191;3.07e-08;21!UBERON:0007500;4.59e-08;56!UBERON:0001981;4.59e-08;56!UBERON:0004537;4.59e-08;56!UBERON:0006876;2.00e-07;11!UBERON:0001134;2.02e-07;16!UBERON:0002036;2.02e-07;16
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|short_description=p2@LRRC17
}}
}}

Latest revision as of 19:15, 24 September 2015

Short description:p2@LRRC17
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_LRRC17_5end
Coexpression cluster:C4637_Smooth_leiomyoma_mesenchymal_Iris_glioblastoma_Lens_Ciliary
Association with transcript: 18bp_to_ENST00000249377_5end
EntrezGene:LRRC17
HGNC: 16895
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data