FFCP PHASE1:Hg19::chr11:104035088..104035119,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80310 | |EntrezGene=80310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30620 | |HGNC=30620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000302251_5end | |association_with_transcript=0bp_to_ENST00000302251_5end | ||
|cluster_id=chr11:104035088..104035119,- | |||
|coexpression_cluster_id=C1327 | |||
|description=CAGE_peak_5_at_PDGFD_5end | |description=CAGE_peak_5_at_PDGFD_5end | ||
|id=chr11:104035088..104035119,- | |id=chr11:104035088..104035119,- | ||
|ontology_enrichment_celltype=CL:0000136!3.10e-08!15 | |ontology_enrichment_celltype=CL:0000136!3.10e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.29e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.55e-14,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-09!115;UBERON:0000468!7.75e-09!659;UBERON:0000924!9.35e-09!173;UBERON:0006601!9.35e-09!173;UBERON:0005743!1.08e-08!86;UBERON:0004121!2.01e-08!169;UBERON:0000073!9.27e-08!94;UBERON:0001016!9.27e-08!94;UBERON:0002346!1.20e-07!90;UBERON:0001017!1.25e-07!82;UBERON:0003075!2.50e-07!86;UBERON:0007284!2.50e-07!86;UBERON:0000475!3.96e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!1.79e-09!115;UBERON:0000468!7.75e-09!659;UBERON:0000924!9.35e-09!173;UBERON:0006601!9.35e-09!173;UBERON:0005743!1.08e-08!86;UBERON:0004121!2.01e-08!169;UBERON:0000073!9.27e-08!94;UBERON:0001016!9.27e-08!94;UBERON:0002346!1.20e-07!90;UBERON:0001017!1.25e-07!82;UBERON:0003075!2.50e-07!86;UBERON:0007284!2.50e-07!86;UBERON:0000475!3.96e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.57e-09;9!UBERON:0000042;1.57e-09;9!UBERON:0003688;1.14e-07;6!UBERON:0002358;1.14e-07;6!UBERON:0003684;1.14e-07;6!UBERON:0001178;1.14e-07;6!UBERON:0004905;4.98e-07;8!UBERON:0000982;4.98e-07;8!UBERON:0004770;4.98e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.16e-08,6;UBERON:0002358,8.16e-08,6;UBERON:0003684,8.16e-08,6;UBERON:0001178,8.16e-08,6;UBERON:0004905,3.16e-07,8;UBERON:0000982,3.16e-07,8;UBERON:0004770,3.16e-07,8;UBERON:0004457,7.21e-07,12;UBERON:0000042,7.21e-07,12 | |||
|phase1_expression=2.18014055124668,2.35510576280081,3.80576891059122,3.00219895059391,3.12872766099101,6.97870819280295,0,1.26343974685366,1.56711376919903,0.245733936501509,0.697801167972428,0,0.527533956456907,1.36142988256051,1.98838425436749,0,0.602694528023977,0,0,0.123121058076788,0,0.940364164434263,2.57612388417951,1.50561867580173,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.40648818027883,0,0,0.144846518960824,0.795285947051099,0,0.378139268656271,0.221729397462564,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,1.55050055501597,1.42306505074684,1.00416183829401,0.402829317109147,1.52054421143703,0.488124115096339,0.367663080345869,0.81014194788176,0.535798369704479,0,0.563057402416611,0,0,0.549605231791222,0,0,0,0,0.25326102332916,0.264818361626438,0.860509862246441,1.41867352879343,0,0,0,4.35695449559673,0,0.653847612453835,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0.413303124703062,2.37600571456411,1.7308685049499,0,0,0,0.125118519871964,0.277064115484183,0,0,1.20190447125277,0,0.179389635688862,1.2813443329114,3.17897851739343,0,0.92747276314595,1.28820270022815,0.558350568994769,0.675105328965065,0.779496041289589,0.504867548488229,1.28869858099219,2.42469085228218,0.355009592516614,0.10075209822764,0.339121184620975,0.193260853163297,0.545492241181669,0,0.609868530647977,0.530119073285941,0.232387885739037,0.518305275076852,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,0,0,0,0,0,0.514703430895577,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0.939269553886573,0.433099343283221,0,1.33177906564219,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857479297891735,0,0,0,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,0,0,1.85871391755592,0.542621605391443,0.823240336780769,0.325736184293735,0.355391948742546,0,6.63166629531089,0.871533458600294,2.39935178836937,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0.197030760201927,0,0,1.01637849688985,0,0,0.335032530668698,0.637938751653163,0,0,0,2.57652132610194,1.50051156317903,0.542530047399471,1.03985430765404,0,0.473107245101804,0.234282829985426,0.902838299183157,2.27407504055985,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,1.24053903909388,1.84154367945675,2.80660094433074,1.92208723883551,4.09365799253363,0.804269605718038,1.48418066444991,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0.34444334449382,0,0.917870904715969,0,0.0770153371044148,0,0,0.633309773357254,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,1.95227036798582,1.23649213977267,0.732555718546747,0.990113999047056,0,0,0,0,0.154048617114644,0,0.137836572484531,0.322260734604821,0,0,0.356128142586949,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.953150969619124,0,0.42793898803392,0.636406495851874,0,1.61885211824983,0.54907405947211,1.17812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0.491245205065606,0,0,0.211107635297664,3.29294892959902,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0.834245708559542,0,0,0,0,2.33150377598474,0,0,1.02555725490326,1.57768678274367,0.111443384277478,0,1.43246690842614,2.67268212749375,0.921482106297696,0,0,0,0,0,6.17668763578316,0,0,0,0,0,0.0898683511473268,0.716084698702437,0,0.789147245095469,0,0,1.93866549219044,0.278304294485554,0,0,0.0874599999961957,2.17499872630438,0,1.77977555204936,0,2.06846023944879,0,0,0,0.241192877250816,0,0,0,0.87754158861589,0,0.139423744278603,1.61595542857974,0.341826167541004,0.23056390438806,0,0,0.957003479195758,0.457987967009312,1.06606955203727,0,0,0.664846727600626,0,0,0,0.189753732724185,0.794682894901893,0.843992258112108,0.163232808159148,0,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0.123563938946503,0.104421949505455,0.269604531922708,0,0.234264445725339,0.182454789215666,0.19566461893209,0,1.57833761139756,2.41981432097328,0.91821828489147,0.947798694427319,0,0,0,0,0.313932918407225,0,1.70765727617876,0.832048038078832,0,0,0,0.873633341210151,0,0,0,0,0.969890164884194,3.44198894096851,2.93774963014692,0,0,0.633107959558787,2.15106521008283,1.12222348352147,2.56143593687223,0,0,0.343609788497747,0.514784993585894,0,0.372757606696298,0,6.65930609760709,4.28871669880566,8.56785028145103,0,0,0.136905378891993,0,3.0083580899397,0,1.95497680890578,1.83328339209347,2.15361907373044,0,0.429226048136571,2.90122894674434,2.08268764708851,0,0,0.0787831823072236,0,0,0.295282444544246,0,0.7952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| ||
|short_description=p5@PDGFD | |short_description=p5@PDGFD | ||
}} | }} |
Latest revision as of 20:01, 24 September 2015
Short description: | p5@PDGFD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PDGFD_5end |
Coexpression cluster: | C1327_Adipocyte_glioblastoma_Fibroblast_Cardiac_aorta_eye_Mesothelial |
Association with transcript: | 0bp_to_ENST00000302251_5end |
EntrezGene: | PDGFD |
HGNC: | 30620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.55e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.16e-08 | 6 |
peritoneum | 8.16e-08 | 6 |
abdominal cavity | 8.16e-08 | 6 |
visceral peritoneum | 8.16e-08 | 6 |
articulation | 3.16e-07 | 8 |
skeletal joint | 3.16e-07 | 8 |
articular system | 3.16e-07 | 8 |
cavity lining | 7.21e-07 | 12 |
serous membrane | 7.21e-07 | 12 |