FFCP PHASE1:Hg19::chr4:1165811..1165842,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:1165811..1165842,-
|short_description=p10@SPON2
|description=CAGE_peak_10_at_SPON2_5end
|association_with_transcript=243bp_to_ENST00000504909_5end
|Entrez...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=243bp_to_ENST00000504909_5end | |||
|cluster_id=chr4:1165811..1165842,- | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_10_at_SPON2_5end | |||
|id=chr4:1165811..1165842,- | |||
|ontology_enrichment_celltype=CL:0000136!1.52e-12!15;CL:0002334!2.70e-10!12;CL:0000048!5.21e-09!430;CL:0000723!6.83e-09!436;CL:0000034!2.91e-08!444;CL:0000055!5.52e-07!180;CL:0000057!6.59e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.70e-18;13!CL:0002615;6.47e-13;3!CL:0002622;8.03e-13;3!CL:0002521;1.68e-12;3!CL:0002504;2.83e-12;3!CL:1000279;2.83e-12;3!CL:1000280;2.83e-12;3!CL:0002561;1.92e-08;2!CL:0002617;1.92e-08;2!CL:0002598;1.92e-08;2!CL:0000134;1.28e-07;55!CL:0002559;2.35e-07;5!CL:0002334;2.89e-07;12!CL:0000048;5.62e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.76e-24,15;CL:0002615,8.06e-13,3;CL:0002622,9.81e-13,3;CL:0002504,1.62e-12,3;CL:1000279,1.62e-12,3;CL:1000280,1.62e-12,3;CL:0002521,2.21e-12,3;CL:0000048,5.19e-11,427;CL:0000723,1.03e-10,433;CL:0000034,2.51e-10,441;CL:0002617,1.05e-08,2;CL:0002561,1.37e-08,2;CL:0002598,3.51e-08,2;CL:0002559,1.75e-07,5;CL:0002334,2.19e-07,12;CL:0000134,3.04e-07,354;CL:0002320,6.13e-07,361;CL:0000192,6.15e-07,43;CL:0000514,6.15e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.54e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.39e-09!6;UBERON:0002358!2.39e-09!6;UBERON:0003684!2.39e-09!6;UBERON:0001178!2.39e-09!6;UBERON:0004457!4.59e-08!12;UBERON:0000042!4.59e-08!12;UBERON:0002100!6.17e-08!216;UBERON:0002072!8.74e-08!5;UBERON:0001155!3.28e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.82e-16;6!UBERON:0002358;4.82e-16;6!UBERON:0003684;4.82e-16;6!UBERON:0001178;4.82e-16;6!UBERON:0002072;1.40e-12;5!UBERON:0002190;1.68e-12;3!UBERON:0004457;1.36e-10;9!UBERON:0000042;1.36e-10;9!UBERON:0001013;4.12e-09;14!UBERON:0005933;1.92e-08;2!UBERON:0005942;1.92e-08;2!UBERON:0005932;1.92e-08;2!UBERON:0002073;2.35e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.62e-16,6;UBERON:0002358,4.62e-16,6;UBERON:0003684,4.62e-16,6;UBERON:0001178,4.62e-16,6;UBERON:0002072,1.82e-12,5;UBERON:0002190,2.21e-12,3;UBERON:0001013,5.70e-09,14;UBERON:0005933,1.37e-08,2;UBERON:0005942,1.37e-08,2;UBERON:0005932,1.37e-08,2;UBERON:0004457,7.24e-08,12;UBERON:0000042,7.24e-08,12;UBERON:0002073,1.75e-07,5;UBERON:0005086,1.75e-07,5;UBERON:0004923,4.97e-07,66 | |||
|phase1_expression=2.72517568905835,1.92690471501885,3.10099689011137,3.00219895059391,4.46961094427288,0,12.6649939084155,3.15859936713415,1.04474251279935,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,3.74592092196385,0.570471821544449,0.896692083310806,0,0,0.140450806702248,0,0,0.206651562351531,3.56400857184616,2.47266929278557,0,3.59309070908119,0,0,0.277064115484183,0,0.612975591598039,0.751190294532984,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,2.76269842704961,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0.763976851116555,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,2.19761916788222,0,0,5.05282421511254,1.04007436911366,0,0,0,0.57191197463259,4.88359444852299,1.64648067356154,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0.215627574859517,1.66845947163673,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0,0,0,0,0,0,0,1.56390506042549,0.195801157462741,0,0,0,0.106727557803444,0,0,0,1.73675465473144,0,1.40330047216537,1.66580894032411,0.511707249066704,1.28683136914886,0,0.308419387605311,1.24293207719189,0.821271560138091,0.519254429183621,0.581051892299796,0,0,0,2.29628896329214,3.09554985611419,12.4568194211453,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.429680979473094,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09693213316207,1.02359116524534,2.1396949401696,0,0,1.79872457583315,5.21620356498504,2.5918728516051,0,0,0,2.43816869544795,0,0,0.682499557039929,10.322596532621,0,0,0,0,2.31510213706675,0,0,0,0,0.143411352204052,0.392996164052485,0,1.06428319221179,0.211107635297664,0.329294892959902,0.379473173765715,1.74967360122491,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0.23056390438806,0,0,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0.233713309847224,1.10961172300523,0,0,0.889811221596536,0.228840068396924,1.20984739010591,0,0,0.159296767163702,0,0.310525913752519,0,1.32920857278997,3.1304703708704,0.751288044986092,1.14241563650639,0,0.727394636810238,0.214821114084977,1.39210127963548,2.3885753321917,0,1.03018711554838,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,3.062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=2.72517568905835,1.92690471501885,3.10099689011137,3.00219895059391,4.46961094427288,0,12.6649939084155,3.15859936713415,1.04474251279935,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,3.74592092196385,0.570471821544449,0.896692083310806,0,0,0.140450806702248,0,0,0.206651562351531,3.56400857184616,2.47266929278557,0,3.59309070908119,0,0,0.277064115484183,0,0.612975591598039,0.751190294532984,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,2.76269842704961,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0.763976851116555,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,2.19761916788222,0,0,5.05282421511254,1.04007436911366,0,0,0,0.57191197463259,4.88359444852299,1.64648067356154,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0.215627574859517,1.66845947163673,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0,0,0,0,0,0,0,1.56390506042549,0.195801157462741,0,0,0,0.106727557803444,0,0,0,1.73675465473144,0,1.40330047216537,1.66580894032411,0.511707249066704,1.28683136914886,0,0.308419387605311,1.24293207719189,0.821271560138091,0.519254429183621,0.581051892299796,0,0,0,2.29628896329214,3.09554985611419,12.4568194211453,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.429680979473094,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09693213316207,1.02359116524534,2.1396949401696,0,0,1.79872457583315,5.21620356498504,2.5918728516051,0,0,0,2.43816869544795,0,0,0.682499557039929,10.322596532621,0,0,0,0,2.31510213706675,0,0,0,0,0.143411352204052,0.392996164052485,0,1.06428319221179,0.211107635297664,0.329294892959902,0.379473173765715,1.74967360122491,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0.23056390438806,0,0,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0.233713309847224,1.10961172300523,0,0,0.889811221596536,0.228840068396924,1.20984739010591,0,0,0.159296767163702,0,0.310525913752519,0,1.32920857278997,3.1304703708704,0.751288044986092,1.14241563650639,0,0.727394636810238,0.214821114084977,1.39210127963548,2.3885753321917,0,1.03018711554838,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,3.062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p10@SPON2 | |||
}} | }} |
Latest revision as of 20:29, 24 September 2015
Short description: | p10@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | 243bp_to_ENST00000504909_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.76e-24 | 15 |
adipocyte of omentum tissue | 8.06e-13 | 3 |
prostate stromal cell | 9.81e-13 | 3 |
enteric smooth muscle cell | 1.62e-12 | 3 |
smooth muscle cell of large intestine | 1.62e-12 | 3 |
smooth muscle cell of colon | 1.62e-12 | 3 |
subcutaneous fat cell | 2.21e-12 | 3 |
multi fate stem cell | 5.19e-11 | 427 |
somatic stem cell | 1.03e-10 | 433 |
stem cell | 2.51e-10 | 441 |
adipocyte of breast | 1.05e-08 | 2 |
outer root sheath cell | 1.37e-08 | 2 |
bronchial smooth muscle cell | 3.51e-08 | 2 |
hair follicle cell | 1.75e-07 | 5 |
preadipocyte | 2.19e-07 | 12 |
mesenchymal cell | 3.04e-07 | 354 |
connective tissue cell | 6.13e-07 | 361 |
smooth muscle cell | 6.15e-07 | 43 |
smooth muscle myoblast | 6.15e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.62e-16 | 6 |
peritoneum | 4.62e-16 | 6 |
abdominal cavity | 4.62e-16 | 6 |
visceral peritoneum | 4.62e-16 | 6 |
hypodermis | 1.82e-12 | 5 |
subcutaneous adipose tissue | 2.21e-12 | 3 |
adipose tissue | 5.70e-09 | 14 |
hair root sheath | 1.37e-08 | 2 |
hair outer root sheath | 1.37e-08 | 2 |
bulb of hair follicle | 1.37e-08 | 2 |
cavity lining | 7.24e-08 | 12 |
serous membrane | 7.24e-08 | 12 |
hair follicle | 1.75e-07 | 5 |
hair follicle placode | 1.75e-07 | 5 |
organ component layer | 4.97e-07 | 66 |