FFCP PHASE2:Hg19::chr22:41347274..41347309,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9978 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9928 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9928 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P62877 | ||
|association_with_transcript=-41bp_to_ENST00000476110,NM_014248_5end | |association_with_transcript=-41bp_to_ENST00000476110,NM_014248_5end | ||
|cluster_id=chr22:41347274..41347309,+ | |cluster_id=chr22:41347274..41347309,+ | ||
Latest revision as of 20:47, 24 September 2015
| Short description: | p2@RBX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_RBX1_5end |
| Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
| Association with transcript: | -41bp_to_ENST00000476110, NM_014248_5end |
| EntrezGene: | RBX1 |
| HGNC: | 9928 |
| UniProt: | P62877 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@RBX1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| erythroid lineage cell | 5.44e-19 | 2 |
| erythroblast | 5.44e-19 | 2 |
| megakaryocyte-erythroid progenitor cell | 5.44e-19 | 2 |
| erythroid progenitor cell | 5.44e-19 | 2 |
| reticulocyte | 5.44e-19 | 2 |
| proerythroblast | 5.44e-19 | 2 |
| basophilic erythroblast | 5.44e-19 | 2 |
| polychromatophilic erythroblast | 5.44e-19 | 2 |
| orthochromatic erythroblast | 5.44e-19 | 2 |
| androgen binding protein secreting cell | 1.73e-10 | 1 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 4.82e-49 | 15 |
| haemolymphatic fluid | 4.82e-49 | 15 |
| organism substance | 4.82e-49 | 15 |
| mesothelium | 1.73e-10 | 1 |
| seminiferous tubule of testis | 1.73e-10 | 1 |
| epithelium of male gonad | 1.73e-10 | 1 |
| epithelial cord | 1.73e-10 | 1 |
| sex cord | 1.73e-10 | 1 |
| seminiferous tubule epithelium | 1.73e-10 | 1 |
| testis sex cord | 1.73e-10 | 1 |
Showing 1 to 10 of 16 entries
