FFCP PHASE1:Hg19::chr2:220309797..220309812,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10290 | |EntrezGene=10290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |HGNC=16901 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-460bp_to_ENST00000497065_5end | |association_with_transcript=-460bp_to_ENST00000497065_5end | ||
|cluster_id=chr2:220309797..220309812,+ | |||
|coexpression_cluster_id=C1894 | |coexpression_cluster_id=C1894 | ||
|description=CAGE_peak_16_at_SPEG_5end | |description=CAGE_peak_16_at_SPEG_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!3.98e-07!19 | |ontology_enrichment_celltype=CL:0000077!3.98e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.15e-20;19!CL:0002097;4.18e-09;2 | |ontology_enrichment_celltype_v019=CL:0000077;2.15e-20;19!CL:0002097;4.18e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.24e-20,19;CL:0002097,4.34e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.93e-16;1!UBERON:0006965;4.88e-09;2 | |ontology_enrichment_development_v019=UBERON:0004874;1.93e-16;1!UBERON:0006965;4.88e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;1.93e-16;1!DOID:3307;6.93e-09;2 | |ontology_enrichment_disease_v019=DOID:5662;1.93e-16;1!DOID:3307;6.93e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,1.41e-16,1;DOID:3307,5.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-22!115;UBERON:0003075!2.93e-10!86;UBERON:0007284!2.93e-10!86;UBERON:0002346!1.44e-09!90;UBERON:0001950!2.08e-08!20;UBERON:0002780!8.09e-08!41;UBERON:0001890!8.09e-08!41;UBERON:0006240!8.09e-08!41;UBERON:0003080!1.42e-07!42;UBERON:0002619!1.54e-07!22;UBERON:0001869!2.25e-07!32;UBERON:0002791!4.28e-07!33;UBERON:0003056!4.35e-07!61;UBERON:0000007!7.62e-07!2;UBERON:0002020!7.84e-07!34;UBERON:0003528!7.84e-07!34;UBERON:0001893!7.84e-07!34;UBERON:0000073!8.38e-07!94;UBERON:0001016!8.38e-07!94;UBERON:0001049!9.52e-07!57;UBERON:0005068!9.52e-07!57;UBERON:0006241!9.52e-07!57;UBERON:0007135!9.52e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!1.36e-22!115;UBERON:0003075!2.93e-10!86;UBERON:0007284!2.93e-10!86;UBERON:0002346!1.44e-09!90;UBERON:0001950!2.08e-08!20;UBERON:0002780!8.09e-08!41;UBERON:0001890!8.09e-08!41;UBERON:0006240!8.09e-08!41;UBERON:0003080!1.42e-07!42;UBERON:0002619!1.54e-07!22;UBERON:0001869!2.25e-07!32;UBERON:0002791!4.28e-07!33;UBERON:0003056!4.35e-07!61;UBERON:0000007!7.62e-07!2;UBERON:0002020!7.84e-07!34;UBERON:0003528!7.84e-07!34;UBERON:0001893!7.84e-07!34;UBERON:0000073!8.38e-07!94;UBERON:0001016!8.38e-07!94;UBERON:0001049!9.52e-07!57;UBERON:0005068!9.52e-07!57;UBERON:0006241!9.52e-07!57;UBERON:0007135!9.52e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000989;1.93e-16;1!UBERON:0002146;1.93e-16;1!UBERON:0008811;1.93e-16;1!UBERON:0005623;1.93e-16;1 | |ontology_enrichment_uberon_v019=UBERON:0000989;1.93e-16;1!UBERON:0002146;1.93e-16;1!UBERON:0008811;1.93e-16;1!UBERON:0005623;1.93e-16;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.93e-16,1;UBERON:0008811,1.93e-16,1;UBERON:0006258,1.93e-16,1;UBERON:0005876,1.93e-16,1;UBERON:0004874,1.93e-16,1;UBERON:0002146,3.07e-16,1;UBERON:0005623,3.07e-16,1 | |||
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| ||
|short_description=p16@SPEG | |short_description=p16@SPEG | ||
}} | }} |
Latest revision as of 21:21, 24 September 2015
Short description: | p16@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SPEG_5end |
Coexpression cluster: | C1894_mesothelioma_Mesothelial_aorta_mesenchymal_pleomorphic_heart_leiomyoma |
Association with transcript: | -460bp_to_ENST00000497065_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.24e-20 | 19 |
cortical cell of adrenal gland | 4.34e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
penis | 1.93e-16 | 1 |
intromittent organ | 1.93e-16 | 1 |
lateral plate mesenchyme | 1.93e-16 | 1 |
undifferentiated genital tubercle | 1.93e-16 | 1 |
somatopleure | 1.93e-16 | 1 |
pulmonary valve | 3.07e-16 | 1 |
semi-lunar valve | 3.07e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.41e-16 | 1 |
teratoma | 5.49e-09 | 2 |