FFCP PHASE1:Hg19::chr20:24973265..24973274,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57136 | |EntrezGene=57136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13238 | |HGNC=13238 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_CU678464,HQ447266_5end | |association_with_transcript=50bp_to_CU678464,HQ447266_5end | ||
|cluster_id=chr20:24973265..24973274,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_4_at_C20orf3_5end | |description=CAGE_peak_4_at_C20orf3_5end | ||
|id=chr20:24973265..24973274,- | |id=chr20:24973265..24973274,- | ||
|ontology_enrichment_celltype=CL:0000791!2.23e-17!18;CL:0000789!2.23e-17!18;CL:0002420!2.23e-17!18;CL:0002419!2.23e-17!18;CL:0000790!2.23e-17!18;CL:0000625!1.11e-16!11;CL:0000084!3.22e-11!25;CL:0000827!3.22e-11!25;CL:0000738!1.62e-09!140;CL:0000094!1.28e-07!8;CL:0000838!2.71e-07!52;CL:0000542!4.69e-07!53;CL:0000051!4.69e-07!53 | |ontology_enrichment_celltype=CL:0000791!2.23e-17!18;CL:0000789!2.23e-17!18;CL:0002420!2.23e-17!18;CL:0002419!2.23e-17!18;CL:0000790!2.23e-17!18;CL:0000625!1.11e-16!11;CL:0000084!3.22e-11!25;CL:0000827!3.22e-11!25;CL:0000738!1.62e-09!140;CL:0000094!1.28e-07!8;CL:0000838!2.71e-07!52;CL:0000542!4.69e-07!53;CL:0000051!4.69e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.48e-33;3!CL:0000226;1.18e-31;3!CL:0000842;1.18e-31;3!CL:0000625;1.71e-15;11!CL:0000767;4.93e-15;3!CL:0000094;2.11e-12;8!CL:0000791;1.48e-09;18!CL:0000789;1.48e-09;18!CL:0002419;1.48e-09;18!CL:0000081;3.63e-09;11!CL:0000084;6.30e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.49e-33,3;CL:0000825,3.49e-33,3;CL:0000226,3.05e-31,3;CL:0000842,3.05e-31,3;CL:0000738,2.34e-17,136;CL:0000625,1.24e-15,11;CL:0000767,4.28e-15,3;CL:0000037,1.24e-13,168;CL:0000988,7.95e-13,177;CL:0000094,1.88e-12,8;CL:0002087,3.00e-11,115;CL:0000791,1.22e-09,18;CL:0000789,1.22e-09,18;CL:0002420,1.22e-09,18;CL:0002419,1.22e-09,18;CL:0000790,1.22e-09,18;CL:0000838,2.07e-09,52;CL:0000542,3.21e-09,53;CL:0000051,3.21e-09,53;CL:0000081,3.34e-09,11;CL:0002032,4.36e-09,161;CL:0000837,4.36e-09,161;CL:0002031,2.32e-07,120;CL:0000084,5.50e-07,25;CL:0000827,5.50e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.48e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.20e-17;15!UBERON:0000179;3.20e-17;15!UBERON:0000463;3.20e-17;15!UBERON:0002390;2.74e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.43e-17,15;UBERON:0000179,3.43e-17,15;UBERON:0000463,3.43e-17,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0.786728553697808,2.68680578668049,1.39334510984468,0,0,0.369754010166788,0,0,0,0,0.802177789880567,1.08505435357926,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.590129310341499,0,0.822405995998037,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0,0.766440987203842,0,0,0.637130828648193,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0.821127996921047,1.61285394579786,3.4767225451856,1.73789284659359,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0.358121926479791,0.112085143993527,5.12279976525011,4.52817907204986,7.05886699538616,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,1.24060815673732,1.07857100409308,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0,0.238231775457789,0,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0.415440338029185,3.59958226482401,0.77380195455795,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0,0,0.450772826991655,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0.786728553697808,2.68680578668049,1.39334510984468,0,0,0.369754010166788,0,0,0,0,0.802177789880567,1.08505435357926,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.590129310341499,0,0.822405995998037,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0,0.766440987203842,0,0,0.637130828648193,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0.821127996921047,1.61285394579786,3.4767225451856,1.73789284659359,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0.358121926479791,0.112085143993527,5.12279976525011,4.52817907204986,7.05886699538616,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,1.24060815673732,1.07857100409308,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0,0.238231775457789,0,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0.415440338029185,3.59958226482401,0.77380195455795,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0,0,0.450772826991655,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p4@C20orf3 | |short_description=p4@C20orf3 | ||
}} | }} |
Latest revision as of 22:21, 24 September 2015
Short description: | p4@C20orf3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C20orf3_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 50bp_to_CU678464, HQ447266_5end |
EntrezGene: | C20orf3 |
HGNC: | 13238 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.49e-33 | 3 |
pro-NK cell | 3.49e-33 | 3 |
single nucleate cell | 3.05e-31 | 3 |
mononuclear cell | 3.05e-31 | 3 |
leukocyte | 2.34e-17 | 136 |
CD8-positive, alpha-beta T cell | 1.24e-15 | 11 |
basophil | 4.28e-15 | 3 |
hematopoietic stem cell | 1.24e-13 | 168 |
hematopoietic cell | 7.95e-13 | 177 |
granulocyte | 1.88e-12 | 8 |
nongranular leukocyte | 3.00e-11 | 115 |
mature alpha-beta T cell | 1.22e-09 | 18 |
alpha-beta T cell | 1.22e-09 | 18 |
immature T cell | 1.22e-09 | 18 |
mature T cell | 1.22e-09 | 18 |
immature alpha-beta T cell | 1.22e-09 | 18 |
lymphoid lineage restricted progenitor cell | 2.07e-09 | 52 |
lymphocyte | 3.21e-09 | 53 |
common lymphoid progenitor | 3.21e-09 | 53 |
blood cell | 3.34e-09 | 11 |
hematopoietic oligopotent progenitor cell | 4.36e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 2.32e-07 | 120 |
T cell | 5.50e-07 | 25 |
pro-T cell | 5.50e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 3.43e-17 | 15 |
haemolymphatic fluid | 3.43e-17 | 15 |
organism substance | 3.43e-17 | 15 |