FFCP PHASE1:Hg19::chr4:120243283..120243299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2169 | |EntrezGene=2169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3556 | |HGNC=3556 | ||
|TSSclassifier=strong | |||
|UniProt=P12104 | |UniProt=P12104 | ||
|association_with_transcript=16bp_to_NM_000134,uc003icw.2_5end | |association_with_transcript=16bp_to_NM_000134,uc003icw.2_5end | ||
|cluster_id=chr4:120243283..120243299,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_FABP2_5end | |description=CAGE_peak_1_at_FABP2_5end | ||
|id=chr4:120243283..120243299,- | |id=chr4:120243283..120243299,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;7.79e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,8.74e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.41e-16;1!UBERON:0001045;1.65e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!8.07e-21!11;UBERON:0005409!9.49e-20!35;UBERON:0000160!9.74e-19!27;UBERON:0004907!9.77e-16!5;UBERON:0001155!2.02e-13!9;UBERON:0001052!1.88e-11!4;UBERON:0004921!6.34e-11!129;UBERON:0004185!6.34e-11!129;UBERON:0001007!1.90e-10!155;UBERON:0001555!1.90e-10!155;UBERON:0007026!1.90e-10!155;UBERON:0004119!3.64e-09!169;UBERON:0000925!3.64e-09!169;UBERON:0006595!3.64e-09!169;UBERON:0007023!9.73e-07!115 | |ontology_enrichment_uberon=UBERON:0000059!8.07e-21!11;UBERON:0005409!9.49e-20!35;UBERON:0000160!9.74e-19!27;UBERON:0004907!9.77e-16!5;UBERON:0001155!2.02e-13!9;UBERON:0001052!1.88e-11!4;UBERON:0004921!6.34e-11!129;UBERON:0004185!6.34e-11!129;UBERON:0001007!1.90e-10!155;UBERON:0001555!1.90e-10!155;UBERON:0007026!1.90e-10!155;UBERON:0004119!3.64e-09!169;UBERON:0000925!3.64e-09!169;UBERON:0006595!3.64e-09!169;UBERON:0007023!9.73e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.35e-53;17!UBERON:0005409;6.60e-53;22!UBERON:0000059;2.11e-34;11!UBERON:0004921;5.14e-33;33!UBERON:0002108;1.09e-28;4!UBERON:0004907;1.21e-27;5!UBERON:0001155;2.51e-27;9!UBERON:0001154;1.65e-16;1!UBERON:0001153;1.65e-16;1!UBERON:0009854;1.65e-16;1!UBERON:0007029;2.43e-16;1!UBERON:0001052;5.68e-16;4!UBERON:0001555;7.76e-15;54!UBERON:0000922;1.01e-11;49!UBERON:0001007;1.67e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.35e-53,17;UBERON:0005409,9.61e-47,25;UBERON:0000059,2.11e-34,11;UBERON:0002108,1.09e-28,4;UBERON:0004907,1.21e-27,5;UBERON:0001155,2.78e-27,9;UBERON:0001154,1.65e-16,1;UBERON:0001153,1.65e-16,1;UBERON:0001045,1.65e-16,1;UBERON:0007029,2.25e-16,1;UBERON:0001052,5.68e-16,4;UBERON:0004921,1.22e-09,118;UBERON:0001046,9.65e-08,19;UBERON:0001007,1.08e-07,145;UBERON:0001555,1.08e-07,145;UBERON:0007026,1.08e-07,145;UBERON:0004119,6.85e-07,160;UBERON:0000925,6.85e-07,160;UBERON:0006595,6.85e-07,160 | |||
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|short_description=p1@FABP2 | |short_description=p1@FABP2 | ||
}} | }} |
Latest revision as of 22:41, 24 September 2015
Short description: | p1@FABP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FABP2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 16bp_to_NM_000134, uc003icw.2_5end |
EntrezGene: | FABP2 |
HGNC: | 3556 |
UniProt: | P12104 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.35e-53 | 17 |
gastrointestinal system | 9.61e-47 | 25 |
large intestine | 2.11e-34 | 11 |
small intestine | 1.09e-28 | 4 |
lower digestive tract | 1.21e-27 | 5 |
colon | 2.78e-27 | 9 |
vermiform appendix | 1.65e-16 | 1 |
caecum | 1.65e-16 | 1 |
midgut | 1.65e-16 | 1 |
surface | 2.25e-16 | 1 |
rectum | 5.68e-16 | 4 |
subdivision of digestive tract | 1.22e-09 | 118 |
hindgut | 9.65e-08 | 19 |
digestive system | 1.08e-07 | 145 |
digestive tract | 1.08e-07 | 145 |
primitive gut | 1.08e-07 | 145 |
endoderm-derived structure | 6.85e-07 | 160 |
endoderm | 6.85e-07 | 160 |
presumptive endoderm | 6.85e-07 | 160 |