FFCP PHASE1:Hg19::chr1:2126174..2126190,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:2126174..2126190,- to FFCP PHASE1:Hg19::chr1:2126174..2126190,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=199990 | |EntrezGene=199990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26428 | |HGNC=26428 | ||
|TSSclassifier=strong | |||
|UniProt=A8MQT6,Q7Z4P6 | |UniProt=A8MQT6,Q7Z4P6 | ||
|association_with_transcript=0bp_to_ENST00000378543,ENST00000400918,ENST00000400919,ENST00000420515,ENST00000428120,ENST00000440825_5end | |||
|cluster_id=chr1:2126174..2126190,- | |||
|coexpression_cluster_id=C3937 | |||
|description=CAGE_peak_2_at_C1orf86_5end | |||
|id=chr1:2126174..2126190,- | |||
|ontology_enrichment_celltype=CL:0000055!2.03e-26!180;CL:0002321!7.13e-25!248;CL:0000220!7.14e-25!246;CL:0000222!2.84e-15!119;CL:0000183!7.40e-14!59;CL:0000192!1.44e-12!42;CL:0000514!1.44e-12!42;CL:0000548!2.28e-12!679;CL:0000004!2.28e-12!679;CL:0000255!2.28e-12!679;CL:0000680!3.56e-12!57;CL:0000056!3.56e-12!57;CL:0000355!3.56e-12!57;CL:0000144!6.62e-12!625;CL:0000012!9.25e-12!682;CL:0000187!1.57e-11!54;CL:0002371!1.66e-11!591;CL:0000393!2.37e-11!60;CL:0000211!2.37e-11!60;CL:0000359!5.31e-10!32;CL:0000066!1.74e-08!254;CL:0000057!8.02e-08!75;CL:0000221!3.19e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.14e-09;32!CL:0000192;1.64e-09;43!CL:0000187;5.10e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.15e-25,250;CL:0000222,1.00e-15,121;CL:0000192,1.24e-12,43;CL:0000514,1.24e-12,43;CL:0000680,2.60e-12,58;CL:0000056,2.60e-12,58;CL:0000355,2.60e-12,58;CL:0000187,1.15e-11,55;CL:0000393,1.71e-11,61;CL:0000211,1.71e-11,61;CL:0000359,5.26e-10,32;CL:0000066,2.25e-08,253;CL:0000057,3.80e-08,76;CL:0000221,1.45e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;1.64e-09;43!CL:0000355;4.52e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.28e-17!143;UBERON:0002100!1.37e-15!216;UBERON:0000486!3.71e-13!82;UBERON:0000475!7.82e-13!365;UBERON:0000119!9.70e-13!312;UBERON:0002049!1.01e-12!79;UBERON:0007798!1.01e-12!79;UBERON:0000490!1.25e-12!138;UBERON:0003914!1.83e-12!118;UBERON:0000483!2.02e-12!309;UBERON:0004290!6.43e-12!70;UBERON:0000914!8.78e-12!83;UBERON:0002329!8.78e-12!83;UBERON:0003077!8.78e-12!83;UBERON:0003059!8.78e-12!83;UBERON:0007282!8.78e-12!83;UBERON:0009618!8.78e-12!83;UBERON:0007285!8.78e-12!83;UBERON:0003104!5.99e-11!238;UBERON:0009142!5.99e-11!238;UBERON:0000481!1.00e-10!347;UBERON:0001134!1.56e-10!61;UBERON:0002036!1.56e-10!61;UBERON:0003082!1.56e-10!61;UBERON:0001981!5.18e-10!60;UBERON:0007500!5.18e-10!60;UBERON:0004537!5.18e-10!60;UBERON:0006965!5.18e-10!60;UBERON:0002385!6.71e-10!63;UBERON:0001015!6.71e-10!63;UBERON:0000383!6.71e-10!63;UBERON:0004872!1.87e-09!84;UBERON:0000055!3.54e-09!69;UBERON:0001637!5.09e-09!42;UBERON:0003509!5.09e-09!42;UBERON:0004572!5.09e-09!42;UBERON:0009569!2.00e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.56e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.57e-17,160;UBERON:0009142,1.57e-17,160;UBERON:0005256,1.82e-15,122;UBERON:0002100,2.74e-15,199;UBERON:0007503,1.21e-14,78;UBERON:0000490,3.43e-14,148;UBERON:0000486,2.78e-13,83;UBERON:0000119,9.65e-13,309;UBERON:0000483,2.01e-12,306;UBERON:0003914,2.17e-12,117;UBERON:0002049,2.40e-12,78;UBERON:0007798,2.40e-12,78;UBERON:0002329,4.86e-12,71;UBERON:0003059,4.86e-12,71;UBERON:0007282,4.86e-12,71;UBERON:0004290,4.86e-12,71;UBERON:0009618,4.86e-12,71;UBERON:0007524,6.72e-12,73;UBERON:0003077,1.70e-11,72;UBERON:0007285,1.70e-11,72;UBERON:0001134,1.19e-10,62;UBERON:0002036,1.19e-10,62;UBERON:0003082,1.19e-10,62;UBERON:0002385,5.10e-10,64;UBERON:0001015,5.10e-10,64;UBERON:0000383,5.10e-10,64;UBERON:0007500,1.21e-09,59;UBERON:0001981,1.21e-09,59;UBERON:0004537,1.21e-09,59;UBERON:0006965,1.21e-09,59;UBERON:0004872,3.72e-09,83;UBERON:0001637,5.05e-09,42;UBERON:0003509,5.05e-09,42;UBERON:0004572,5.05e-09,42;UBERON:0000055,8.59e-09,68;UBERON:0009569,4.32e-07,112 | |||
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| ||
|short_description=p2@C1orf86 | |||
}} | }} |
Latest revision as of 23:42, 24 September 2015
Short description: | p2@C1orf86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf86_5end |
Coexpression cluster: | C3937_Mesenchymal_Renal_Alveolar_Pericytes_Placental_Fibroblast_Osteoblast |
Association with transcript: | 0bp_to_ENST00000378543, ENST00000400918, ENST00000400919, ENST00000420515, ENST00000428120, ENST00000440825_5end |
EntrezGene: | C1orf86 |
HGNC: | 26428 |
UniProt: | A8MQT6Q7Z4P6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.15e-25 | 250 |
mesodermal cell | 1.00e-15 | 121 |
smooth muscle cell | 1.24e-12 | 43 |
smooth muscle myoblast | 1.24e-12 | 43 |
muscle precursor cell | 2.60e-12 | 58 |
myoblast | 2.60e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.60e-12 | 58 |
muscle cell | 1.15e-11 | 55 |
electrically responsive cell | 1.71e-11 | 61 |
electrically active cell | 1.71e-11 | 61 |
vascular associated smooth muscle cell | 5.26e-10 | 32 |
epithelial cell | 2.25e-08 | 253 |
fibroblast | 3.80e-08 | 76 |
ectodermal cell | 1.45e-07 | 72 |