FFCP PHASE1:Hg19::chr16:19421906..19421915,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79838 | |EntrezGene=79838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22999 | |HGNC=22999 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYU8 | |UniProt=F5GYU8 | ||
|association_with_transcript=45bp_to_ENST00000541464,uc010vaq.1_5end | |association_with_transcript=45bp_to_ENST00000541464,uc010vaq.1_5end | ||
|cluster_id=chr16:19421906..19421915,+ | |||
|coexpression_cluster_id=C3539 | |coexpression_cluster_id=C3539 | ||
|description=CAGE_peak_15_at_TMC5_5end | |description=CAGE_peak_15_at_TMC5_5end | ||
|id=chr16:19421906..19421915,+ | |id=chr16:19421906..19421915,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.74e-15;29 | |||
|ontology_enrichment_disease=DOID:305!2.38e-16!106;DOID:0050687!4.84e-14!143;DOID:162!8.23e-09!235;DOID:14566!1.77e-08!239;DOID:3493!3.14e-08!2 | |ontology_enrichment_disease=DOID:305!2.38e-16!106;DOID:0050687!4.84e-14!143;DOID:162!8.23e-09!235;DOID:14566!1.77e-08!239;DOID:3493!3.14e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.44e-27!9;UBERON:0000065!5.00e-17!53;UBERON:0004119!2.74e-15!169;UBERON:0000925!2.74e-15!169;UBERON:0006595!2.74e-15!169;UBERON:0001557!3.73e-15!19;UBERON:0004921!5.58e-15!129;UBERON:0004185!5.58e-15!129;UBERON:0008947!7.43e-15!38;UBERON:0003258!7.43e-15!38;UBERON:0001004!1.02e-14!72;UBERON:0000077!1.15e-13!130;UBERON:0001007!1.68e-12!155;UBERON:0001555!1.68e-12!155;UBERON:0007026!1.68e-12!155;UBERON:0001041!2.16e-12!98;UBERON:0000072!4.35e-08!46 | |ontology_enrichment_uberon=UBERON:0001737!2.44e-27!9;UBERON:0000065!5.00e-17!53;UBERON:0004119!2.74e-15!169;UBERON:0000925!2.74e-15!169;UBERON:0006595!2.74e-15!169;UBERON:0001557!3.73e-15!19;UBERON:0004921!5.58e-15!129;UBERON:0004185!5.58e-15!129;UBERON:0008947!7.43e-15!38;UBERON:0003258!7.43e-15!38;UBERON:0001004!1.02e-14!72;UBERON:0000077!1.15e-13!130;UBERON:0001007!1.68e-12!155;UBERON:0001555!1.68e-12!155;UBERON:0007026!1.68e-12!155;UBERON:0001041!2.16e-12!98;UBERON:0000072!4.35e-08!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.74e-50;2!UBERON:0003126;1.65e-15;7!UBERON:0001005;1.65e-15;7!UBERON:0005178;1.59e-09;34!UBERON:0002224;1.59e-09;34!UBERON:0007196;5.55e-08;15!UBERON:0001558;5.55e-08;15!UBERON:0000065;3.43e-07;44!UBERON:0000915;7.96e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.74e-50,2;UBERON:0003126,1.65e-15,7;UBERON:0001005,1.65e-15,7;UBERON:0005178,6.62e-13,34;UBERON:0002224,6.62e-13,34;UBERON:0005181,1.42e-12,35;UBERON:0008947,1.10e-11,38;UBERON:0003258,1.10e-11,38;UBERON:0000915,6.99e-09,52;UBERON:0000065,1.34e-08,54;UBERON:0007196,5.55e-08,15;UBERON:0001558,5.55e-08,15 | |||
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| ||
|short_description=p15@TMC5 | |short_description=p15@TMC5 | ||
}} | }} |
Latest revision as of 23:43, 24 September 2015
Short description: | p15@TMC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TMC5_5end |
Coexpression cluster: | C3539_lung_adenocarcinoma_trachea_gastric_somatostatinoma_Hep2_signet |
Association with transcript: | 45bp_to_ENST00000541464, uc010vaq.1_5end |
EntrezGene: | TMC5 |
HGNC: | 22999 |
UniProt: | F5GYU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.74e-50 | 2 |
trachea | 1.65e-15 | 7 |
respiratory airway | 1.65e-15 | 7 |
thoracic cavity element | 6.62e-13 | 34 |
thoracic cavity | 6.62e-13 | 34 |
thoracic segment organ | 1.42e-12 | 35 |
respiratory primordium | 1.10e-11 | 38 |
endoderm of foregut | 1.10e-11 | 38 |
thoracic segment of trunk | 6.99e-09 | 52 |
respiratory tract | 1.34e-08 | 54 |
tracheobronchial tree | 5.55e-08 | 15 |
lower respiratory tract | 5.55e-08 | 15 |