FFCP PHASE1:Hg19::chr11:88070920..88070953,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1075 | |EntrezGene=1075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2528 | |HGNC=2528 | ||
|TSSclassifier=strong | |||
|UniProt=Q2HIY8,P53634 | |UniProt=Q2HIY8,P53634 | ||
|association_with_transcript=0bp_to_ENST00000524463,NM_001114173,NM_001814,NM_148170,uc001pck.3,uc001pcl.3,uc001pcm.3,uc001pcn.3_5end | |association_with_transcript=0bp_to_ENST00000524463,NM_001114173,NM_001814,NM_148170,uc001pck.3,uc001pcl.3,uc001pcm.3,uc001pcn.3_5end | ||
|cluster_id=chr11:88070920..88070953,- | |||
|description=CAGE_peak_2_at_CTSC_5end | |description=CAGE_peak_2_at_CTSC_5end | ||
|id=chr11:88070920..88070953,- | |id=chr11:88070920..88070953,- | ||
|ontology_enrichment_celltype=CL:0000548!6.72e-19!679;CL:0000004!6.72e-19!679;CL:0000255!6.72e-19!679;CL:0000012!2.69e-18!682;CL:0000144!2.15e-13!625;CL:0002371!2.43e-11!591;CL:0000055!3.42e-10!180;CL:0002321!4.41e-10!248;CL:0000220!1.94e-09!246;CL:0000393!6.24e-09!60;CL:0000211!6.24e-09!60;CL:0000183!1.47e-08!59;CL:0000187!2.95e-08!54;CL:0000003!4.94e-08!722;CL:0000680!1.02e-07!57;CL:0000056!1.02e-07!57;CL:0000355!1.02e-07!57 | |ontology_enrichment_celltype=CL:0000548!6.72e-19!679;CL:0000004!6.72e-19!679;CL:0000255!6.72e-19!679;CL:0000012!2.69e-18!682;CL:0000144!2.15e-13!625;CL:0002371!2.43e-11!591;CL:0000055!3.42e-10!180;CL:0002321!4.41e-10!248;CL:0000220!1.94e-09!246;CL:0000393!6.24e-09!60;CL:0000211!6.24e-09!60;CL:0000183!1.47e-08!59;CL:0000187!2.95e-08!54;CL:0000003!4.94e-08!722;CL:0000680!1.02e-07!57;CL:0000056!1.02e-07!57;CL:0000355!1.02e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.73e-10,250;CL:0000393,3.51e-09,61;CL:0000211,3.51e-09,61;CL:0000187,1.66e-08,55;CL:0000680,5.84e-08,58;CL:0000056,5.84e-08,58;CL:0000355,5.84e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.16e-11!143;UBERON:0000926!2.23e-11!448;UBERON:0004120!2.23e-11!448;UBERON:0006603!2.23e-11!448;UBERON:0003104!4.11e-11!238;UBERON:0009142!4.11e-11!238;UBERON:0000914!1.88e-09!83;UBERON:0002329!1.88e-09!83;UBERON:0003077!1.88e-09!83;UBERON:0003059!1.88e-09!83;UBERON:0007282!1.88e-09!83;UBERON:0009618!1.88e-09!83;UBERON:0007285!1.88e-09!83;UBERON:0002100!2.58e-09!216;UBERON:0000922!4.24e-09!612;UBERON:0004290!2.13e-08!70;UBERON:0000486!9.21e-08!82;UBERON:0000481!1.04e-07!347;UBERON:0002050!1.69e-07!605;UBERON:0005423!1.69e-07!605;UBERON:0000490!2.34e-07!138;UBERON:0000923!2.91e-07!604;UBERON:0005291!2.91e-07!604;UBERON:0006598!2.91e-07!604;UBERON:0002532!2.91e-07!604;UBERON:0001134!5.70e-07!61;UBERON:0002036!5.70e-07!61;UBERON:0003082!5.70e-07!61;UBERON:0001048!8.39e-07!168 | |ontology_enrichment_uberon=UBERON:0005256!1.16e-11!143;UBERON:0000926!2.23e-11!448;UBERON:0004120!2.23e-11!448;UBERON:0006603!2.23e-11!448;UBERON:0003104!4.11e-11!238;UBERON:0009142!4.11e-11!238;UBERON:0000914!1.88e-09!83;UBERON:0002329!1.88e-09!83;UBERON:0003077!1.88e-09!83;UBERON:0003059!1.88e-09!83;UBERON:0007282!1.88e-09!83;UBERON:0009618!1.88e-09!83;UBERON:0007285!1.88e-09!83;UBERON:0002100!2.58e-09!216;UBERON:0000922!4.24e-09!612;UBERON:0004290!2.13e-08!70;UBERON:0000486!9.21e-08!82;UBERON:0000481!1.04e-07!347;UBERON:0002050!1.69e-07!605;UBERON:0005423!1.69e-07!605;UBERON:0000490!2.34e-07!138;UBERON:0000923!2.91e-07!604;UBERON:0005291!2.91e-07!604;UBERON:0006598!2.91e-07!604;UBERON:0002532!2.91e-07!604;UBERON:0001134!5.70e-07!61;UBERON:0002036!5.70e-07!61;UBERON:0003082!5.70e-07!61;UBERON:0001048!8.39e-07!168 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.86e-11,160;UBERON:0009142,1.86e-11,160;UBERON:0007503,5.16e-10,78;UBERON:0005256,3.88e-09,122;UBERON:0000490,7.83e-09,148;UBERON:0002329,1.23e-08,71;UBERON:0003059,1.23e-08,71;UBERON:0007282,1.23e-08,71;UBERON:0004290,1.23e-08,71;UBERON:0009618,1.23e-08,71;UBERON:0002100,1.49e-08,199;UBERON:0007524,1.62e-08,73;UBERON:0003077,3.98e-08,72;UBERON:0007285,3.98e-08,72;UBERON:0000922,4.24e-08,592;UBERON:0000486,5.51e-08,83;UBERON:0001134,3.36e-07,62;UBERON:0002036,3.36e-07,62;UBERON:0003082,3.36e-07,62 | |||
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| ||
|short_description=p2@CTSC | |short_description=p2@CTSC | ||
}} | }} |
Latest revision as of 23:44, 24 September 2015
Short description: | p2@CTSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTSC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524463, NM_001114173, NM_001814, NM_148170, uc001pck.3, uc001pcl.3, uc001pcm.3, uc001pcn.3_5end |
EntrezGene: | CTSC |
HGNC: | 2528 |
UniProt: | Q2HIY8P53634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.73e-10 | 250 |
electrically responsive cell | 3.51e-09 | 61 |
electrically active cell | 3.51e-09 | 61 |
muscle cell | 1.66e-08 | 55 |
muscle precursor cell | 5.84e-08 | 58 |
myoblast | 5.84e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.84e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.86e-11 | 160 |
entire embryonic mesenchyme | 1.86e-11 | 160 |
epithelial vesicle | 5.16e-10 | 78 |
trunk mesenchyme | 3.88e-09 | 122 |
unilaminar epithelium | 7.83e-09 | 148 |
somite | 1.23e-08 | 71 |
presomitic mesoderm | 1.23e-08 | 71 |
presumptive segmental plate | 1.23e-08 | 71 |
dermomyotome | 1.23e-08 | 71 |
trunk paraxial mesoderm | 1.23e-08 | 71 |
trunk | 1.49e-08 | 199 |
dense mesenchyme tissue | 1.62e-08 | 73 |
paraxial mesoderm | 3.98e-08 | 72 |
presumptive paraxial mesoderm | 3.98e-08 | 72 |
embryo | 4.24e-08 | 592 |
multilaminar epithelium | 5.51e-08 | 83 |
skeletal muscle tissue | 3.36e-07 | 62 |
striated muscle tissue | 3.36e-07 | 62 |
myotome | 3.36e-07 | 62 |