FFCP PHASE1:Hg19::chr11:1092822..1092856,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4583 | |EntrezGene=4583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7512 | |HGNC=7512 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-461bp_to_ENST00000333592_5end | |association_with_transcript=-461bp_to_ENST00000333592_5end | ||
|cluster_id=chr11:1092822..1092856,+ | |||
|coexpression_cluster_id=C201 | |coexpression_cluster_id=C201 | ||
|description=CAGE_peak_7_at_MUC2_5end | |description=CAGE_peak_7_at_MUC2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.21e-15;1!UBERON:0006242;3.17e-15;1 | |ontology_enrichment_development_v019=UBERON:0001045;2.21e-15;1!UBERON:0006242;3.17e-15;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.73e-16!27;UBERON:0005409!6.99e-12!35;UBERON:0000059!2.55e-11!11;UBERON:0001155!3.42e-09!9;UBERON:0001007!1.07e-07!155;UBERON:0001555!1.07e-07!155;UBERON:0007026!1.07e-07!155;UBERON:0002110!2.80e-07!3;UBERON:0006242!2.80e-07!3;UBERON:0005383!6.47e-07!3;UBERON:0005382!6.47e-07!3;UBERON:0004921!7.44e-07!129;UBERON:0004185!7.44e-07!129 | |ontology_enrichment_uberon=UBERON:0000160!7.73e-16!27;UBERON:0005409!6.99e-12!35;UBERON:0000059!2.55e-11!11;UBERON:0001155!3.42e-09!9;UBERON:0001007!1.07e-07!155;UBERON:0001555!1.07e-07!155;UBERON:0007026!1.07e-07!155;UBERON:0002110!2.80e-07!3;UBERON:0006242!2.80e-07!3;UBERON:0005383!6.47e-07!3;UBERON:0005382!6.47e-07!3;UBERON:0004921!7.44e-07!129;UBERON:0004185!7.44e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.55e-50;17!UBERON:0005409;4.39e-39;22!UBERON:0000059;2.04e-32;11!UBERON:0002108;1.40e-26;4!UBERON:0001155;9.85e-26;9!UBERON:0004921;2.11e-24;33!UBERON:0001154;2.21e-15;1!UBERON:0001153;2.21e-15;1!UBERON:0009854;2.21e-15;1!UBERON:0004907;2.82e-12;5!UBERON:0001555;5.10e-10;54!UBERON:0001007;4.33e-09;81!UBERON:0003127;2.87e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000160;4.55e-50;17!UBERON:0005409;4.39e-39;22!UBERON:0000059;2.04e-32;11!UBERON:0002108;1.40e-26;4!UBERON:0001155;9.85e-26;9!UBERON:0004921;2.11e-24;33!UBERON:0001154;2.21e-15;1!UBERON:0001153;2.21e-15;1!UBERON:0009854;2.21e-15;1!UBERON:0004907;2.82e-12;5!UBERON:0001555;5.10e-10;54!UBERON:0001007;4.33e-09;81!UBERON:0003127;2.87e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.41e-50,17;UBERON:0005409,1.58e-34,25;UBERON:0000059,1.97e-32,11;UBERON:0002108,1.40e-26,4;UBERON:0001155,9.24e-26,9;UBERON:0001154,2.06e-15,1;UBERON:0001153,2.06e-15,1;UBERON:0001045,2.06e-15,1;UBERON:0004907,2.82e-12,5;UBERON:0004921,6.04e-11,118;UBERON:0001007,1.24e-10,145;UBERON:0001555,1.24e-10,145;UBERON:0007026,1.24e-10,145;UBERON:0004119,1.59e-09,160;UBERON:0000925,1.59e-09,160;UBERON:0006595,1.59e-09,160;UBERON:0003127,2.87e-08,2;UBERON:0011216,9.47e-08,223 | |||
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|short_description=p7@MUC2 | |short_description=p7@MUC2 | ||
}} | }} |
Latest revision as of 00:35, 25 September 2015
Short description: | p7@MUC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MUC2_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | -461bp_to_ENST00000333592_5end |
EntrezGene: | MUC2 |
HGNC: | 7512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.41e-50 | 17 |
gastrointestinal system | 1.58e-34 | 25 |
large intestine | 1.97e-32 | 11 |
small intestine | 1.40e-26 | 4 |
colon | 9.24e-26 | 9 |
vermiform appendix | 2.06e-15 | 1 |
caecum | 2.06e-15 | 1 |
midgut | 2.06e-15 | 1 |
lower digestive tract | 2.82e-12 | 5 |
subdivision of digestive tract | 6.04e-11 | 118 |
digestive system | 1.24e-10 | 145 |
digestive tract | 1.24e-10 | 145 |
primitive gut | 1.24e-10 | 145 |
endoderm-derived structure | 1.59e-09 | 160 |
endoderm | 1.59e-09 | 160 |
presumptive endoderm | 1.59e-09 | 160 |
open tracheal system trachea | 2.87e-08 | 2 |
organ system subdivision | 9.47e-08 | 223 |