FFCP PHASE1:Hg19::chr2:224839922..224839994,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |EntrezGene=5270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8951 | |HGNC=8951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=387bp_to_AJ293400_5end | |association_with_transcript=387bp_to_AJ293400_5end | ||
|cluster_id=chr2:224839922..224839994,- | |||
|coexpression_cluster_id=C2263 | |||
|description=CAGE_peak_10_at_SERPINE2_5end | |description=CAGE_peak_10_at_SERPINE2_5end | ||
|id=chr2:224839922..224839994,- | |id=chr2:224839922..224839994,- | ||
|ontology_enrichment_celltype=CL:0000055!1.00e-14!180;CL:0000057!5.52e-10!75;CL:0002620!6.23e-10!23 | |ontology_enrichment_celltype=CL:0000055!1.00e-14!180;CL:0000057!5.52e-10!75;CL:0002620!6.23e-10!23 | ||
|ontology_enrichment_celltype_v019=CL:0000056;7.81e-15;4!CL:0002579;5.75e-13;3!CL:0000515;1.23e-11;3!CL:0002620;1.74e-09;23!CL:1000306;2.86e-09;4!CL:0002547;2.86e-09;4!CL:0000680;1.62e-08;7!CL:0002334;7.28e-08;12!CL:0000153;4.76e-07;9!CL:0000447;4.76e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.76e-15,4;CL:0000057,1.12e-13,76;CL:0002579,5.23e-13,3;CL:0002620,2.01e-09,23;CL:1000306,2.56e-09,4;CL:0002547,2.56e-09,4;CL:0002334,5.29e-08,12;CL:0000153,3.84e-07,9;CL:0000447,3.84e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;7.81e-15;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.10e-12;5!DOID:450;2.10e-12;5!DOID:66;2.10e-12;5!DOID:423;2.10e-12;5!DOID:0080000;2.10e-12;5!DOID:11722;2.10e-12;5!DOID:1909;1.11e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.24e-12,5;DOID:450,2.24e-12,5;DOID:66,2.24e-12,5;DOID:423,2.24e-12,5;DOID:0080000,2.24e-12,5;DOID:11722,2.24e-12,5;DOID:1909,1.13e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.73e-08!40;UBERON:0002199!2.11e-07!45;UBERON:0002416!2.11e-07!45 | |ontology_enrichment_uberon=UBERON:0002097!1.73e-08!40;UBERON:0002199!2.11e-07!45;UBERON:0002416!2.11e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.84e-20;9!UBERON:0000042;2.84e-20;9!UBERON:0003688;2.48e-16;6!UBERON:0002358;2.48e-16;6!UBERON:0003684;2.48e-16;6!UBERON:0001178;2.48e-16;6!UBERON:0004797;2.86e-09;4!UBERON:0000415;2.86e-09;4!UBERON:0007240;2.86e-09;4!UBERON:0005742;2.86e-09;4!UBERON:0005734;2.86e-09;4!UBERON:0004664;2.86e-09;4!UBERON:0004663;2.86e-09;4!UBERON:0002097;6.25e-09;41!UBERON:0002199;4.84e-07;46!UBERON:0002416;4.84e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.95e-16,6;UBERON:0002358,3.95e-16,6;UBERON:0003684,3.95e-16,6;UBERON:0001178,3.95e-16,6;UBERON:0004457,6.62e-15,12;UBERON:0000042,6.62e-15,12;UBERON:0002097,8.41e-11,41;UBERON:0004923,1.24e-09,66;UBERON:0002199,2.37e-09,46;UBERON:0002416,2.37e-09,46;UBERON:0000415,2.56e-09,4;UBERON:0007240,2.56e-09,4;UBERON:0005742,2.56e-09,4;UBERON:0005734,2.56e-09,4;UBERON:0004664,2.56e-09,4;UBERON:0004663,2.56e-09,4;UBERON:0004797,6.28e-09,7 | |||
|phase1_expression=0.363356758541113,0.214100523890983,2.11431606143957,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2046137239216,0.50133791063589,0.869079113764942,0.795285947051099,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,2.65924074495618,1.19168262731897,5.44989579422746,0.354668382198357,0,3.20246987189115,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.340296549480063,1.07633781413317,2.13557388818567,2.7551147150743,2.40072876867522,0.412210116953756,1.03056216018252,3.53622027030021,0.843881661206331,0.389748020644795,0.504867548488229,5.15479432396876,0.161646056818812,4.26011511019937,0.705264687593482,0.67824236924195,1.73934767846967,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,2.63400684980701,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0,0.300343057843917,0,0,0,0,2.19761916788222,0,0,1.86156681609409,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,2.31650090668127,1.02738161275192,1.25342674267927,0,0,0,0,0.254094624222463,0,0.773288812777695,0,1.27587750330633,0,0,0,0.12269149171914,0.500170521059677,0,0,0.892144943985809,0.473107245101804,1.05427273493442,0.601892199455438,0,0,0,0,2.17209036170207,0,0,0,0,0,0,0,0,1.98486246255021,0.306923946576125,0,22.296211970492,7.67560873600055,2.41280881715411,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0.184161977871793,0.574072240823034,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,0.464845549297286,4.09256050879832,1.3940745403212,0.616067160352178,0.532306030317022,6.08953094452551,0.74129687641568,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0.409499734223957,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,2.74439925886963,1.31717957183961,0,0,0.288666338176536,0,0,0.188287601553558,1.72202149068492,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0,0,0.703347082052564,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,4.46601623624687,0.915975934018623,8.52855641629816,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0.485560759068186,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.554698692052555,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.313808538937,0,0,0,0,0,0,0,0,0.229160424011684,1.43574604915363,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0.408610218334727,0.482259445395058,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0.864221491201268,0.979762080328227,0,0.082092520749339,0.170388021785422,0,0,0,0.775697738169303,0.26446520348538,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0.443716206147409,0.124192805882767,0,0,1.21319294033318,5.42384133735438,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0.466311601748341,0,0,0,0,2.07353103920428,0,0,0.300515217994437,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0.343395705182793,1.01024846629776,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0,0.169732529954025,0,0.123935764259002,0,1.27201740261367,0,0,0.352675943690684,0.6124909547064,0,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.992422356778588,0,0.127762427639595,0,0,0,0,0.79832133146375,0,1.20041606606193,0,0.0657727735628491,0,0,0,0.314231179832004,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,2.01164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| ||
|short_description=p10@SERPINE2 | |short_description=p10@SERPINE2 | ||
}} | }} |
Latest revision as of 00:41, 25 September 2015
Short description: | p10@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SERPINE2_5end |
Coexpression cluster: | C2263_Preadipocyte_Chondrocyte_Fibroblast_basal_Adipocyte_Smooth_Ewing |
Association with transcript: | 387bp_to_AJ293400_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.76e-15 | 4 |
fibroblast | 1.12e-13 | 76 |
omentum preadipocyte | 5.23e-13 | 3 |
skin fibroblast | 2.01e-09 | 23 |
fibroblast of tunica adventitia of artery | 2.56e-09 | 4 |
fibroblast of the aortic adventitia | 2.56e-09 | 4 |
preadipocyte | 5.29e-08 | 12 |
GAG secreting cell | 3.84e-07 | 9 |
carbohydrate secreting cell | 3.84e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.95e-16 | 6 |
peritoneum | 3.95e-16 | 6 |
abdominal cavity | 3.95e-16 | 6 |
visceral peritoneum | 3.95e-16 | 6 |
cavity lining | 6.62e-15 | 12 |
serous membrane | 6.62e-15 | 12 |
skin of body | 8.41e-11 | 41 |
organ component layer | 1.24e-09 | 66 |
integument | 2.37e-09 | 46 |
integumental system | 2.37e-09 | 46 |
artery wall | 2.56e-09 | 4 |
tunica adventitia of artery | 2.56e-09 | 4 |
adventitia | 2.56e-09 | 4 |
tunica adventitia of blood vessel | 2.56e-09 | 4 |
aorta tunica adventitia | 2.56e-09 | 4 |
aorta wall | 2.56e-09 | 4 |
blood vessel layer | 6.28e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.24e-12 | 5 |
myotonic disease | 2.24e-12 | 5 |
muscle tissue disease | 2.24e-12 | 5 |
myopathy | 2.24e-12 | 5 |
muscular disease | 2.24e-12 | 5 |
myotonic dystrophy | 2.24e-12 | 5 |
melanoma | 1.13e-08 | 2 |