FFCP PHASE1:Hg19::chr19:1041212..1041234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10347 | |EntrezGene=10347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37 | |HGNC=37 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000527496_5end | |association_with_transcript=8bp_to_ENST00000527496_5end | ||
|cluster_id=chr19:1041212..1041234,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_ABCA7_5end | |description=CAGE_peak_2_at_ABCA7_5end | ||
|id=chr19:1041212..1041234,+ | |id=chr19:1041212..1041234,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;1.76e-09;4!CL:0002561;4.85e-09;2!CL:0002575;4.85e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,2.72e-09,2;CL:0000669,2.73e-09,4;CL:0002575,4.42e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;1.33e-08;2!DOID:1907;1.33e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,1.50e-08,2;DOID:1907,1.50e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.30e-10;4!UBERON:0010133;5.30e-10;4!UBERON:0001905;9.26e-10;2!UBERON:0002757;9.26e-10;2!UBERON:0010134;9.26e-10;2!UBERON:0005408;9.26e-10;2!UBERON:0001899;9.26e-10;2!UBERON:0005933;4.85e-09;2!UBERON:0005942;4.85e-09;2!UBERON:0005932;4.85e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,7.09e-10,4;UBERON:0010133,7.09e-10,4;UBERON:0001905,9.33e-10,2;UBERON:0002757,9.33e-10,2;UBERON:0010134,9.33e-10,2;UBERON:0005408,9.33e-10,2;UBERON:0001899,9.33e-10,2;UBERON:0005933,2.72e-09,2;UBERON:0005942,2.72e-09,2;UBERON:0005932,2.72e-09,2 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0.491467873003018,0.697801167972428,0,0,0.866364470720326,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.647787332037959,0,0.290796477559129,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0.425208599930087,0,0,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0.289803085735052,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0,0,0,0,0.324547393654683,0,0,0.476981248610684,0,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.993943903390637,0,0,0,0,0.560677600142307,0,0,0,0,0,0.605429710579726,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0.516628905878827,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0.612975591598039,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0.600182192168805,0,0.772921620136887,1.30281799432113,0.675105328965065,0,0.504867548488229,0.184099797284599,0.646584227275248,0.355009592516614,0.10075209822764,0.169560592310488,1.93260853163297,0.272746120590835,1.72082757233402,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,1.85747171212792,4.33127689001751,0.118306800039844,0.337169380156203,0,0.330881918197182,0.435758888184812,0.71181185733329,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0.441463099414651,0,0,0.548751427043128,0,0.201057944823262,0,0,0,1.44331342025273,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0,0,0,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0,0,0,0.129271715757778,14.3062578340753,0,0.531876233169741,1.04007436911366,0,0,0,0.714889968290738,2.17048642156577,0.823240336780769,0.65147236858747,0,0,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,1.2328579353023,0.716243852959582,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0,0,4.30762546418029,1.37257369524342,0,0,0.213455115606889,0,0,0,0,0.460385919864187,0,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0,0,0.524497659837696,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0.657779629937804,1.0457418040996,0.512900250232778,0.656029291399411,0,0,0.0915694648183434,0,0,1.30012049207304,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0.712256285173899,0,0,0,0.10115778085555,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0.855877976067841,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,1.32687795048244,0,0,0,0,0,0,0,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.70894156152249,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,1.23087398947712,0.540911356951966,0,1.4098700508785,0.561421621224659,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0.179021174675609,0.511572370226872,0.0986434056369336,0,4.44547960578548,0,0.185536196323703,0,0,0.0874599999961957,0.724999575434793,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,1.3269511191747,0.591095237907095,0.438770794307945,0.435753854075961,0,0.0769502585037971,0,0.23056390438806,0,0.108647371922008,0.638002319463839,0.0915975934018623,1.5991043280559,0,0.156980256395025,0.166211681900156,0.902382642468723,1.9606253431774,0.335643173951685,3.41556718903533,0.317873157960757,0,0.163232808159148,0.141353071433941,0,1.99052386215701,0.0884575645033392,0,0,0,0,0,0,0,0,0,1.69946265673865,0,0,0.30607276163049,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.19351266257817,0.219267951258557,0.328461828212837,0.969890164884194,0.176512253383001,12.8809022244904,0,0.19871461170299,0.189932387867636,0.195551382734803,1.12222348352147,0,0.19980960958213,0,0.229073192331831,0,0.576219191952599,0.248505071130865,0.235694034616795,0,0.313808538937,0.203996435272644,0.288950589901519,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,1.080899650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| ||
|short_description=p2@ABCA7 | |short_description=p2@ABCA7 | ||
}} | }} |
Latest revision as of 00:50, 25 September 2015
Short description: | p2@ABCA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCA7_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 8bp_to_ENST00000527496_5end |
EntrezGene: | ABCA7 |
HGNC: | 37 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 2.72e-09 | 2 |
pericyte cell | 2.73e-09 | 4 |
central nervous system pericyte | 4.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 7.09e-10 | 4 |
neuroendocrine gland | 7.09e-10 | 4 |
pineal body | 9.33e-10 | 2 |
regional part of epithalamus | 9.33e-10 | 2 |
secretory circumventricular organ | 9.33e-10 | 2 |
circumventricular organ | 9.33e-10 | 2 |
epithalamus | 9.33e-10 | 2 |
hair root sheath | 2.72e-09 | 2 |
hair outer root sheath | 2.72e-09 | 2 |
bulb of hair follicle | 2.72e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.50e-08 | 2 |
malignant fibroxanthoma | 1.50e-08 | 2 |