FFCP PHASE1:Hg19::chr17:43325311..43325335,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100133991 | |EntrezGene=100133991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_NR_024434,uc010dah.2_5end | |association_with_transcript=8bp_to_NR_024434,uc010dah.2_5end | ||
|cluster_id=chr17:43325311..43325335,+ | |||
|description=CAGE_peak_1_at_LOC100133991_5end | |description=CAGE_peak_1_at_LOC100133991_5end | ||
|id=chr17:43325311..43325335,+ | |id=chr17:43325311..43325335,+ | ||
|ontology_enrichment_celltype=CL:0000084;1.04e-13;25!CL:0000791;1.94e-11;18!CL:0000789;1.94e-11;18!CL:0002419;1.94e-11;18!CL:0000542;3.03e-09;53!CL:0002368;7.24e-09;13!CL:0002076;9.57e-09;42!CL:0000082;3.26e-07;19 | |ontology_enrichment_celltype=CL:0000066!6.71e-19!254;CL:0000542!5.77e-14!53;CL:0000051!5.77e-14!53;CL:0000838!6.71e-14!52;CL:0002076!3.58e-10!43;CL:0000084!1.47e-09!25;CL:0000827!1.47e-09!25;CL:0000791!2.62e-08!18;CL:0000789!2.62e-08!18;CL:0002420!2.62e-08!18;CL:0002419!2.62e-08!18;CL:0000790!2.62e-08!18;CL:0000223!1.38e-07!59;CL:0000082!9.87e-07!19 | ||
| | |ontology_enrichment_celltype_v019=CL:0000084;1.04e-13;25!CL:0000791;1.94e-11;18!CL:0000789;1.94e-11;18!CL:0002419;1.94e-11;18!CL:0000542;3.03e-09;53!CL:0002368;7.24e-09;13!CL:0002076;9.57e-09;42!CL:0000082;3.26e-07;19 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000838,1.07e-15,52;CL:0000542,3.81e-15,53;CL:0000051,3.81e-15,53;CL:0000084,6.16e-14,25;CL:0000827,6.16e-14,25;CL:0000066,2.85e-13,253;CL:0000791,9.55e-12,18;CL:0000789,9.55e-12,18;CL:0002420,9.55e-12,18;CL:0002419,9.55e-12,18;CL:0000790,9.55e-12,18;CL:0002076,4.42e-11,42;CL:0002368,4.68e-09,13;CL:0000082,2.41e-07,19;CL:0000625,7.75e-07,11 | ||
|ontology_enrichment_uberon=UBERON:0005911;5.52e-09;36!UBERON:0004807;2.12e-08;22!UBERON:0004802;3.26e-07;19!UBERON:0000115;3.26e-07;19 | |ontology_enrichment_development_v019=CL:0000790;1.94e-11;18!CL:0000051;3.03e-09;53 | ||
|ontology_enrichment_disease=DOID:305!2.39e-13!106;DOID:162!6.44e-11!235;DOID:14566!7.43e-10!239;DOID:0050687!2.43e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.27e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.32e-15!169;UBERON:0000925!8.32e-15!169;UBERON:0006595!8.32e-15!169;UBERON:0004921!1.51e-11!129;UBERON:0004185!1.51e-11!129;UBERON:0001007!8.68e-11!155;UBERON:0001555!8.68e-11!155;UBERON:0007026!8.68e-11!155;UBERON:0000077!1.30e-10!130;UBERON:0005911!1.43e-10!82;UBERON:0000065!1.07e-09!53;UBERON:0001004!2.65e-09!72;UBERON:0004807!1.45e-08!28;UBERON:0001041!1.65e-08!98;UBERON:0000072!1.10e-07!46;UBERON:0005153!1.69e-07!37;UBERON:0008947!7.70e-07!38;UBERON:0003258!7.70e-07!38;UBERON:0002048!8.70e-07!22;UBERON:0000117!8.70e-07!22;UBERON:0000171!8.70e-07!22;UBERON:0000170!8.70e-07!22;UBERON:0005597!8.70e-07!22;UBERON:0000118!8.70e-07!22;UBERON:0000464!8.84e-07!104;UBERON:0004802!9.87e-07!19;UBERON:0000115!9.87e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;5.52e-09;36!UBERON:0004807;2.12e-08;22!UBERON:0004802;3.26e-07;19!UBERON:0000115;3.26e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.98e-10,160;UBERON:0000925,1.98e-10,160;UBERON:0006595,1.98e-10,160;UBERON:0004807,5.92e-10,28;UBERON:0005911,2.88e-09,82;UBERON:0000065,2.91e-08,54;UBERON:0001004,7.73e-08,74;UBERON:0004921,1.61e-07,118;UBERON:0004802,2.41e-07,19;UBERON:0000115,2.41e-07,19;UBERON:0001007,6.58e-07,145;UBERON:0001555,6.58e-07,145;UBERON:0007026,6.58e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.44027511102112,16.0494268633658,2.40285509343189,2.11013582582763,0.247532705920093,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,1.98674854944673,1.47781061009902,1.65292640758726,0.393364276848904,0.767658796194425,0.619264493264304,1.83884244895785,3.31326510656075,5.54631015250181,0.542270404062111,0.284338464974843,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0.971680998056939,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,2.66852776159066,1.28019066769952,1.20118796110804,3.4485146397269,0.661044872784862,0,1.1384259382189,1.17447437874188,1.52909291250092,0,0.560508562981536,0.526768169550154,4.91774425284583,1.57204305099666,4.5232329779892,5.18278135711102,5.54067853277104,7.101717086021,9.74133642039557,5.45911238737351,2.06224135232386,3.32300841875432,2.70803863765016,4.09892223122161,2.34106825607781,3.78207180588455,1.65810010671509,2.89803085735052,6.07974908964448,6.95606153033254,3.1360657141493,3.39928028092699,2.68254345521345,2.06176467289578,3.03623630423403,2.86708872891687,3.90650072313851,2.85135613334512,3.61380285786655,3.19966527886046,0,2.8413270245282,1.64225599384209,2.21767417547206,1.33720097891754,3.04131248153878,0,0.670700859703636,0.639312809217652,0,0.50133791063589,0,0.795285947051099,0.973269740605272,0.661743720148475,0.443458794925128,0.351339142772504,0.392937226493138,6.55731518926576,5.19098219898201,0.324547393654683,0.348259474598534,0.26591592103773,0.715471872916026,1.71598473234038,1.11437250398869,0,0,0.347140501607594,0,0,0,0,0,0,0,0.805658634218294,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0,0.605429710579726,0,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,2.51239109112286,1.63647672354501,1.72082757233402,1.34171076742555,0.795178609928912,1.2781333715647,0.518305275076852,1.51392510525377,2.55484151353081,0,0,0,0,0,1.0647612003586,0,1.44606617930089,0.661763836394364,0.435758888184812,0.71181185733329,0.674156540800822,0.588664395376038,1.15424147083917,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,3.93563003337963,0.686271241194102,2.63400684980701,2.24803506515239,1.91005047582099,3.33318402570707,0.325808305310325,0,1.44331342025273,0.463721619900307,0.821860859650752,0.433099343283221,0,0.570762456703795,4.74122638775565,4.29243081047436,0,0,0.594524649154913,0.93733833986777,2.35174979478403,3.82792762554443,1.16426079513703,0.581267877027924,0,1.47798971368783,1.40877494421162,4.56121854189699,3.17063897517315,3.66103056936502,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0.901029173531752,0.285826432630578,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.857867961948885,1.08524321078289,1.64648067356154,0,0,0.791951872933429,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,3.81089489577993,2.56139988262505,1.72502059887614,1.54011643535698,0,0,0,0.670065061337395,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.173767228936166,0.587403472388222,0,3.3082884179662,0.431428401637234,1.60091336705167,1.21251028578504,1.66435439510497,1.20956117331872,0,0,0,0,0,0,2.96836132889982,0,0,0.0821271560138091,0,0,2.53804844142407,2.20557117333613,2.02578175658972,0.229628896329213,0.364182336013434,0.262248829918848,3.60959690325929,2.77255213575893,4.70609861506113,1.46139224653261,2.74434235121477,0,0.170093705276516,0.431831832204279,0,1.62567862526312,4.01351819083883,1.27438136522519,0,0.895499018888713,0,0,0,1.64007322849853,0,0.206082023295445,0,0.082509499920588,0.574265537996172,1.95018073810956,0,0,0.154048617114644,0,0,0,0,0,0,2.80984356113663,4.61256161676255,5.99779748724545,3.74283789165535,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.38126038784765,1.02359116524534,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0.430234056612155,0.491245205065606,0,0,0.211107635297664,0,0.379473173765715,0.699869440489966,3.84888450902048,1.34060455107157,2.17781969722645,0.188287601553558,8.6101074534246,5.05414427002877,7.53831261012349,3.67557440331135,2.02979043692868,0.764637207142375,2.27858874869665,2.62054953003568,4.11362273086194,2.59389324477087,1.08006287447623,1.58625035258854,0.427296284509893,0,0.490080431962063,0.743212700502875,0.865615277858669,2.48996451719449,1.11598390910176,0,0.191505370132367,1.69338866179106,0,0,0,0.156679895773023,0,0,0,0,0.851692475380653,0,3.07240764308458,1.3420566473545,2.33588798396672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| ||
|short_description=p1@LOC100133991 | |short_description=p1@LOC100133991 | ||
}} | }} |
Latest revision as of 01:36, 25 September 2015
Short description: | p1@LOC100133991 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100133991_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_NR_024434, uc010dah.2_5end |
EntrezGene: | LOC100133991 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.07e-15 | 52 |
lymphocyte | 3.81e-15 | 53 |
common lymphoid progenitor | 3.81e-15 | 53 |
T cell | 6.16e-14 | 25 |
pro-T cell | 6.16e-14 | 25 |
epithelial cell | 2.85e-13 | 253 |
mature alpha-beta T cell | 9.55e-12 | 18 |
alpha-beta T cell | 9.55e-12 | 18 |
immature T cell | 9.55e-12 | 18 |
mature T cell | 9.55e-12 | 18 |
immature alpha-beta T cell | 9.55e-12 | 18 |
endo-epithelial cell | 4.42e-11 | 42 |
respiratory epithelial cell | 4.68e-09 | 13 |
epithelial cell of lung | 2.41e-07 | 19 |
CD8-positive, alpha-beta T cell | 7.75e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.98e-10 | 160 |
endoderm | 1.98e-10 | 160 |
presumptive endoderm | 1.98e-10 | 160 |
respiratory system epithelium | 5.92e-10 | 28 |
endo-epithelium | 2.88e-09 | 82 |
respiratory tract | 2.91e-08 | 54 |
respiratory system | 7.73e-08 | 74 |
subdivision of digestive tract | 1.61e-07 | 118 |
respiratory tract epithelium | 2.41e-07 | 19 |
lung epithelium | 2.41e-07 | 19 |
digestive system | 6.58e-07 | 145 |
digestive tract | 6.58e-07 | 145 |
primitive gut | 6.58e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.27e-08 | 106 |