FFCP PHASE1:Hg19::chr2:225875684..225875687,-: Difference between revisions
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|id=chr2:225875684..225875687,-
|short_description=p3@MIR4439
|description=CAGE_peak_3_at_MIR4439_5end
|association_with_transcript=-427bp_to_NR_039641_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100616207 | |EntrezGene=100616207 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=41622 | |HGNC=41622 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-427bp_to_NR_039641_5end | |||
|cluster_id=chr2:225875684..225875687,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_MIR4439_5end | |||
|id=chr2:225875684..225875687,- | |||
|ontology_enrichment_celltype=CL:0000557!6.90e-25!71;CL:0002274!5.87e-23!5;CL:0000457!5.87e-23!5;CL:0002191!5.87e-23!5;CL:0000097!5.87e-23!5;CL:0000831!5.87e-23!5;CL:0002028!5.87e-23!5;CL:0000839!2.39e-19!70;CL:0000766!1.30e-17!76;CL:0000763!1.22e-16!112;CL:0000049!1.22e-16!112;CL:0002031!1.51e-16!124;CL:0000738!4.89e-16!140;CL:0002009!1.64e-15!65;CL:0001014!3.61e-15!2;CL:0001016!3.61e-15!2;CL:0002057!4.08e-15!42;CL:0000860!5.40e-14!45;CL:0000453!2.36e-13!5;CL:0002032!4.94e-13!165;CL:0000837!4.94e-13!165;CL:0000163!7.64e-13!9;CL:0000990!1.24e-12!8;CL:0000037!2.39e-12!172;CL:0000566!2.39e-12!172;CL:0000988!1.85e-11!182;CL:0002194!2.60e-11!63;CL:0000576!2.60e-11!63;CL:0000040!2.60e-11!63;CL:0000559!2.60e-11!63;CL:0000840!5.27e-11!5;CL:0001029!5.27e-11!5;CL:0000451!2.31e-10!10;CL:0002087!2.16e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.51e-53;5!CL:0000163;2.87e-30;9!CL:0000151;5.50e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.87e-53,5;CL:0002028,2.87e-53,5;CL:0000163,3.09e-30,9;CL:0000839,6.35e-10,66;CL:0000557,8.58e-10,67;CL:0000766,3.42e-09,72;CL:0000151,1.85e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.46e-22!80;UBERON:0001474!5.09e-20!86;UBERON:0004765!1.39e-16!101;UBERON:0001434!1.39e-16!101;UBERON:0002390!2.18e-16!102;UBERON:0003061!2.18e-16!102;UBERON:0002193!1.22e-14!112;UBERON:0002405!3.55e-14!115;UBERON:0002204!5.38e-10!167;UBERON:0003081!6.10e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.08e-09,76;UBERON:0001474,3.31e-08,82;UBERON:0004765,1.43e-07,90;UBERON:0002405,2.32e-07,93;UBERON:0002390,4.88e-07,98;UBERON:0003061,4.88e-07,98;UBERON:0001434,6.45e-07,100 | |||
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|short_description=p3@MIR4439 | |||
}} | }} |
Latest revision as of 02:06, 25 September 2015
Short description: | p3@MIR4439 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIR4439_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -427bp_to_NR_039641_5end |
EntrezGene: | MIR4439 |
HGNC: | 41622 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.87e-53 | 5 |
basophil mast progenitor cell | 2.87e-53 | 5 |
endocrine cell | 3.09e-30 | 9 |
myeloid lineage restricted progenitor cell | 6.35e-10 | 66 |
granulocyte monocyte progenitor cell | 8.58e-10 | 67 |
myeloid leukocyte | 3.42e-09 | 72 |
secretory cell | 1.85e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.08e-09 | 76 |
bone element | 3.31e-08 | 82 |
skeletal element | 1.43e-07 | 90 |
immune system | 2.32e-07 | 93 |
hematopoietic system | 4.88e-07 | 98 |
blood island | 4.88e-07 | 98 |
skeletal system | 6.45e-07 | 100 |