FFCP PHASE1:Hg19::chr11:94226943..94226952,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4361 | |EntrezGene=4361 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7230 | |HGNC=7230 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000536550_5end | |association_with_transcript=23bp_to_ENST00000536550_5end | ||
|cluster_id=chr11:94226943..94226952,- | |||
|description=CAGE_peak_3_at_MRE11A_5end | |description=CAGE_peak_3_at_MRE11A_5end | ||
|id=chr11:94226943..94226952,- | |id=chr11:94226943..94226952,- | ||
|ontology_enrichment_celltype=CL:0002251!4.65e-07!21 | |ontology_enrichment_celltype=CL:0002251!4.65e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.31e-14;1!CL:1001319;1.31e-14;1!CL:1000600;1.31e-14;1!CL:0002253;5.94e-08;2!CL:0002535;5.94e-08;2 | |ontology_enrichment_celltype_v019=CL:0000222;1.31e-14;1!CL:1001319;1.31e-14;1!CL:1000600;1.31e-14;1!CL:0002253;5.94e-08;2!CL:0002535;5.94e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.23e-14,1;CL:1000600,1.23e-14,1;CL:0002535,5.02e-08,2;CL:0002253,8.60e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.52e-23!235;DOID:14566!1.01e-22!239;DOID:0050687!1.16e-16!143;DOID:305!5.16e-15!106;DOID:0050686!9.57e-09!137;DOID:2531!4.58e-07!51;DOID:0060083!4.58e-07!51 | |ontology_enrichment_disease=DOID:162!3.52e-23!235;DOID:14566!1.01e-22!239;DOID:0050687!1.16e-16!143;DOID:305!5.16e-15!106;DOID:0050686!9.57e-09!137;DOID:2531!4.58e-07!51;DOID:0060083!4.58e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.52e-12;10!DOID:4362;1.42e-11;5!DOID:1749;4.01e-09;14 | |ontology_enrichment_disease_v019=DOID:0060058;1.52e-12;10!DOID:4362;1.42e-11;5!DOID:1749;4.01e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.27e-12,10;DOID:4362,1.50e-11,5;DOID:1749,3.96e-09,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.31e-14;1!UBERON:0001256;1.31e-14;1!UBERON:0001259;1.31e-14;1!UBERON:0000002;8.46e-10;6!UBERON:0001560;8.46e-10;6!UBERON:0000485;1.20e-08;7!UBERON:0001255;5.94e-08;2!UBERON:0006955;5.94e-08;2!UBERON:0004801;5.94e-08;2!UBERON:0001556;5.94e-08;2!UBERON:0003350;1.44e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0004645;1.31e-14;1!UBERON:0001256;1.31e-14;1!UBERON:0001259;1.31e-14;1!UBERON:0000002;8.46e-10;6!UBERON:0001560;8.46e-10;6!UBERON:0000485;1.20e-08;7!UBERON:0001255;5.94e-08;2!UBERON:0006955;5.94e-08;2!UBERON:0004801;5.94e-08;2!UBERON:0001556;5.94e-08;2!UBERON:0003350;1.44e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.23e-14,1;UBERON:0001256,1.23e-14,1;UBERON:0001259,1.23e-14,1;UBERON:0000002,8.86e-10,6;UBERON:0001560,8.86e-10,6;UBERON:0006955,5.02e-08,2;UBERON:0004801,5.02e-08,2;UBERON:0001255,5.74e-08,2;UBERON:0001556,5.74e-08,2;UBERON:0003350,1.70e-07,8;UBERON:0000485,7.64e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0.251085279189606,0.152826811495903,0.410502947249729,0.0787107813136792,0,0,0,2.75826367343678,0,0,1.08454080812422,0.568676929949686,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0.393419540227666,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0.552700035571697,0.579606171470105,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0.821127996921047,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0.370784442784429,0,0,0.132957960518865,0.715471872916026,0.571994910780128,0.74291500265913,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.357198913136319,0,0,0,0.949265659568129,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0.23486899728753,0.485618833104395,0.561803226808994,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0.554128230968366,0,0.30648779579902,0.150238058906597,0.340296549480063,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0,0.302256294682921,0,0.193260853163297,0.272746120590835,0.860413786167011,0.243947412259191,0.530119073285941,0.69716365721711,0,0,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0,0.330881918197182,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,1.7658523976586,0.983907508344908,0,0.219500570817251,0,0.301586917234893,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0,0.425325291727159,0,0.290633938513962,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.411309970813294,0,0,0,0,0.51336800074665,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0.224170287987055,0.197030760201927,0.646882724578552,0.256686072559497,0.254094624222463,0,0,0,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.213455115606889,0,0,0,0.496215615637554,0.306923946576125,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.846016147141356,0.40101294060657,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,0.206082023295445,0.27470839445503,0.495056999523528,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0,0.426133137080504,0.0890320356467374,0,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0.743212700502875,0.721346064882224,0.142283686696828,0.637705090915289,0.199579371432817,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0.47003968731907,0,0.338583555603207,0.642352300414798,0.201799707191048,0,0.343505344755765,0.307240764308458,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0.540911356951966,0,0,0,0,0.121360521749513,0.111443384277478,0.568272293612826,0,0,0,0,0.140669416410513,0.222617410045812,0.16480387422676,1.05562704063997,0,0.276283915531148,0.503865495708552,0.409074730008619,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.341380344856499,0,0,0,0,0.694499979733169,0,0,0,0.110579259931225,0,0,0.435753854075961,1.11538995422883,0.0769502585037971,0.113942055847001,0,0.179515288819544,0.869178975376065,0.31900115973192,0.457987967009312,0.533034776018635,0,0.627921025580099,0,0.225595660617181,0,0.167821586975843,0,0.635746315921515,0.210998064528027,0.489698424477443,0.848118428603645,1.08194319871046,0,0.0884575645033392,0.611030144933625,1.18608451472249,0.370691816839509,0.313265848516366,0,0,0,0.364909578431332,0.391329237864179,0,0,0,0.30607276163049,0,1.80388103297391,0.311064574191741,0,0,0.313932918407225,0,0,0,0.173559738335131,0.0979923974143777,1.48000651186684,0.17472666824203,0,0.483781656445426,0.438535902517113,1.23173185579814,0,0.0882561266915003,0,0.548167698587004,0.397429223405979,0.126621591911757,0.195551382734803,0,0,0.19980960958213,0.288180834308212,0,0.514784993585894,0.14405479798815,0.248505071130865,0.235694034616795,0.271808412147228,0,0.407992870545287,0,0,0,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0.393915911536118,0.3296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| 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| ||
|short_description=p3@MRE11A | |short_description=p3@MRE11A | ||
}} | }} |
Latest revision as of 03:24, 25 September 2015
Short description: | p3@MRE11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRE11A_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000536550_5end |
EntrezGene: | MRE11A |
HGNC: | 7230 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.23e-14 | 1 |
lower urinary tract cell | 1.23e-14 | 1 |
epithelial cell of cervix | 5.02e-08 | 2 |
epithelial cell of large intestine | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.23e-14 | 1 |
wall of urinary bladder | 1.23e-14 | 1 |
mucosa of urinary bladder | 1.23e-14 | 1 |
uterine cervix | 8.86e-10 | 6 |
neck of organ | 8.86e-10 | 6 |
uterine epithelium | 5.02e-08 | 2 |
cervix epithelium | 5.02e-08 | 2 |
urinary bladder | 5.74e-08 | 2 |
lower urinary tract | 5.74e-08 | 2 |
epithelium of mucosa | 1.70e-07 | 8 |
simple columnar epithelium | 7.64e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.27e-12 | 10 |
cervical cancer | 1.50e-11 | 5 |
squamous cell carcinoma | 3.96e-09 | 14 |