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FFCP PHASE1:Hg19::chr8:110346720..110346722,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:110346720..110346722,-
|DHSsupport=supported 
|short_description=p5@NUDCD1
|DPIdataset=robust
|description=CAGE_peak_5_at_NUDCD1_5end
|association_with_transcript=-106bp_to_ENST00000239690_5end
|EntrezGene=84955
|EntrezGene=84955
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=24306
|HGNC=24306
|TSSclassifier=strong
|UniProt=Q96RS6
|UniProt=Q96RS6
|association_with_transcript=-106bp_to_ENST00000239690_5end
|cluster_id=chr8:110346720..110346722,-
|description=CAGE_peak_5_at_NUDCD1_5end
|id=chr8:110346720..110346722,-
|ontology_enrichment_celltype=CL:0000135!8.78e-12!3;CL:0000386!8.78e-12!3;CL:0000388!8.78e-12!3
|ontology_enrichment_celltype_v019=CL:0000135;7.89e-38;3!CL:0000388;7.89e-38;3
|ontology_enrichment_celltype_v019_2=CL:0000135,8.41e-38,3;CL:0000388,8.41e-38,3
|ontology_enrichment_development_v019=UBERON:0008801;1.33e-13;1!UBERON:0006222;1.33e-13;1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000043!8.78e-12!3;UBERON:0001829!5.40e-08!2
|ontology_enrichment_uberon_v019=UBERON:0007846;7.89e-38;3!UBERON:0000043;7.89e-38;3!UBERON:0007845;7.89e-38;3!UBERON:0003112;1.33e-13;1!UBERON:0001831;1.33e-13;1!UBERON:0011158;1.33e-13;1!UBERON:0003128;1.33e-13;1!UBERON:0001567;1.33e-13;1!UBERON:0001703;1.33e-13;1!UBERON:0002241;1.33e-13;1!UBERON:0001829;1.93e-07;2!UBERON:0004089;1.93e-07;2
|ontology_enrichment_uberon_v019_2=UBERON:0007846,8.41e-38,3;UBERON:0000043,8.41e-38,3;UBERON:0007845,8.41e-38,3;UBERON:0003112,1.10e-13,1;UBERON:0011158,1.10e-13,1;UBERON:0003128,1.10e-13,1;UBERON:0001703,1.10e-13,1;UBERON:0002241,1.10e-13,1;UBERON:0004761,1.10e-13,1;UBERON:0009617,1.10e-13,1;UBERON:0001831,1.83e-13,1;UBERON:0001567,1.83e-13,1;UBERON:0008801,1.83e-13,1;UBERON:0005253,1.75e-07,2;UBERON:0001829,2.25e-07,2;UBERON:0004089,2.25e-07,2
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|short_description=p5@NUDCD1
}}
}}

Latest revision as of 03:30, 25 September 2015

Short description:p5@NUDCD1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_NUDCD1_5end
Coexpression cluster:NA
Association with transcript: -106bp_to_ENST00000239690_5end
EntrezGene:NUDCD1
HGNC: 24306
UniProt: Q96RS6
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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