FFCP PHASE1:Hg19::chr19:11039216..11039248,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=78992 | |EntrezGene=78992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28476 | |HGNC=28476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_uc002mqb.2_5end | |association_with_transcript=31bp_to_uc002mqb.2_5end | ||
|cluster_id=chr19:11039216..11039248,- | |||
|description=CAGE_peak_2_at_YIPF2_5end | |description=CAGE_peak_2_at_YIPF2_5end | ||
|id=chr19:11039216..11039248,- | |id=chr19:11039216..11039248,- | ||
|ontology_enrichment_celltype=CL:0000066!3.69e-24!254;CL:0002076!6.44e-15!43;CL:0000223!9.48e-13!59;CL:0002159!1.44e-07!13;CL:0002251!2.01e-07!21;CL:0002368!4.72e-07!13 | |ontology_enrichment_celltype=CL:0000066!3.69e-24!254;CL:0002076!6.44e-15!43;CL:0000223!9.48e-13!59;CL:0002159!1.44e-07!13;CL:0002251!2.01e-07!21;CL:0002368!4.72e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.91e-19;42!CL:0002251;2.26e-12;20!CL:0002368;1.15e-11;13!CL:0002159;6.77e-10;14!CL:0002202;3.25e-08;9!CL:0002632;3.25e-08;9!CL:0000349;4.50e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.86e-33,253;CL:0002076,2.53e-25,42;CL:0000223,1.97e-21,58;CL:0002251,2.81e-12,20;CL:0002368,9.14e-12,13;CL:0002159,6.30e-10,14;CL:0002202,3.09e-08,9;CL:0002632,3.09e-08,9;CL:0000349,4.66e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;1.41e-11;58 | |||
|ontology_enrichment_disease=DOID:305!7.18e-16!106;DOID:0050687!4.50e-11!143;DOID:1749!6.08e-07!14;DOID:299!9.33e-07!25 | |ontology_enrichment_disease=DOID:305!7.18e-16!106;DOID:0050687!4.50e-11!143;DOID:1749!6.08e-07!14;DOID:299!9.33e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;2.70e-10;25!DOID:1749;1.51e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.19e-17,106;DOID:0050687,6.24e-12,143;DOID:299,2.41e-10,25;DOID:1749,2.39e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.44e-23!169;UBERON:0000925!6.44e-23!169;UBERON:0006595!6.44e-23!169;UBERON:0001007!1.46e-17!155;UBERON:0001555!1.46e-17!155;UBERON:0007026!1.46e-17!155;UBERON:0004921!8.49e-16!129;UBERON:0004185!8.49e-16!129;UBERON:0000077!8.49e-14!130;UBERON:0001004!9.74e-14!72;UBERON:0000464!2.27e-11!104;UBERON:0000466!3.21e-11!126;UBERON:0001041!3.85e-10!98;UBERON:0000065!7.66e-10!53;UBERON:0005911!9.90e-10!82;UBERON:0005156!8.17e-09!59;UBERON:0000990!8.17e-09!59;UBERON:0000161!1.15e-08!35;UBERON:0003104!1.53e-08!238;UBERON:0009142!1.53e-08!238;UBERON:0005153!1.65e-08!37;UBERON:0005631!3.38e-08!14;UBERON:0000158!3.38e-08!14;UBERON:0008947!5.88e-08!38;UBERON:0003258!5.88e-08!38;UBERON:0009569!1.30e-07!113;UBERON:0000072!1.40e-07!46;UBERON:0000481!1.41e-07!347;UBERON:0005178!1.73e-07!34;UBERON:0002224!1.73e-07!34;UBERON:0003133!2.05e-07!48;UBERON:0001048!2.80e-07!168;UBERON:0000166!4.93e-07!21;UBERON:0000915!6.04e-07!52;UBERON:0005181!6.46e-07!35;UBERON:0005177!9.31e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.61e-08;10!UBERON:0000158;1.61e-08;10!UBERON:0006554;3.49e-08;30!UBERON:0001008;3.49e-08;30!UBERON:0004921;5.72e-08;33!UBERON:0000161;1.22e-07;19!UBERON:0000166;1.22e-07;19!UBERON:0003135;1.32e-07;11!UBERON:0003101;2.09e-07;22!UBERON:0000079;2.09e-07;22!UBERON:0005911;2.74e-07;36!UBERON:0000365;6.86e-07;5!UBERON:0000344;9.71e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.20e-19,160;UBERON:0000925,1.20e-19,160;UBERON:0006595,1.20e-19,160;UBERON:0006554,8.85e-14,47;UBERON:0001008,2.74e-13,48;UBERON:0005631,3.92e-13,14;UBERON:0000158,3.92e-13,14;UBERON:0001007,5.37e-13,145;UBERON:0001555,5.37e-13,145;UBERON:0007026,5.37e-13,145;UBERON:0004921,1.89e-10,118;UBERON:0003124,5.17e-10,7;UBERON:0005177,7.36e-10,101;UBERON:0001004,1.09e-09,74;UBERON:0005911,2.06e-09,82;UBERON:0005156,7.83e-09,59;UBERON:0000990,7.83e-09,59;UBERON:0009569,8.45e-09,112;UBERON:0000161,2.56e-08,36;UBERON:0000166,3.65e-08,22;UBERON:0004175,4.47e-08,25;UBERON:0003133,6.69e-08,48;UBERON:0003135,1.69e-07,11;UBERON:0003101,2.62e-07,22;UBERON:0000079,2.62e-07,22;UBERON:0001041,3.69e-07,87;UBERON:0005153,4.16e-07,37;UBERON:0000365,6.43e-07,5 | |||
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| ||
|short_description=p2@YIPF2 | |short_description=p2@YIPF2 | ||
}} | }} |
Latest revision as of 03:31, 25 September 2015
Short description: | p2@YIPF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YIPF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_uc002mqb.2_5end |
EntrezGene: | YIPF2 |
HGNC: | 28476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.86e-33 | 253 |
endo-epithelial cell | 2.53e-25 | 42 |
endodermal cell | 1.97e-21 | 58 |
epithelial cell of alimentary canal | 2.81e-12 | 20 |
respiratory epithelial cell | 9.14e-12 | 13 |
general ecto-epithelial cell | 6.30e-10 | 14 |
epithelial cell of tracheobronchial tree | 3.09e-08 | 9 |
epithelial cell of lower respiratory tract | 3.09e-08 | 9 |
extraembryonic cell | 4.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.20e-19 | 160 |
endoderm | 1.20e-19 | 160 |
presumptive endoderm | 1.20e-19 | 160 |
urinary system structure | 8.85e-14 | 47 |
renal system | 2.74e-13 | 48 |
extraembryonic membrane | 3.92e-13 | 14 |
membranous layer | 3.92e-13 | 14 |
digestive system | 5.37e-13 | 145 |
digestive tract | 5.37e-13 | 145 |
primitive gut | 5.37e-13 | 145 |
subdivision of digestive tract | 1.89e-10 | 118 |
chorion | 5.17e-10 | 7 |
trunk region element | 7.36e-10 | 101 |
respiratory system | 1.09e-09 | 74 |
endo-epithelium | 2.06e-09 | 82 |
reproductive structure | 7.83e-09 | 59 |
reproductive system | 7.83e-09 | 59 |
subdivision of trunk | 8.45e-09 | 112 |
orifice | 2.56e-08 | 36 |
oral opening | 3.65e-08 | 22 |
internal genitalia | 4.47e-08 | 25 |
reproductive organ | 6.69e-08 | 48 |
male reproductive organ | 1.69e-07 | 11 |
male organism | 2.62e-07 | 22 |
male reproductive system | 2.62e-07 | 22 |
foregut | 3.69e-07 | 87 |
epithelial bud | 4.16e-07 | 37 |
urothelium | 6.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.19e-17 | 106 |
cell type cancer | 6.24e-12 | 143 |
adenocarcinoma | 2.41e-10 | 25 |
squamous cell carcinoma | 2.39e-08 | 14 |