FFCP PHASE1:Hg19::chr12:85674018..85674039,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:85674018..85674039,+
|short_description=p3@ALX1
|description=CAGE_peak_3_at_ALX1_5end
|association_with_transcript=0bp_to_NM_006982,uc001tae.3_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8092 | |EntrezGene=8092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1494 | |HGNC=1494 | ||
|TSSclassifier=strong | |||
|UniProt=Q15699 | |UniProt=Q15699 | ||
|association_with_transcript=0bp_to_NM_006982,uc001tae.3_5end | |||
|cluster_id=chr12:85674018..85674039,+ | |||
|description=CAGE_peak_3_at_ALX1_5end | |||
|id=chr12:85674018..85674039,+ | |||
|ontology_enrichment_celltype=CL:0000710!2.26e-10!20;CL:0000133!2.62e-09!59;CL:0000333!3.86e-09!41;CL:0000148!4.08e-09!10;CL:0000541!4.08e-09!10;CL:0000147!3.21e-08!14;CL:0000075!2.68e-07!27;CL:0000221!8.97e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000710;8.83e-17;20!CL:0000148;8.91e-15;10!CL:0000075;9.36e-12;27!CL:0002567;3.13e-10;3!CL:0000147;3.28e-10;14!CL:0000708;2.99e-09;3!CL:0000197;1.64e-08;6!CL:0000098;1.64e-08;6!CL:0002167;1.64e-08;6!CL:0002077;1.13e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000710,9.26e-17,20;CL:0000148,8.80e-15,10;CL:0000541,8.80e-15,10;CL:0000075,9.69e-12,27;CL:0002567,3.24e-10,3;CL:0000147,3.25e-10,14;CL:0000708,2.72e-09,3;CL:0002077,8.28e-09,34;CL:0000133,9.74e-09,59;CL:0000197,1.76e-08,6;CL:0000098,1.76e-08,6;CL:0002167,1.76e-08,6;CL:0000333,2.04e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.27e-08!143;DOID:3095!9.06e-08!22;DOID:2994!9.06e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;2.33e-07;10!DOID:3095;3.12e-07;22!DOID:2994;3.12e-07;22!DOID:1909;5.54e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.14e-07,10;DOID:3095,3.92e-07,22;DOID:2994,3.92e-07,22;DOID:0050687,4.03e-07,143;DOID:1909,5.56e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;2.99e-09;3!UBERON:0005284;3.81e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,2.72e-09,3;UBERON:0005284,5.50e-09,5 | |||
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| ||
|short_description=p3@ALX1 | |||
}} | }} |
Latest revision as of 03:59, 25 September 2015
Short description: | p3@ALX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_006982, uc001tae.3_5end |
EntrezGene: | ALX1 |
HGNC: | 1494 |
UniProt: | Q15699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 9.26e-17 | 20 |
melanocyte | 8.80e-15 | 10 |
melanoblast | 8.80e-15 | 10 |
columnar/cuboidal epithelial cell | 9.69e-12 | 27 |
light melanocyte | 3.24e-10 | 3 |
pigment cell | 3.25e-10 | 14 |
leptomeningeal cell | 2.72e-09 | 3 |
ecto-epithelial cell | 8.28e-09 | 34 |
neurectodermal cell | 9.74e-09 | 59 |
receptor cell | 1.76e-08 | 6 |
sensory epithelial cell | 1.76e-08 | 6 |
olfactory epithelial cell | 1.76e-08 | 6 |
migratory neural crest cell | 2.04e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 2.72e-09 | 3 |
brain vasculature | 5.50e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.14e-07 | 10 |
germ cell and embryonal cancer | 3.92e-07 | 22 |
germ cell cancer | 3.92e-07 | 22 |
cell type cancer | 4.03e-07 | 143 |
melanoma | 5.56e-07 | 2 |