FFCP PHASE1:Hg19::chr12:85674018..85674039,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8092 | |EntrezGene=8092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1494 | |HGNC=1494 | ||
|TSSclassifier=strong | |||
|UniProt=Q15699 | |UniProt=Q15699 | ||
|association_with_transcript=0bp_to_NM_006982,uc001tae.3_5end | |association_with_transcript=0bp_to_NM_006982,uc001tae.3_5end | ||
|cluster_id=chr12:85674018..85674039,+ | |||
|description=CAGE_peak_3_at_ALX1_5end | |description=CAGE_peak_3_at_ALX1_5end | ||
|id=chr12:85674018..85674039,+ | |id=chr12:85674018..85674039,+ | ||
|ontology_enrichment_celltype=CL:0000710!2.26e-10!20;CL:0000133!2.62e-09!59;CL:0000333!3.86e-09!41;CL:0000148!4.08e-09!10;CL:0000541!4.08e-09!10;CL:0000147!3.21e-08!14;CL:0000075!2.68e-07!27;CL:0000221!8.97e-07!71 | |ontology_enrichment_celltype=CL:0000710!2.26e-10!20;CL:0000133!2.62e-09!59;CL:0000333!3.86e-09!41;CL:0000148!4.08e-09!10;CL:0000541!4.08e-09!10;CL:0000147!3.21e-08!14;CL:0000075!2.68e-07!27;CL:0000221!8.97e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000710;8.83e-17;20!CL:0000148;8.91e-15;10!CL:0000075;9.36e-12;27!CL:0002567;3.13e-10;3!CL:0000147;3.28e-10;14!CL:0000708;2.99e-09;3!CL:0000197;1.64e-08;6!CL:0000098;1.64e-08;6!CL:0002167;1.64e-08;6!CL:0002077;1.13e-07;34 | |ontology_enrichment_celltype_v019=CL:0000710;8.83e-17;20!CL:0000148;8.91e-15;10!CL:0000075;9.36e-12;27!CL:0002567;3.13e-10;3!CL:0000147;3.28e-10;14!CL:0000708;2.99e-09;3!CL:0000197;1.64e-08;6!CL:0000098;1.64e-08;6!CL:0002167;1.64e-08;6!CL:0002077;1.13e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000710,9.26e-17,20;CL:0000148,8.80e-15,10;CL:0000541,8.80e-15,10;CL:0000075,9.69e-12,27;CL:0002567,3.24e-10,3;CL:0000147,3.25e-10,14;CL:0000708,2.72e-09,3;CL:0002077,8.28e-09,34;CL:0000133,9.74e-09,59;CL:0000197,1.76e-08,6;CL:0000098,1.76e-08,6;CL:0002167,1.76e-08,6;CL:0000333,2.04e-07,41 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!3.27e-08!143;DOID:3095!9.06e-08!22;DOID:2994!9.06e-08!22 | |ontology_enrichment_disease=DOID:0050687!3.27e-08!143;DOID:3095!9.06e-08!22;DOID:2994!9.06e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:171;2.33e-07;10!DOID:3095;3.12e-07;22!DOID:2994;3.12e-07;22!DOID:1909;5.54e-07;2 | |ontology_enrichment_disease_v019=DOID:171;2.33e-07;10!DOID:3095;3.12e-07;22!DOID:2994;3.12e-07;22!DOID:1909;5.54e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:171,3.14e-07,10;DOID:3095,3.92e-07,22;DOID:2994,3.92e-07,22;DOID:0050687,4.03e-07,143;DOID:1909,5.56e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003210;2.99e-09;3!UBERON:0005284;3.81e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0003210;2.99e-09;3!UBERON:0005284;3.81e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,2.72e-09,3;UBERON:0005284,5.50e-09,5 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0.367663080345869,0,1.42879565254528,0,0.450445921933289,0,0.949265659568129,1.28241220751285,0,0,0,0,0.12663051166458,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0,0,0,0,1.05950199351452,1.15235184896,1.40592859100278,4.05808099879417,0,0.747243402759005,0.352303495931295,0,0,0.204154171254893,1.84251475967652,1.44656093646072,0,0.247266929278557,0,0,5.89176398839232,3.87867411603089,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95078044320891,0,0,0,0,0,0,0.243947412259191,0,0.464775771478074,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0.217879444092406,0.949082476444386,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0,0.651616610620649,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.57221572944282,7.25778008560728,5.86087236050235,5.13217338068116,4.11309970813294,8.10926256178577,4.85904935471983,2.46688385559794,2.61576041299968,1.39342743059805,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,5.19927153827018,8.3861624734666,11.5122762974772,0.35142424497814,0,0,2.0694614258501,0,0,0.260650843404249,1.17480694477644,1.71571711905428,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,1.07946785661859,0.887808626565635,0.492762936082855,0.519254429183621,0.581051892299796,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,1.08378575017541,0,0,0,0,0,0,0.256450125116389,0,0,0,0.457847324091717,0.330037999682352,0,0,0,0.096670718292122,0,0.15350367472613,0,1.39646318328756,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,3.48017367190598,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0.709522128141196,0,0,0.75894634753143,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.500547425135725,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.333926115068718,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0.583209226766509,1.90987494426621,0,0,0,0,0,0.219385397153973,0.21787692703798,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0,0.843992258112108,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,1.05226393590145,1.03688191397247,0,0.661983911750998,0,1.19472429772959,0,0,0,0,0,0.17472666824203,0,7.45023750925956,9.57470053829031,7.06192930657599,0,0,1.80784592624426,0,1.58971689362392,0,0.391102765469606,0.480952921509202,0,0.19980960958213,0,0,1.02956998717179,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.196854963029498,0,0,0,0.321506296930038,0,0,0,0,0,0,0.709251365692784,3.61936658131487,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,2.71949019648302,0,0,0,0,2.39521573038061,0,0,0,0,0,0,0,0.638341257770182,0,0,0.306345576763462,0.327872630709804,0.314108192500469,0,0,0,0,0,0,2.49027542885215,0.124980407962107,3.94287705608284,2.28372266835974,0,0,0,0.74627401443437,0.233713309847224,0,0.189403005275089,0,0,0.457680136793847,0.302461847526478,0.310874401165561,0,0,0,0.931577741257556,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.911579868532147,0,0,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,1.84105950251841,0,1.24415452006595,0.383683113910955,1.07824811396682,7.23423332537123,0.54604819096007,6.44983613825296,0.212574920101683,18.8382361673683,1.11728983594649,0,0,0,26.4506957768013,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.943757786781923,0,0,0,0,5.37073799713942,0.526472298444801,0,0,3.66669372273991,0,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,1.42953088353313,0,0,1.73858272302579,0.801711364730253,0,0,0,0,1.18332000730565,0.766920642832419,0,0,4.03268301363616,1.91107787795487,0,0,0.365753774946808,0,0,0,0,0,0,7.96764608209709,0,0.549702583727146,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.630832124175395,0.218531143927391,2.15387451719443,0.203977659483963,0,1.01084389488329,0,0.151557396436479,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0,0,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| ||
|short_description=p3@ALX1 | |short_description=p3@ALX1 | ||
}} | }} |
Latest revision as of 03:59, 25 September 2015
Short description: | p3@ALX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_006982, uc001tae.3_5end |
EntrezGene: | ALX1 |
HGNC: | 1494 |
UniProt: | Q15699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 9.26e-17 | 20 |
melanocyte | 8.80e-15 | 10 |
melanoblast | 8.80e-15 | 10 |
columnar/cuboidal epithelial cell | 9.69e-12 | 27 |
light melanocyte | 3.24e-10 | 3 |
pigment cell | 3.25e-10 | 14 |
leptomeningeal cell | 2.72e-09 | 3 |
ecto-epithelial cell | 8.28e-09 | 34 |
neurectodermal cell | 9.74e-09 | 59 |
receptor cell | 1.76e-08 | 6 |
sensory epithelial cell | 1.76e-08 | 6 |
olfactory epithelial cell | 1.76e-08 | 6 |
migratory neural crest cell | 2.04e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 2.72e-09 | 3 |
brain vasculature | 5.50e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.14e-07 | 10 |
germ cell and embryonal cancer | 3.92e-07 | 22 |
germ cell cancer | 3.92e-07 | 22 |
cell type cancer | 4.03e-07 | 143 |
melanoma | 5.56e-07 | 2 |