FFCP PHASE1:Hg19::chr22:47070544..47070559,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23151 | |EntrezGene=23151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29113 | |HGNC=29113 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000408031,uc003bhy.2_5end | |association_with_transcript=39bp_to_ENST00000408031,uc003bhy.2_5end | ||
|cluster_id=chr22:47070544..47070559,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_6_at_GRAMD4_5end | |description=CAGE_peak_6_at_GRAMD4_5end | ||
|id=chr22:47070544..47070559,+ | |id=chr22:47070544..47070559,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.23e-23!172;CL:0000566!4.23e-23!172;CL:0000738!3.27e-21!140;CL:0000988!4.46e-21!182;CL:0002032!2.53e-17!165;CL:0000837!2.53e-17!165;CL:0002087!7.31e-16!119;CL:0002031!1.28e-12!124;CL:0000763!2.34e-10!112;CL:0000049!2.34e-10!112;CL:0000766!1.63e-09!76;CL:0000784!4.60e-09!3;CL:0000767!1.39e-08!3;CL:0000860!1.47e-08!45;CL:0000557!2.86e-08!71;CL:0002057!3.16e-08!42;CL:0000842!8.47e-08!3;CL:0000542!2.37e-07!53;CL:0000051!2.37e-07!53;CL:0002009!2.41e-07!65;CL:0000623!2.85e-07!3;CL:0000825!2.85e-07!3;CL:0000134!6.45e-07!358;CL:0002393!7.05e-07!9;CL:0002397!7.05e-07!9;CL:0002194!9.59e-07!63;CL:0000576!9.59e-07!63;CL:0000040!9.59e-07!63;CL:0000559!9.59e-07!63 | |ontology_enrichment_celltype=CL:0000037!4.23e-23!172;CL:0000566!4.23e-23!172;CL:0000738!3.27e-21!140;CL:0000988!4.46e-21!182;CL:0002032!2.53e-17!165;CL:0000837!2.53e-17!165;CL:0002087!7.31e-16!119;CL:0002031!1.28e-12!124;CL:0000763!2.34e-10!112;CL:0000049!2.34e-10!112;CL:0000766!1.63e-09!76;CL:0000784!4.60e-09!3;CL:0000767!1.39e-08!3;CL:0000860!1.47e-08!45;CL:0000557!2.86e-08!71;CL:0002057!3.16e-08!42;CL:0000842!8.47e-08!3;CL:0000542!2.37e-07!53;CL:0000051!2.37e-07!53;CL:0002009!2.41e-07!65;CL:0000623!2.85e-07!3;CL:0000825!2.85e-07!3;CL:0000134!6.45e-07!358;CL:0002393!7.05e-07!9;CL:0002397!7.05e-07!9;CL:0002194!9.59e-07!63;CL:0000576!9.59e-07!63;CL:0000040!9.59e-07!63;CL:0000559!9.59e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000784;5.00e-67;3!CL:0000767;5.61e-30;3!CL:0002032;2.09e-23;1!CL:0000557;2.09e-23;1!CL:0000451;6.40e-19;10!CL:0000094;6.51e-12;8!CL:0000081;6.35e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.01e-67,3;CL:0000767,5.61e-30,3;CL:0000451,6.40e-19,10;CL:0000094,6.51e-12,8;CL:0000081,6.35e-09,11;CL:0000037,4.03e-08,168;CL:0000738,9.83e-08,136;CL:0000988,1.08e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.49e-09!102;UBERON:0003061!7.49e-09!102;UBERON:0002371!9.27e-08!80;UBERON:0002193!1.65e-07!112;UBERON:0001474!7.04e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@GRAMD4 | |short_description=p6@GRAMD4 | ||
}} | }} |
Latest revision as of 06:02, 25 September 2015
Short description: | p6@GRAMD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GRAMD4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 39bp_to_ENST00000408031, uc003bhy.2_5end |
EntrezGene: | GRAMD4 |
HGNC: | 29113 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.01e-67 | 3 |
basophil | 5.61e-30 | 3 |
dendritic cell | 6.40e-19 | 10 |
granulocyte | 6.51e-12 | 8 |
blood cell | 6.35e-09 | 11 |
hematopoietic stem cell | 4.03e-08 | 168 |
leukocyte | 9.83e-08 | 136 |
hematopoietic cell | 1.08e-07 | 177 |