FFCP PHASE1:Hg19::chr11:114466471..114466474,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54827 | |EntrezGene=54827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23117 | |HGNC=23117 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000424261_5end | |association_with_transcript=0bp_to_ENST00000424261_5end | ||
|cluster_id=chr11:114466471..114466474,- | |||
|coexpression_cluster_id=C190 | |coexpression_cluster_id=C190 | ||
|description=CAGE_peak_4_at_FAM55D_5end | |description=CAGE_peak_4_at_FAM55D_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;9.99e-30;1!UBERON:0008801;2.05e-29;1!UBERON:0001045;4.20e-29;1 | |ontology_enrichment_development_v019=UBERON:0006298;9.99e-30;1!UBERON:0008801;2.05e-29;1!UBERON:0001045;4.20e-29;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@FAM55D | |short_description=p4@FAM55D | ||
}} | }} |
Latest revision as of 07:31, 25 September 2015
Short description: | p4@FAM55D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM55D_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 0bp_to_ENST00000424261_5end |
EntrezGene: | FAM55D |
HGNC: | 23117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.58e-57 | 2 |
colon | 2.49e-50 | 9 |
saliva-secreting gland | 6.48e-43 | 6 |
gland of oral region | 6.48e-43 | 6 |
gland of foregut | 6.48e-43 | 6 |
oral gland | 6.48e-43 | 6 |
oral cavity | 6.48e-43 | 6 |
large intestine | 2.51e-41 | 11 |
submandibular gland | 9.99e-30 | 1 |
submandibular gland primordium | 9.99e-30 | 1 |
parotid gland | 2.37e-29 | 1 |
cheek | 2.37e-29 | 1 |
parotid gland primordium | 2.37e-29 | 1 |
vermiform appendix | 4.20e-29 | 1 |
caecum | 4.20e-29 | 1 |
midgut | 4.20e-29 | 1 |
gland of gut | 3.92e-26 | 10 |
intestine | 1.53e-25 | 17 |
gastrointestinal system | 7.03e-18 | 25 |
midface | 2.05e-15 | 2 |
oral opening | 2.54e-12 | 22 |
subdivision of digestive tract | 7.31e-12 | 118 |
digestive system | 1.06e-09 | 145 |
digestive tract | 1.06e-09 | 145 |
primitive gut | 1.06e-09 | 145 |
mouth | 1.61e-09 | 29 |
stomodeum | 1.61e-09 | 29 |
adult organism | 3.77e-09 | 114 |
exocrine gland | 6.01e-09 | 31 |
exocrine system | 6.01e-09 | 31 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |
orifice | 8.54e-08 | 36 |
lower digestive tract | 6.77e-07 | 5 |