Personal tools

FFCP PHASE1:Mm9::chr8:47237766..47237831,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=102141
|EntrezGene=102141
|HGNC=
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=E9Q1K0
|UniProt=E9Q1K0
|association_with_transcript=-255bp_to_ENSMUST00000110378_5end
|association_with_transcript=-255bp_to_ENSMUST00000110378_5end
|cluster_id=chr8:47237766..47237831,-
|description=CAGE_peak_1_at_Snx25_5end
|description=CAGE_peak_1_at_Snx25_5end
|id=chr8:47237766..47237831,-
|id=chr8:47237766..47237831,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!1.29e-07!15
|ontology_enrichment_uberon=UBERON:0000344!1.29e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.56e-10,31;UBERON:0011216,3.91e-08,194;UBERON:0000344,1.29e-07,15;UBERON:0001007,1.57e-07,116;UBERON:0001555,1.57e-07,116;UBERON:0007026,1.57e-07,116;UBERON:0004119,6.14e-07,118;UBERON:0000925,6.14e-07,118;UBERON:0006595,6.14e-07,118;UBERON:0004921,8.16e-07,114
|phase1_expression=9.12848428497326,133.657581125875,162.889727701454,134.596574031539,189.839481649666,33.575854382378,27.3326789496765,12.7832090207161,13.51571732656,18.4910975794375,7.87602653837323,11.0883301003518,8.73123722649149,9.61624426608971,13.3243904726265,8.70643649776252,6.29605690315332,21.293696161681,22.0754238105239,31.4048342330542,16.4983982893075,7.84398514486994,7.83599367416806,28.6386436800198,43.5877634027623,110.826769074199,66.3373474084975,48.2655561216391,24.1329742709595,33.5200072580708,23.5034341294623,12.065582795733,12.3012957516914,0,8.37669697278696,7.81302833184914,11.0251452381679,2.09265815368454,4.6880120671428,3.14114246384279,0,1.36609096991689,1.45653105909346,6.16894408080329,7.29913904780505,5.32285581268876,2.34717403304412,2.8343270329458,4.17403747195497,3.88859798148567,3.49966054063406,1.43752564364972,29.3619560601039,12.3311564141929,9.07453257684653,10.5476368774738,12.6074713573053,10.3134418455488,6.47412674750713,6.87688273053643,10.775133859605,2.71075625655306,3.55717918444456,1.3498495759221,0,1.4209602298922,1.49800055259202,4.61061966385865,4.87341177849845,3.51015439662396,3.78584930432488,9.14083150092171,6.84692476950002,5.02212276781312,3.83381884072945,6.43453150627015,9.91042928994498,17.6208526557559,14.5926206593431,8.17694983927202,6.86157327018072,6.77187381723788,10.3297709630511,12.9435400307286,15.279824777681,14.142172102736,14.8066548031067,14.5391567743734,6.36100023998746,4.1564358058732,7.8263411949453,9.46466264679525,4.75979933595425,9.17495425784289,5.84798775702902,9.40856462904405,9.12888730856387,5.28333999991979,6.49465011507172,4.59341446863442,15.4927761754349,2.56652954828636,0,21.3320010945999,5.84525810730278,3.80039798212648,4.54972000513305,13.4736978068491,4.66088190564909,8.90652834388949,8.67426633830679,6.08930956624282,7.14908041493781,7.988299949289,8.46638691377075,6.53466274914312,10.3821886448437,3.61498392299779,9.73071607144862,9.70601099684455,9.27534377533653,5.33362778448744,18.6391761218122,24.8863677459815,21.5730108017859,39.0849294469145,2.51611761462433,4.19931911695385,2.1601938602421,16.926342252745,32.4825428001225,14.7015591972051,19.8159725019195,18.6672283851141,17.2464076984435,21.9025705141473,5.49932564791708,9.45492976636707,6.57079171927554,9.25944165900485,5.98554037628437,6.89706313300419,6.84236093260327,7.83665052745718,12.3146063463903,8.71173297936978,17.1474155944304,17.074422468775,3.44908788692548,8.69887968771969,10.9089696981648,6.57587197282724,7.50727572909114,6.96504333044333,8.84863186554157,10.5488161413801,2.80885274925294,1.80143534980301,3.40996199274711,4.14251545071004,4.92504725960302,6.48223421259654,7.81257627431194,5.90292695242211,5.39934895105824,3.48800917125612,10.9992094573844,9.69152341647507,7.07607354627966,8.70087559619205,8.99863785958999,11.8421989814519,6.58650345873152,8.18659154438268,15.7717461423095,10.1875566255492,72.3617134734518,23.2716498663919,6.61193576659225,7.43157349953403,7.60318021800351,9.07575860805041,10.6741461045538,12.935342575654,36.0642086773829,11.0348299665087,14.5774421104156,11.7384318504279,11.8928093142663,35.0539569375146,20.1008386383466,30.2694735346638,2.27601481143698,5.82667414309617,6.76246414038483,5.29493452397817,6.7883370508669,7.43439690837377,9.16929788301731,12.3992524302866,10.3619160375307,12.5865107200237,10.6722945751374,6.00642380577939,6.87956482896211,6.07127703439105,6.8972441272091,7.47649195232492,11.2035374783825,11.2201493605816,6.97181475132652,5.76578967694971,18.6898668485561,7.44281895337007,11.2333562321242,11.8712072635143,9.32866550313943,10.6137574699941,43.7865060694853,7.76914788258988,6.35563408123901,8.48725428875941,12.4385831592906,18.2581820611579,36.4206770555601,52.6860849216057,31.2117585330258,26.575762757853,34.6016847986747,46.2094547498381,44.8980952851329,57.5703253154416,3.01582567878545,0.54390568381871,4.91764273019036,9.10591262805617,15.5734072288158,12.7760738385501,8.36068221421045,7.82659874333556,12.6203287766503,8.98009111882268,12.0637102730367,13.3822526853429,7.12955757063661,10.7569081699756,8.50102473517278,10.8134667427185,8.30104333687699,12.8528526568723,5.67760340833074,6.7664929393557,5.04949573996086,8.08353602565424,7.96470830039777,3.8844901784797,5.44182402536552,3.77210159511796,2.36241514304618,3.68922177532713,9.8202751403924,7.63420831902762,6.41695281092498,6.95280867458795,9.48767477174989,3.09406629744561,7.14923172082955,4.68158844481407,2.97524972700335,4.92975180572662,5.14286677562593,8.02659679209317,9.21474515371877,6.08929898229199,5.39744928546534,4.2366414172764,2.64634077665954,3.46261131177108,5.16686165426898,5.60910201831849,6.68485126417564,6.56563598980245,23.6099477670179,12.6089205367147,14.5240248678175,8.66824845445534,9.81530995059472,8.2882121082064,9.97867862363484,12.3540213531522,3.73952545986482,2.51912614182584,3.73139929271944,3.81868247206045,5.53587988766987,7.5228202836934,7.23635783506068,5.43629569637619,4.80397640241591,4.72025212346872,4.62859352061881,5.75863072364865,9.46189305030088,6.83473244395618,16.3470952218415,7.32631075615496,7.44563207056939,13.0282296190512,13.1743019947286,14.8681390431885,12.5572245350957,12.7600297147071,9.54220034273969,20.7762343910365,16.7057403629562,13.9044893076398,4.05450430580328,4.10843828659309,7.66532855568991,12.1738153053887,9.93406773906325,15.0244311899961,10.0428878478713,9.59181274507402,12.95515713135,15.0231015853892,17.9322500561144,17.6067670201803,19.9859502730483,3.85441652145859,3.99574716073316,3.6782681209885,4.02923079273788,7.53439416725543,5.44279178808428,4.39563898241436,3.42989406526505,4.51414893631827,12.9892923801925,12.889106622201,8.02053718815155,18.0445841460872,16.4419804744954,9.06472676867641,9.45031500324528,13.9599572999508,14.0474146785103,12.9440077937955,2.28332164685189,3.59122386060928,4.95127456686989,10.4535888339366,5.44994222832754,4.41224420280034,8.88986911206461,6.18105171716683,8.3438994493872,7.58091635291392,5.83002389747551,7.73367999682912,7.11675456771106,9.92389862275474,9.0748040949869,10.0021675169445,9.73428337936786,10.0312794641127,11.5384052224926,9.42073088860143,5.82877729055206,5.85670160325814,5.7224685587357,9.59286349773368,8.84628175904108,9.64606529965112,10.6098224266208,6.83981249738391,8.14824683075171,7.2948495315506,12.2194068667899,10.3429706494342,7.7753898202241,9.60608415352989,10.0311437710194,10.4920442733937,9.59119594626174,7.09074478359384,11.6685882561994,7.50010825006353,7.65163857547391
|phase1_expression=9.12848428497326,133.657581125875,162.889727701454,134.596574031539,189.839481649666,33.575854382378,27.3326789496765,12.7832090207161,13.51571732656,18.4910975794375,7.87602653837323,11.0883301003518,8.73123722649149,9.61624426608971,13.3243904726265,8.70643649776252,6.29605690315332,21.293696161681,22.0754238105239,31.4048342330542,16.4983982893075,7.84398514486994,7.83599367416806,28.6386436800198,43.5877634027623,110.826769074199,66.3373474084975,48.2655561216391,24.1329742709595,33.5200072580708,23.5034341294623,12.065582795733,12.3012957516914,0,8.37669697278696,7.81302833184914,11.0251452381679,2.09265815368454,4.6880120671428,3.14114246384279,0,1.36609096991689,1.45653105909346,6.16894408080329,7.29913904780505,5.32285581268876,2.34717403304412,2.8343270329458,4.17403747195497,3.88859798148567,3.49966054063406,1.43752564364972,29.3619560601039,12.3311564141929,9.07453257684653,10.5476368774738,12.6074713573053,10.3134418455488,6.47412674750713,6.87688273053643,10.775133859605,2.71075625655306,3.55717918444456,1.3498495759221,0,1.4209602298922,1.49800055259202,4.61061966385865,4.87341177849845,3.51015439662396,3.78584930432488,9.14083150092171,6.84692476950002,5.02212276781312,3.83381884072945,6.43453150627015,9.91042928994498,17.6208526557559,14.5926206593431,8.17694983927202,6.86157327018072,6.77187381723788,10.3297709630511,12.9435400307286,15.279824777681,14.142172102736,14.8066548031067,14.5391567743734,6.36100023998746,4.1564358058732,7.8263411949453,9.46466264679525,4.75979933595425,9.17495425784289,5.84798775702902,9.40856462904405,9.12888730856387,5.28333999991979,6.49465011507172,4.59341446863442,15.4927761754349,2.56652954828636,0,21.3320010945999,5.84525810730278,3.80039798212648,4.54972000513305,13.4736978068491,4.66088190564909,8.90652834388949,8.67426633830679,6.08930956624282,7.14908041493781,7.988299949289,8.46638691377075,6.53466274914312,10.3821886448437,3.61498392299779,9.73071607144862,9.70601099684455,9.27534377533653,5.33362778448744,18.6391761218122,24.8863677459815,21.5730108017859,39.0849294469145,2.51611761462433,4.19931911695385,2.1601938602421,16.926342252745,32.4825428001225,14.7015591972051,19.8159725019195,18.6672283851141,17.2464076984435,21.9025705141473,5.49932564791708,9.45492976636707,6.57079171927554,9.25944165900485,5.98554037628437,6.89706313300419,6.84236093260327,7.83665052745718,12.3146063463903,8.71173297936978,17.1474155944304,17.074422468775,3.44908788692548,8.69887968771969,10.9089696981648,6.57587197282724,7.50727572909114,6.96504333044333,8.84863186554157,10.5488161413801,2.80885274925294,1.80143534980301,3.40996199274711,4.14251545071004,4.92504725960302,6.48223421259654,7.81257627431194,5.90292695242211,5.39934895105824,3.48800917125612,10.9992094573844,9.69152341647507,7.07607354627966,8.70087559619205,8.99863785958999,11.8421989814519,6.58650345873152,8.18659154438268,15.7717461423095,10.1875566255492,72.3617134734518,23.2716498663919,6.61193576659225,7.43157349953403,7.60318021800351,9.07575860805041,10.6741461045538,12.935342575654,36.0642086773829,11.0348299665087,14.5774421104156,11.7384318504279,11.8928093142663,35.0539569375146,20.1008386383466,30.2694735346638,2.27601481143698,5.82667414309617,6.76246414038483,5.29493452397817,6.7883370508669,7.43439690837377,9.16929788301731,12.3992524302866,10.3619160375307,12.5865107200237,10.6722945751374,6.00642380577939,6.87956482896211,6.07127703439105,6.8972441272091,7.47649195232492,11.2035374783825,11.2201493605816,6.97181475132652,5.76578967694971,18.6898668485561,7.44281895337007,11.2333562321242,11.8712072635143,9.32866550313943,10.6137574699941,43.7865060694853,7.76914788258988,6.35563408123901,8.48725428875941,12.4385831592906,18.2581820611579,36.4206770555601,52.6860849216057,31.2117585330258,26.575762757853,34.6016847986747,46.2094547498381,44.8980952851329,57.5703253154416,3.01582567878545,0.54390568381871,4.91764273019036,9.10591262805617,15.5734072288158,12.7760738385501,8.36068221421045,7.82659874333556,12.6203287766503,8.98009111882268,12.0637102730367,13.3822526853429,7.12955757063661,10.7569081699756,8.50102473517278,10.8134667427185,8.30104333687699,12.8528526568723,5.67760340833074,6.7664929393557,5.04949573996086,8.08353602565424,7.96470830039777,3.8844901784797,5.44182402536552,3.77210159511796,2.36241514304618,3.68922177532713,9.8202751403924,7.63420831902762,6.41695281092498,6.95280867458795,9.48767477174989,3.09406629744561,7.14923172082955,4.68158844481407,2.97524972700335,4.92975180572662,5.14286677562593,8.02659679209317,9.21474515371877,6.08929898229199,5.39744928546534,4.2366414172764,2.64634077665954,3.46261131177108,5.16686165426898,5.60910201831849,6.68485126417564,6.56563598980245,23.6099477670179,12.6089205367147,14.5240248678175,8.66824845445534,9.81530995059472,8.2882121082064,9.97867862363484,12.3540213531522,3.73952545986482,2.51912614182584,3.73139929271944,3.81868247206045,5.53587988766987,7.5228202836934,7.23635783506068,5.43629569637619,4.80397640241591,4.72025212346872,4.62859352061881,5.75863072364865,9.46189305030088,6.83473244395618,16.3470952218415,7.32631075615496,7.44563207056939,13.0282296190512,13.1743019947286,14.8681390431885,12.5572245350957,12.7600297147071,9.54220034273969,20.7762343910365,16.7057403629562,13.9044893076398,4.05450430580328,4.10843828659309,7.66532855568991,12.1738153053887,9.93406773906325,15.0244311899961,10.0428878478713,9.59181274507402,12.95515713135,15.0231015853892,17.9322500561144,17.6067670201803,19.9859502730483,3.85441652145859,3.99574716073316,3.6782681209885,4.02923079273788,7.53439416725543,5.44279178808428,4.39563898241436,3.42989406526505,4.51414893631827,12.9892923801925,12.889106622201,8.02053718815155,18.0445841460872,16.4419804744954,9.06472676867641,9.45031500324528,13.9599572999508,14.0474146785103,12.9440077937955,2.28332164685189,3.59122386060928,4.95127456686989,10.4535888339366,5.44994222832754,4.41224420280034,8.88986911206461,6.18105171716683,8.3438994493872,7.58091635291392,5.83002389747551,7.73367999682912,7.11675456771106,9.92389862275474,9.0748040949869,10.0021675169445,9.73428337936786,10.0312794641127,11.5384052224926,9.42073088860143,5.82877729055206,5.85670160325814,5.7224685587357,9.59286349773368,8.84628175904108,9.64606529965112,10.6098224266208,6.83981249738391,8.14824683075171,7.2948495315506,12.2194068667899,10.3429706494342,7.7753898202241,9.60608415352989,10.0311437710194,10.4920442733937,9.59119594626174,7.09074478359384,11.6685882561994,7.50010825006353,7.65163857547391
|short_description=p1@Snx25
|short_description=p1@Snx25
}}
}}

Latest revision as of 14:16, 25 September 2015

Short description:p1@Snx25
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Snx25_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: -255bp_to_ENSMUST00000110378_5end
EntrezGene:Snx25
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Snx25

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5133.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6162.89
CD326+ enterocyte, pool1.CNhs13542.11848-124I3134.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I4189.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I733.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I827.33
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.09
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.73
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.71
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.29
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A422.08
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A631.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D128.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D243.59
GP2+ M cell, pool1.CNhs13228.11845-124H9110.83
GP2+ M cell, pool2.CNhs13231.11846-124I166.34
GP2+ M cell, pool3.CNhs13240.11847-124I248.27
Ileum epithelium, pool1.CNhs13199.10252-104B924.13
Ileum epithelium, pool2.CNhs13232.10253-104C133.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.55
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.54
Mouse Schwann, donor1.CNhs12507.11728-123D96.36
Mouse Schwann, donor2.CNhs12573.11746-123F94.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.47
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D78.91
adrenal gland, embryo E14.CNhs11038.406-44C58.67
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I17.15
adrenal gland, embryo E18.CNhs11026.1262-18F57.99
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I36.53
amnion, adult pregnant day17.5.CNhs10488.583-22A810.38
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F59.71
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B224.89
cerebellum, neonate N30.CNhs11135.1395-42I221.57
colon, adult.CNhs10468.36-18H739.08
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A416.93
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F114.70
cortex, adult.CNhs10473.12-14D519.82
cortex, neonate N30.CNhs11107.1392-42F218.67
diencephalon, adult.CNhs10482.20-12F217.25
diencephalon, neonate N30.CNhs11201.1388-42B221.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.45
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G49.26
eyeball, embryo E12.CNhs11016.345-16C65.99
eyeball, embryo E14.CNhs10521.399-16E26.90
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C612.31
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G817.15
eyeball, neonate N16.CNhs11188.777-19A217.07
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H28.70
forelimb, embryo E13.CNhs10589.384-1E210.91
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B58.85
gonad, embryo E13.CNhs11044.1564-45I610.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I96.48
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C85.90
heart, embryo E16.CNhs11021.457-17C65.40
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G311.00
heart, neonate N00.CNhs11213.639-21E39.69
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G18.70
heart, neonate N16.CNhs11209.782-15G19.00
heart, neonate N20.CNhs11127.821-26I611.84
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D28.19
hippocampus, adult.CNhs10478.13-16E815.77
hippocampus, neonate N00.CNhs11228.627-43G110.19
intestinal mucosa, adult.CNhs10506.860-29I372.36
intestine, adult.CNhs10496.178-9A323.27
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D310.67
intestine, embryo E18.CNhs10526.1289-20F712.94
intestine, neonate N00.CNhs11126.644-26D136.06
intestine, neonate N01.CNhs11192.1322-23E911.03
intestine, neonate N06.CNhs11102.688-20B814.58
intestine, neonate N07.CNhs11095.720-20F211.74
intestine, neonate N10.CNhs11098.755-23A511.89
intestine, neonate N20.CNhs11187.827-18D135.05
intestine, neonate N25.CNhs11121.1352-25E320.10
intestine, neonate N30.CNhs11131.1384-42G130.27
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F85.83
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G77.43
kidney, neonate N10.CNhs11206.758-6D59.17
kidney, neonate N20.CNhs11113.832-19I112.40
kidney, neonate N25.CNhs11122.1353-25F310.36
kidney, neonate N30.CNhs11203.1385-42H112.59
liver, adult pregnant day01.CNhs10466.508-5B210.67
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H66.88
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A311.20
liver, embryo E18.CNhs10579.499-43G411.22
liver, neonate N00.CNhs11117.641-24F46.97
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B911.23
liver, neonate N20.CNhs11220.823-25A311.87
liver, neonate N25.CNhs11198.1368-26H19.33
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B143.79
lung, embryo E12.CNhs10522.354-16G27.77
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B612.44
lung, embryo E17.CNhs10605.480-44A618.26
lung, embryo E18.CNhs10583.1287-20I636.42
lung, neonate N00.CNhs11224.640-42C652.69
lung, neonate N06.CNhs11212.683-20E531.21
lung, neonate N07.CNhs11111.715-19A326.58
lung, neonate N10.CNhs11219.750-23E634.60
lung, neonate N20.CNhs11109.822-18A446.21
lung, neonate N25.CNhs11119.1359-25C744.90
lung, neonate N30.CNhs11133.1394-42H257.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C215.57
medulla oblongata, neonate N30.CNhs11200.1396-42A312.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.06
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.76
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I75.68
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F59.21
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H35.61
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I123.61
spinal cord, adult.CNhs10505.24-13C912.61
spleen, adult.CNhs10465.25-2G214.52
spleen, embryo E16.CNhs11035.461-43C18.67
spleen, embryo E18.CNhs11011.1271-21F29.82
spleen, neonate N10.CNhs11116.752-24D18.29
spleen, neonate N20.CNhs11112.824-19H19.98
spleen, neonate N25.CNhs11099.1354-25G312.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.73
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D47.24
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B84.72
stomach, neonate N07.CNhs11210.718-18A94.63
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I19.46
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G516.35
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C57.45
testis, embryo E16.CNhs11033.470-26G513.03
testis, embryo E17.CNhs11029.486-18I513.17
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B712.56
testis, neonate N07.CNhs11222.726-26I412.76
testis, neonate N10.CNhs11204.763-44D99.54
testis, neonate N20.CNhs11110.839-18H320.78
testis, neonate N30.CNhs11130.1391-42E216.71
thymus, adult.CNhs10471.38-12B513.90
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C57.67
thymus, embryo E17.CNhs10581.478-18C112.17
thymus, embryo E18.CNhs10595.1273-19G49.93
thymus, neonate N02.CNhs11181.1541-43F815.02
thymus, neonate N03.CNhs11137.2104-43C710.04
thymus, neonate N06.CNhs11197.681-26C49.59
thymus, neonate N07.CNhs11211.713-19D312.96
thymus, neonate N10.CNhs11194.748-24E415.02
thymus, neonate N20.CNhs11186.820-7A217.93
thymus, neonate N25.CNhs11125.1362-25G717.61
thymus, neonate N30.CNhs11132.1393-42G219.99
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D210.45
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.34
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.61
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B39.59
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine9.56e-1031
organ system subdivision3.91e-08194
mucosa1.29e-0715
digestive system1.57e-07116
digestive tract1.57e-07116
primitive gut1.57e-07116
endoderm-derived structure6.14e-07118
endoderm6.14e-07118
presumptive endoderm6.14e-07118
subdivision of digestive tract8.16e-07114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:47237766..47237831,-&oldid=4195915"