Personal tools

FFCP PHASE1:Mm9::chr11:70461088..70461109,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:70461088..70461109,+
|DHSsupport=NA
|short_description=p3@Rnf167
|DPIdataset=NA
|description=CAGE_peak_3_at_Rnf167_5end
|association_with_transcript=0bp_to_NM_027445,uc007jvs.1,uc007jvt.1,uc007jvu.1_5end
|EntrezGene=70510
|EntrezGene=70510
|HGNC=
|HGNC=
|MCL_coexpression_id=359
|TSSclassifier=NA
|UniProt=A2CFC3,Q91XF4
|UniProt=A2CFC3,Q91XF4
|association_with_transcript=0bp_to_NM_027445,uc007jvs.1,uc007jvt.1,uc007jvu.1_5end
|cluster_id=chr11:70461088..70461109,+
|description=CAGE_peak_3_at_Rnf167_5end
|id=chr11:70461088..70461109,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0001007!4.67e-10!128;UBERON:0001555!4.67e-10!128;UBERON:0007026!4.67e-10!128;UBERON:0004921!2.63e-09!126;UBERON:0004185!2.63e-09!126;UBERON:0007023!5.58e-09!51;UBERON:0005409!8.26e-09!59;UBERON:0004923!2.35e-08!24;UBERON:0000160!9.77e-08!43
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.99e-11,118;UBERON:0000925,1.99e-11,118;UBERON:0006595,1.99e-11,118;UBERON:0001007,8.50e-11,116;UBERON:0001555,8.50e-11,116;UBERON:0007026,8.50e-11,116;UBERON:0005409,1.18e-10,47;UBERON:0000160,3.34e-10,31;UBERON:0004921,5.19e-10,114;UBERON:0007023,5.56e-09,51;UBERON:0004923,2.35e-08,24
|phase1_expression=6.56610273129655,26.1731555729521,41.4049307844478,62.9125559518207,60.608383323508,9.06548068324205,9.34450562382103,32.9264474776019,11.9670413828917,9.12851652655775,2.05461561870606,0.957265907944037,61.4610620453029,66.876607850533,7.32841475994458,11.3386149738303,9.09430441566591,14.5112596064789,13.0258711925452,19.0975343309114,9.43980520676875,5.75887516965135,2.87319768052829,30.7185451763341,35.099620003277,28.711598205751,23.26114779259,18.0995835456147,73.1590164907039,46.3735438758273,12.1951780860418,19.6859508772486,31.3683041668131,31.6963362030877,7.51014211353314,7.48055904113216,6.73758875665818,85.7989843010661,49.2241267049994,46.593613213668,130.587390342885,120.216005352686,92.7324774289503,1.88845226963366,2.93993100536592,2.20256102594018,3.12956537739216,2.61630187656536,3.29529274101708,3.30530828426282,2.2397827460058,2.87505128729943,9.06026072711776,29.0144856804538,43.6921938885203,0.771778308107841,1.14613375975503,1.03134418455488,6.27181028664753,8.46385566835253,9.50747105259269,2.71075625655306,6.22506357277798,0.899899717281399,1.97773272513395,0.7104801149461,3.29560121570245,9.98967593836042,4.14758449233911,4.05017814995072,2.10324961351382,4.28476476605705,3.97563373712904,3.42974237801871,5.17565543498476,6.43453150627015,9.91042928994498,9.19348834213351,7.68032666281217,6.98997324970027,8.87430142943374,5.2091337055676,6.97957497503452,10.6924895906019,8.55670187550137,5.30331453852602,3.98640706237488,8.94717339961443,0.908714319998209,0.68014404096107,4.92769630792852,12.0459342777394,4.0798280022465,21.0484244738749,11.695975514058,15.6809410484067,13.2017754923847,0.170430322578058,0.519572009205738,0,9.15482228548423,1.28326477414318,0,0,4.97929394325792,2.78695852022608,3.0331466700887,19.1828917928021,12.6879562987114,6.08612770165782,3.12273588179045,4.26251669636998,6.22661842591358,4.37095657602605,7.4080885495494,4.77533047052767,33.6185156118748,6.50697106139602,7.07688441559899,2.42650274921114,5.96272099843063,8.24287930329878,70.8288692628864,9.66176630138106,7.74952815209784,43.1722423302519,0.599075622529601,0.599902730993408,0.762421362438388,8.83764772488454,8.23501085073528,4.64921102817598,5.9100268865374,7.16003280524926,7.68815764870372,8.92326946872667,3.7680564624617,10.2013715900276,35.6339089391481,32.1976039506305,2.86264974517948,5.28774840196988,2.70093194708024,2.26057226753573,3.06164246180975,3.97152532883034,2.71735001223214,10.0894314588216,4.52692785158969,3.9712276835242,5.27853372491847,3.06874025398605,5.00485048606076,8.00979983000983,8.23128545631774,5.57295947091781,0.702213187313235,0.51469581422943,1.13665399758237,2.07125772535502,2.34526059981096,1.98068267607116,1.89395788468168,2.16440654922144,1.85120535464854,1.16266972375204,1.07309360559848,1.86824547787471,0.822799249567402,1.31333971263276,2.51313309592153,1.75439984910399,1.53685080703735,4.69722465661301,5.04695876553905,2.26390147234426,129.854581712633,29.0895623329899,1.91959425481711,3.25131340604614,4.51036114627327,7.05892336181699,11.1189021922435,25.3000082729704,65.4850104931426,39.3630501790386,39.9622981992429,43.1735544329297,34.3136793329651,61.1197197884871,48.8471992716809,69.3011630925198,3.98302592001472,3.54170389090159,6.76246414038483,5.49858585182348,4.26695471768777,7.01358198903186,8.22074982615345,9.88987991463334,10.5189147653721,16.4118228015995,13.0439155918346,4.67166296005063,5.50365186316968,6.2961391467759,7.30296436998611,7.47649195232492,6.11102044275408,6.90470729881945,13.943629502653,8.78596522201861,2.87536413054709,7.07067800570156,7.80094182786401,11.8712072635143,8.07288360848605,16.4030797263545,8.49864674766381,1.70542270593436,0.325929952884052,1.18821560042632,2.34690248288502,2.84760637651087,4.52282917683426,5.26860849216057,4.57141917907954,5.09368786192182,2.87018583583477,5.57135270033509,6.04397436530635,8.10034728056465,4.52373851817817,2.71952841909355,15.2446924635901,22.0749397043786,6.90367536947505,6.68106613575558,1.14754461763673,1.51482556322624,1.57754109708128,2.73307121007647,1.93881057959519,0.716906393857656,1.11399337041197,0.283076530788832,1.61924280669958,1.16902343164525,1.97643888973262,3.21321316421807,6.24536374916382,5.87616492101942,4.56083486190013,11.71287873105,2.65490276679926,7.04063844849446,3.32555912661226,5.84675747243284,7.67784921490009,6.45613810682248,16.5394107627662,6.18007340111759,4.63446591900138,4.42451461110142,14.7586052004998,2.06271086496374,11.5749465956288,6.66226047915848,8.40831444587904,7.50179622610573,9.75371285032505,10.7021290561242,9.54384319492302,19.4857567433344,8.68285319835728,67.5744306055586,16.9806866502321,10.2229476823718,13.8859406958479,6.93598636673792,10.9822556482886,12.1464265811345,53.0495122666328,6.11903496634682,12.9861869406368,4.74689796315412,12.4080333337707,13.7508973613424,15.1730592770338,13.7266903923914,2.88963330989554,4.05859211738608,3.73139929271944,14.3200592702267,3.32152793260192,4.06638934253697,4.21220829205025,6.48173717644853,9.17122767733946,6.87808166562586,6.86023682520288,9.16145796944104,45.8837005452947,23.6108938973032,2.81846469342095,6.72824457197905,7.77654905148359,3.69457257853691,5.42471258606471,3.8859908862879,5.51579021635044,3.6457227756306,5.34782656571125,2.65742532908607,2.59227005632079,37.289312234125,4.05450430580328,4.21114924375792,5.97635785697857,6.80301443536429,16.6892338016263,21.0342036659945,18.4611908968222,19.9913570897332,17.67997914396,24.8032415436628,37.2289104425854,32.6158143160717,39.2706391330072,10.2028672626845,12.2092274355736,8.79195794772862,16.7884616364078,7.72758376128762,7.50729901804728,8.60812634056146,15.0057865355346,25.0786052017682,3.3885110557024,1.84130094602871,5.72895513439397,3.26521046453006,2.74033007908257,3.7769694869485,8.77529250301348,4.5032120322422,7.70342095273148,4.14208249401456,1.97195960409936,2.39414924040619,3.41467211508268,5.10524105843418,3.98265008993166,1.47074806760011,4.88942801163553,3.5025959730612,4.49286893428541,3.28506375292937,3.29523089857312,2.82939512079114,4.49479235855436,4.48176066834085,4.59483751644906,4.76293691283074,3.70829843023538,4.82273051159263,2.06042950401653,2.06078488188156,4.11443102862498,4.43689515398344,3.81497903915713,5.52316383202848,4.98779716201252,3.80765735512544,4.39027134894654,3.6829759601298,3.39510284614654,2.24456908663095,3.32178050747688,3.44765688314472,3.6830793885272,3.40861050609125,4.82266527452853,6.49507502638659,3.74290573512653,7.30561583764214,5.54736162999646,6.17655973534643,5.33296021926969
|phase1_expression=6.56610273129655,26.1731555729521,41.4049307844478,62.9125559518207,60.608383323508,9.06548068324205,9.34450562382103,32.9264474776019,11.9670413828917,9.12851652655775,2.05461561870606,0.957265907944037,61.4610620453029,66.876607850533,7.32841475994458,11.3386149738303,9.09430441566591,14.5112596064789,13.0258711925452,19.0975343309114,9.43980520676875,5.75887516965135,2.87319768052829,30.7185451763341,35.099620003277,28.711598205751,23.26114779259,18.0995835456147,73.1590164907039,46.3735438758273,12.1951780860418,19.6859508772486,31.3683041668131,31.6963362030877,7.51014211353314,7.48055904113216,6.73758875665818,85.7989843010661,49.2241267049994,46.593613213668,130.587390342885,120.216005352686,92.7324774289503,1.88845226963366,2.93993100536592,2.20256102594018,3.12956537739216,2.61630187656536,3.29529274101708,3.30530828426282,2.2397827460058,2.87505128729943,9.06026072711776,29.0144856804538,43.6921938885203,0.771778308107841,1.14613375975503,1.03134418455488,6.27181028664753,8.46385566835253,9.50747105259269,2.71075625655306,6.22506357277798,0.899899717281399,1.97773272513395,0.7104801149461,3.29560121570245,9.98967593836042,4.14758449233911,4.05017814995072,2.10324961351382,4.28476476605705,3.97563373712904,3.42974237801871,5.17565543498476,6.43453150627015,9.91042928994498,9.19348834213351,7.68032666281217,6.98997324970027,8.87430142943374,5.2091337055676,6.97957497503452,10.6924895906019,8.55670187550137,5.30331453852602,3.98640706237488,8.94717339961443,0.908714319998209,0.68014404096107,4.92769630792852,12.0459342777394,4.0798280022465,21.0484244738749,11.695975514058,15.6809410484067,13.2017754923847,0.170430322578058,0.519572009205738,0,9.15482228548423,1.28326477414318,0,0,4.97929394325792,2.78695852022608,3.0331466700887,19.1828917928021,12.6879562987114,6.08612770165782,3.12273588179045,4.26251669636998,6.22661842591358,4.37095657602605,7.4080885495494,4.77533047052767,33.6185156118748,6.50697106139602,7.07688441559899,2.42650274921114,5.96272099843063,8.24287930329878,70.8288692628864,9.66176630138106,7.74952815209784,43.1722423302519,0.599075622529601,0.599902730993408,0.762421362438388,8.83764772488454,8.23501085073528,4.64921102817598,5.9100268865374,7.16003280524926,7.68815764870372,8.92326946872667,3.7680564624617,10.2013715900276,35.6339089391481,32.1976039506305,2.86264974517948,5.28774840196988,2.70093194708024,2.26057226753573,3.06164246180975,3.97152532883034,2.71735001223214,10.0894314588216,4.52692785158969,3.9712276835242,5.27853372491847,3.06874025398605,5.00485048606076,8.00979983000983,8.23128545631774,5.57295947091781,0.702213187313235,0.51469581422943,1.13665399758237,2.07125772535502,2.34526059981096,1.98068267607116,1.89395788468168,2.16440654922144,1.85120535464854,1.16266972375204,1.07309360559848,1.86824547787471,0.822799249567402,1.31333971263276,2.51313309592153,1.75439984910399,1.53685080703735,4.69722465661301,5.04695876553905,2.26390147234426,129.854581712633,29.0895623329899,1.91959425481711,3.25131340604614,4.51036114627327,7.05892336181699,11.1189021922435,25.3000082729704,65.4850104931426,39.3630501790386,39.9622981992429,43.1735544329297,34.3136793329651,61.1197197884871,48.8471992716809,69.3011630925198,3.98302592001472,3.54170389090159,6.76246414038483,5.49858585182348,4.26695471768777,7.01358198903186,8.22074982615345,9.88987991463334,10.5189147653721,16.4118228015995,13.0439155918346,4.67166296005063,5.50365186316968,6.2961391467759,7.30296436998611,7.47649195232492,6.11102044275408,6.90470729881945,13.943629502653,8.78596522201861,2.87536413054709,7.07067800570156,7.80094182786401,11.8712072635143,8.07288360848605,16.4030797263545,8.49864674766381,1.70542270593436,0.325929952884052,1.18821560042632,2.34690248288502,2.84760637651087,4.52282917683426,5.26860849216057,4.57141917907954,5.09368786192182,2.87018583583477,5.57135270033509,6.04397436530635,8.10034728056465,4.52373851817817,2.71952841909355,15.2446924635901,22.0749397043786,6.90367536947505,6.68106613575558,1.14754461763673,1.51482556322624,1.57754109708128,2.73307121007647,1.93881057959519,0.716906393857656,1.11399337041197,0.283076530788832,1.61924280669958,1.16902343164525,1.97643888973262,3.21321316421807,6.24536374916382,5.87616492101942,4.56083486190013,11.71287873105,2.65490276679926,7.04063844849446,3.32555912661226,5.84675747243284,7.67784921490009,6.45613810682248,16.5394107627662,6.18007340111759,4.63446591900138,4.42451461110142,14.7586052004998,2.06271086496374,11.5749465956288,6.66226047915848,8.40831444587904,7.50179622610573,9.75371285032505,10.7021290561242,9.54384319492302,19.4857567433344,8.68285319835728,67.5744306055586,16.9806866502321,10.2229476823718,13.8859406958479,6.93598636673792,10.9822556482886,12.1464265811345,53.0495122666328,6.11903496634682,12.9861869406368,4.74689796315412,12.4080333337707,13.7508973613424,15.1730592770338,13.7266903923914,2.88963330989554,4.05859211738608,3.73139929271944,14.3200592702267,3.32152793260192,4.06638934253697,4.21220829205025,6.48173717644853,9.17122767733946,6.87808166562586,6.86023682520288,9.16145796944104,45.8837005452947,23.6108938973032,2.81846469342095,6.72824457197905,7.77654905148359,3.69457257853691,5.42471258606471,3.8859908862879,5.51579021635044,3.6457227756306,5.34782656571125,2.65742532908607,2.59227005632079,37.289312234125,4.05450430580328,4.21114924375792,5.97635785697857,6.80301443536429,16.6892338016263,21.0342036659945,18.4611908968222,19.9913570897332,17.67997914396,24.8032415436628,37.2289104425854,32.6158143160717,39.2706391330072,10.2028672626845,12.2092274355736,8.79195794772862,16.7884616364078,7.72758376128762,7.50729901804728,8.60812634056146,15.0057865355346,25.0786052017682,3.3885110557024,1.84130094602871,5.72895513439397,3.26521046453006,2.74033007908257,3.7769694869485,8.77529250301348,4.5032120322422,7.70342095273148,4.14208249401456,1.97195960409936,2.39414924040619,3.41467211508268,5.10524105843418,3.98265008993166,1.47074806760011,4.88942801163553,3.5025959730612,4.49286893428541,3.28506375292937,3.29523089857312,2.82939512079114,4.49479235855436,4.48176066834085,4.59483751644906,4.76293691283074,3.70829843023538,4.82273051159263,2.06042950401653,2.06078488188156,4.11443102862498,4.43689515398344,3.81497903915713,5.52316383202848,4.98779716201252,3.80765735512544,4.39027134894654,3.6829759601298,3.39510284614654,2.24456908663095,3.32178050747688,3.44765688314472,3.6830793885272,3.40861050609125,4.82266527452853,6.49507502638659,3.74290573512653,7.30561583764214,5.54736162999646,6.17655973534643,5.33296021926969
|short_description=p3@Rnf167
}}
}}

Latest revision as of 14:51, 25 September 2015

Short description:p3@Rnf167
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf167_5end
Coexpression cluster:MCL_coexpression_mm9:359
Association with transcript: 0bp_to_NM_027445, uc007jvs.1, uc007jvt.1, uc007jvu.1_5end
EntrezGene:Rnf167
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rnf167

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I526.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I641.40
CD326+ enterocyte, pool1.CNhs13542.11848-124I362.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I460.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E461.46
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E866.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D130.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D235.10
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I123.26
GP2+ M cell, pool3.CNhs13240.11847-124I218.10
Ileum epithelium, pool1.CNhs13199.10252-104B973.16
Ileum epithelium, pool2.CNhs13232.10253-104C146.37
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G631.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G885.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H149.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H346.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9130.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2120.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H492.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.06
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.01
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A143.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.18
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.95
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C821.05
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.68
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.18
accessory axillary lymph node, adult.CNhs10475.1063-29H912.69
adrenal gland, adult.CNhs10508.49-24D76.09
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I34.78
amnion, adult pregnant day17.5.CNhs10488.583-22A833.62
aorta, adult.CNhs10498.46-23H16.51
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H470.83
cerebellum, adult.CNhs10494.15-8B29.66
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H743.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B28.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.20
epididymis, adult.CNhs10490.58-23B235.63
eyeball, adult.CNhs10484.31-12G432.20
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B58.23
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D24.70
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I3129.85
intestine, adult.CNhs10496.178-9A329.09
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F725.30
intestine, neonate N00.CNhs11126.644-26D165.49
intestine, neonate N01.CNhs11192.1322-23E939.36
intestine, neonate N06.CNhs11102.688-20B839.96
intestine, neonate N07.CNhs11095.720-20F243.17
intestine, neonate N10.CNhs11098.755-23A534.31
intestine, neonate N20.CNhs11187.827-18D161.12
intestine, neonate N25.CNhs11121.1352-25E348.85
intestine, neonate N30.CNhs11131.1384-42G169.30
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G77.01
kidney, neonate N10.CNhs11206.758-6D58.22
kidney, neonate N20.CNhs11113.832-19I19.89
kidney, neonate N25.CNhs11122.1353-25F310.52
kidney, neonate N30.CNhs11203.1385-42H116.41
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F84.67
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E16.30
liver, embryo E15.CNhs10520.433-16D77.30
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F413.94
liver, neonate N03.CNhs11123.1345-25G28.79
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A311.87
liver, neonate N25.CNhs11198.1368-26H18.07
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B18.50
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A45.57
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B615.24
mammary gland, adult pregnant day19.CNhs10476.588-5H222.07
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G611.71
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G916.54
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E66.66
pituitary gland, embryo E13.CNhs11009.370-44C78.41
pituitary gland, embryo E14.CNhs11037.398-44A57.50
pituitary gland, embryo E15.CNhs10592.427-16B99.75
pituitary gland, embryo E16.CNhs11036.449-43F610.70
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E919.49
placenta, adult pregnant day10.CNhs10472.539-13I78.68
placenta, adult pregnant day17.CNhs10464.577-18G367.57
prostate, adult.CNhs10470.859-1F816.98
skin, adult.CNhs10492.30-1C310.22
skin, neonate N00.CNhs11124.650-25G413.89
skin, neonate N03.CNhs11215.662-22H36.94
skin, neonate N06.CNhs11097.693-20I510.98
skin, neonate N10.CNhs11108.762-6C412.15
small intestine, neonate N16.CNhs11114.790-21I153.05
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G212.99
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F212.41
spleen, neonate N10.CNhs11116.752-24D113.75
spleen, neonate N20.CNhs11112.824-19H115.17
spleen, neonate N25.CNhs11099.1354-25G313.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.73
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B86.88
stomach, neonate N07.CNhs11210.718-18A96.86
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I145.88
submandibular gland, adult.CNhs10469.59-29C123.61
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F56.73
testis, embryo E15.CNhs11034.443-27C57.78
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D95.35
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B537.29
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I24.21
thymus, embryo E16.CNhs11002.456-26C55.98
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G416.69
thymus, neonate N02.CNhs11181.1541-43F821.03
thymus, neonate N03.CNhs11137.2104-43C718.46
thymus, neonate N06.CNhs11197.681-26C419.99
thymus, neonate N07.CNhs11211.713-19D317.68
thymus, neonate N10.CNhs11194.748-24E424.80
thymus, neonate N20.CNhs11186.820-7A237.23
thymus, neonate N25.CNhs11125.1362-25G732.62
thymus, neonate N30.CNhs11132.1393-42G239.27
tongue, adult.CNhs10499.32-1B410.20
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.79
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E58.61
vagina, adult.CNhs10502.89-27D515.01
vesicular gland, adult.CNhs10491.51-27F825.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.99e-11118
endoderm1.99e-11118
presumptive endoderm1.99e-11118
digestive system8.50e-11116
digestive tract8.50e-11116
primitive gut8.50e-11116
gastrointestinal system1.18e-1047
intestine3.34e-1031
subdivision of digestive tract5.19e-10114
adult organism5.56e-0951
organ component layer2.35e-0824
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:70461088..70461109,%2B&oldid=4197596"