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FFCP PHASE1:Mm9::chr5:143668400..143668405,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:143668400..143668405,-
|DHSsupport=NA
|short_description=p1@Actb
|DPIdataset=NA
|description=CAGE_peak_1_at_Actb_5end
|association_with_transcript=0bp_to_ENSMUST00000031564,ENSMUST00000163829,ENSMUST00000167386,NM_007393,uc009ajk.1_5end
|EntrezGene=11461
|EntrezGene=11461
|HGNC=
|HGNC=
|MCL_coexpression_id=462
|TSSclassifier=NA
|UniProt=F8WI82,E9Q2D1,E9QAZ1,B2RRX1,P60710,D3Z2K3
|UniProt=F8WI82,E9Q2D1,E9QAZ1,B2RRX1,P60710,D3Z2K3
|association_with_transcript=0bp_to_ENSMUST00000031564,ENSMUST00000163829,ENSMUST00000167386,NM_007393,uc009ajk.1_5end
|cluster_id=chr5:143668400..143668405,-
|description=CAGE_peak_1_at_Actb_5end
|id=chr5:143668400..143668405,-
|ontology_enrichment_celltype=CL:0000144!8.26e-18!121;CL:0000012!8.26e-18!121;CL:0002371!2.16e-17!118;CL:0000548!1.35e-15!115;CL:0000004!1.35e-15!115;CL:0000255!1.35e-15!115;CL:0000034!6.93e-10!97;CL:0000723!6.01e-09!91;CL:0000048!6.01e-09!91;CL:0000219!9.10e-09!54;CL:0000063!5.79e-08!66;CL:0002321!3.76e-07!70;CL:0000220!3.76e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000034,6.93e-10,97;CL:0000723,6.01e-09,91;CL:0000048,6.01e-09,91;CL:0000219,9.10e-09,54;CL:0002321,3.76e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.50e-08!48;UBERON:0002390!1.88e-07!45;UBERON:0003061!1.88e-07!45
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.13e-09,118;UBERON:0000925,3.13e-09,118;UBERON:0006595,3.13e-09,118;UBERON:0001007,3.57e-09,116;UBERON:0001555,3.57e-09,116;UBERON:0007026,3.57e-09,116;UBERON:0002193,1.50e-08,48;UBERON:0002405,1.50e-08,48;UBERON:0005409,1.54e-08,47;UBERON:0004921,1.97e-08,114;UBERON:0002390,1.88e-07,45;UBERON:0003061,1.88e-07,45;UBERON:0000160,2.46e-07,31
|phase1_expression=1785.33934752424,16152.3267425878,13946.1816865287,5313.9937284497,7394.22276546798,4381.98475544415,4419.25032214556,7580.7011959315,4396.12784918579,5035.66421929137,4158.71323022929,3920.72184246179,7212.1731498119,8379.77009427541,3237.49377508643,3172.38248946379,2539.40961760517,6692.68756915769,6185.91767212291,5425.82169823782,1798.24037024437,3492.06275373514,2990.47638585167,7920.10490554201,8309.8923880961,13145.318122521,9722.29825331032,8858.88426064764,10261.0746272247,8768.88430473727,7462.78379712559,3338.35625037728,2415.97448563219,1553.1204739513,1375.51141325557,1539.33281601964,1523.10339771727,23313.467426938,18256.6816601431,16454.8747968405,25080.4259551784,23459.1971808978,20063.2298286594,5252.03755548716,5199.82555611134,5413.52790825664,10369.0324866446,7115.68702878863,11741.1280362438,6238.47774169746,3945.51729351084,9862.8634410807,4155.97515205013,5559.90081851696,5669.56629773423,12461.3898221452,8090.2716766708,8449.80290405817,5124.87827003447,6031.02615468045,5279.81559120647,13392.8301300324,11286.0402574465,15288.3962968937,14862.6614293816,16275.6784731853,12664.695871834,13266.2896461426,5135.64280802659,5806.33539576935,5100.38031277101,3829.43709691739,4046.31167023356,4802.37427402149,3856.53421736078,5157.73661166883,1004.25683471442,1756.59471003793,1846.96495587307,5091.47013782413,3996.36324784046,4617.37611661512,1967.12341096373,1520.5845723056,1705.99243642808,3245.03924040698,3310.42632194074,3808.88627599419,4509.57053918444,4627.24662533848,3389.09560190002,2821.32989262197,8273.89118855591,2199.83020911574,2369.0848180142,1450.71106042117,2401.88047309322,6541.62707151359,6122.37677047581,5304.33369254923,1932.0900324965,5275.50148650261,3215.64212509787,2659.38946979346,6406.83586768587,6901.01601581074,6728.02483870175,2616.06686824338,4670.98048311133,2061.11910091509,3067.39406255205,2791.33950516571,2920.51465725072,2307.7143495012,1861.42923395821,1951.97916312385,5162.17251119693,2407.57929271653,8857.60545667409,2555.59269546917,2435.88194861814,2537.35219965662,5416.54458099863,927.822345729593,1157.61194855797,6786.21667161623,3631.35679352543,1632.33533103306,3468.00063727808,1162.67494306023,1627.78714482867,3702.40548500555,1575.02216526222,1554.74998056841,1394.67335508377,1418.15088047527,3244.39845354338,2853.64709185431,1454.16675202736,1341.35638942039,2695.96545774426,2642.72469046277,2748.82847360846,2191.2480513313,1696.69421583581,2034.95833300455,2063.87418515259,1228.32360426885,4063.24109879114,3057.27799807313,3060.84575595605,2941.82592491048,2544.41037766345,2900.94054712965,2720.43984331301,2246.69880384715,1710.59132429504,1950.43978802243,3987.66638701835,2098.80545310224,1919.59580094527,1730.21634857889,1823.40795347729,1370.46287412067,1457.51568255995,1214.29225948663,1467.45550565592,999.044269293502,1182.69164132818,1457.47874609421,996.416738128113,1258.05089179498,1874.07978412441,900.659276300855,1845.92516849591,3317.02727543385,8579.6541189573,6110.92369446118,3415.81133232177,3233.43118231289,3374.39447471901,3909.6351248235,4473.8014860711,5470.50855574498,7585.34704878902,5542.94332123659,4092.99387531239,4397.53490152556,4804.11007070224,7269.65137719534,5483.85460142074,4877.16892327271,3597.05174157519,2708.48948843884,3082.55657065875,2550.12192727902,2489.57412528364,2004.06091754596,2250.14570049245,1550.20177408178,1928.10137661992,1613.54131544146,1125.6306250499,2733.42336694677,2599.09959238188,2713.18624803564,2772.48927901667,2984.56735193616,2797.31960767068,2969.88722690472,2219.79338977701,2938.63080535204,2745.97274467247,3120.4018462004,2357.44462038051,2169.90514044364,2278.16775431476,1423.6908315433,4118.88762157428,3200.50994480349,3470.33917333294,3342.95971925656,3316.8772790614,4066.38190565752,4207.18330901941,3764.71346812051,3611.73642176105,4174.38793518976,3654.54384286095,3271.20335167028,4212.30476265479,3200.36042111594,7954.24022779661,19729.6347748399,2073.76993932128,2117.26265439621,1397.75343643372,1391.53714322264,5514.44369258061,1056.5908303503,4181.43043192365,4138.26025080007,3099.94269337498,3331.22504345858,3376.2911070446,4192.6464975134,4009.24518938815,3746.42784256511,3365.4801414367,1203.66965131609,2455.27959393263,3154.43216896543,2886.03114582666,3059.37093052567,1072.5807177869,2715.50141539347,2416.16986726229,1929.24136082308,2607.8110160301,2117.30586388983,2863.64391659706,2143.39486899937,2026.68759611714,1592.19318648064,1374.65865581798,1362.42052630855,1112.21619199763,2429.56434176447,2743.30960698087,2585.97632765616,2085.52114763314,2637.89644351702,2102.4428362333,2770.02210704462,3514.20882825406,2997.42380272306,1468.49860264799,2456.64028257511,2165.39942641879,2690.37864227025,3149.63929652276,2959.95284510269,6637.31013089833,1703.68767487256,3923.0245522379,4619.97003935674,4327.44052104805,3431.50818125446,3220.65269933507,4420.45186269643,3661.33538206764,3743.84130111018,3697.40209916355,2298.84684818039,3471.47119355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|phase1_expression=1785.33934752424,16152.3267425878,13946.1816865287,5313.9937284497,7394.22276546798,4381.98475544415,4419.25032214556,7580.7011959315,4396.12784918579,5035.66421929137,4158.71323022929,3920.72184246179,7212.1731498119,8379.77009427541,3237.49377508643,3172.38248946379,2539.40961760517,6692.68756915769,6185.91767212291,5425.82169823782,1798.24037024437,3492.06275373514,2990.47638585167,7920.10490554201,8309.8923880961,13145.318122521,9722.29825331032,8858.88426064764,10261.0746272247,8768.88430473727,7462.78379712559,3338.35625037728,2415.97448563219,1553.1204739513,1375.51141325557,1539.33281601964,1523.10339771727,23313.467426938,18256.6816601431,16454.8747968405,25080.4259551784,23459.1971808978,20063.2298286594,5252.03755548716,5199.82555611134,5413.52790825664,10369.0324866446,7115.68702878863,11741.1280362438,6238.47774169746,3945.51729351084,9862.8634410807,4155.97515205013,5559.90081851696,5669.56629773423,12461.3898221452,8090.2716766708,8449.80290405817,5124.87827003447,6031.02615468045,5279.81559120647,13392.8301300324,11286.0402574465,15288.3962968937,14862.6614293816,16275.6784731853,12664.695871834,13266.2896461426,5135.64280802659,5806.33539576935,5100.38031277101,3829.43709691739,4046.31167023356,4802.37427402149,3856.53421736078,5157.73661166883,1004.25683471442,1756.59471003793,1846.96495587307,5091.47013782413,3996.36324784046,4617.37611661512,1967.12341096373,1520.5845723056,1705.99243642808,3245.03924040698,3310.42632194074,3808.88627599419,4509.57053918444,4627.24662533848,3389.09560190002,2821.32989262197,8273.89118855591,2199.83020911574,2369.0848180142,1450.71106042117,2401.88047309322,6541.62707151359,6122.37677047581,5304.33369254923,1932.0900324965,5275.50148650261,3215.64212509787,2659.38946979346,6406.83586768587,6901.01601581074,6728.02483870175,2616.06686824338,4670.98048311133,2061.11910091509,3067.39406255205,2791.33950516571,2920.51465725072,2307.7143495012,1861.42923395821,1951.97916312385,5162.17251119693,2407.57929271653,8857.60545667409,2555.59269546917,2435.88194861814,2537.35219965662,5416.54458099863,927.822345729593,1157.61194855797,6786.21667161623,3631.35679352543,1632.33533103306,3468.00063727808,1162.67494306023,1627.78714482867,3702.40548500555,1575.02216526222,1554.74998056841,1394.67335508377,1418.15088047527,3244.39845354338,2853.64709185431,1454.16675202736,1341.35638942039,2695.96545774426,2642.72469046277,2748.82847360846,2191.2480513313,1696.69421583581,2034.95833300455,2063.87418515259,1228.32360426885,4063.24109879114,3057.27799807313,3060.84575595605,2941.82592491048,2544.41037766345,2900.94054712965,2720.43984331301,2246.69880384715,1710.59132429504,1950.43978802243,3987.66638701835,2098.80545310224,1919.59580094527,1730.21634857889,1823.40795347729,1370.46287412067,1457.51568255995,1214.29225948663,1467.45550565592,999.044269293502,1182.69164132818,1457.47874609421,996.416738128113,1258.05089179498,1874.07978412441,900.659276300855,1845.92516849591,3317.02727543385,8579.6541189573,6110.92369446118,3415.81133232177,3233.43118231289,3374.39447471901,3909.6351248235,4473.8014860711,5470.50855574498,7585.34704878902,5542.94332123659,4092.99387531239,4397.53490152556,4804.11007070224,7269.65137719534,5483.85460142074,4877.16892327271,3597.05174157519,2708.48948843884,3082.55657065875,2550.12192727902,2489.57412528364,2004.06091754596,2250.14570049245,1550.20177408178,1928.10137661992,1613.54131544146,1125.6306250499,2733.42336694677,2599.09959238188,2713.18624803564,2772.48927901667,2984.56735193616,2797.31960767068,2969.88722690472,2219.79338977701,2938.63080535204,2745.97274467247,3120.4018462004,2357.44462038051,2169.90514044364,2278.16775431476,1423.6908315433,4118.88762157428,3200.50994480349,3470.33917333294,3342.95971925656,3316.8772790614,4066.38190565752,4207.18330901941,3764.71346812051,3611.73642176105,4174.38793518976,3654.54384286095,3271.20335167028,4212.30476265479,3200.36042111594,7954.24022779661,19729.6347748399,2073.76993932128,2117.26265439621,1397.75343643372,1391.53714322264,5514.44369258061,1056.5908303503,4181.43043192365,4138.26025080007,3099.94269337498,3331.22504345858,3376.2911070446,4192.6464975134,4009.24518938815,3746.42784256511,3365.4801414367,1203.66965131609,2455.27959393263,3154.43216896543,2886.03114582666,3059.37093052567,1072.5807177869,2715.50141539347,2416.16986726229,1929.24136082308,2607.8110160301,2117.30586388983,2863.64391659706,2143.39486899937,2026.68759611714,1592.19318648064,1374.65865581798,1362.42052630855,1112.21619199763,2429.56434176447,2743.30960698087,2585.97632765616,2085.52114763314,2637.89644351702,2102.4428362333,2770.02210704462,3514.20882825406,2997.42380272306,1468.49860264799,2456.64028257511,2165.39942641879,2690.37864227025,3149.63929652276,2959.95284510269,6637.31013089833,1703.68767487256,3923.0245522379,4619.97003935674,4327.44052104805,3431.50818125446,3220.65269933507,4420.45186269643,3661.33538206764,3743.84130111018,3697.40209916355,2298.84684818039,3471.47119355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|short_description=p1@Actb
}}
}}

Latest revision as of 16:46, 25 September 2015

Short description:p1@Actb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Actb_5end
Coexpression cluster:MCL_coexpression_mm9:462
Association with transcript: 0bp_to_ENSMUST00000031564, ENSMUST00000163829, ENSMUST00000167386, NM_007393, uc009ajk.1_5end
EntrezGene:Actb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Actb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71785.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516152.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613946.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I35313.99
CD326+ enterocyte, pool2.CNhs13197.11849-124I47394.22
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74381.98
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84419.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97580.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74396.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25035.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64158.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13920.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47212.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88379.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13237.49
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33172.38
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52539.41
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26692.69
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46185.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65425.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31798.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23492.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92990.48
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17920.10
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28309.89
GP2+ M cell, pool1.CNhs13228.11845-124H913145.32
GP2+ M cell, pool2.CNhs13231.11846-124I19722.30
GP2+ M cell, pool3.CNhs13240.11847-124I28858.88
Ileum epithelium, pool1.CNhs13199.10252-104B910261.07
Ileum epithelium, pool2.CNhs13232.10253-104C18768.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87462.78
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33338.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62415.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E91553.12
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51375.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61539.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71523.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823313.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118256.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316454.87
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G925080.43
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223459.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420063.23
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85252.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95199.83
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35413.53
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710369.03
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27115.69
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811741.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36238.48
Mouse Astrocytes, donor2.CNhs12078.11552-120C43945.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C49862.86
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24155.98
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95559.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15669.57
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112461.39
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18090.27
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58449.80
Mouse Granule cells, donor1.CNhs12131.11713-123C35124.88
Mouse Granule cells, donor2.CNhs12357.11731-123E36031.03
Mouse Granule cells, donor3.CNhs12108.11636-122C75279.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613392.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111286.04
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715288.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714862.66
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216275.68
Mouse Microglia, donor1.CNhs12629.11718-123C812664.70
Mouse Microglia, donor2.CNhs12634.11736-123E813266.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55135.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55806.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95100.38
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13829.44
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54046.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24802.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23856.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65157.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31004.26
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31756.59
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71846.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45091.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43996.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84617.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41967.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51520.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61705.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63245.04
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63310.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13808.89
Mouse Schwann, donor1.CNhs12507.11728-123D94509.57
Mouse Schwann, donor2.CNhs12573.11746-123F94627.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33389.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72821.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C48273.89
Mouse hepatocyte, donor3.CNhs12615.11637-122C82199.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F42369.08
Mouse hepatocyte, donor8.CNhs13091.11824-124F61450.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72401.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76541.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36122.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85304.33
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61932.09
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15275.50
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I83215.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B62659.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16406.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26901.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36728.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62616.07
accessory axillary lymph node, adult.CNhs10475.1063-29H94670.98
adrenal gland, adult.CNhs10508.49-24D72061.12
adrenal gland, embryo E14.CNhs11038.406-44C53067.39
adrenal gland, embryo E16.CNhs11004.1254-43D62791.34
adrenal gland, embryo E17.CNhs11043.1263-45I12920.51
adrenal gland, embryo E18.CNhs11026.1262-18F52307.71
adrenal gland, neonate N00.CNhs11191.1311-23C11861.43
adrenal gland, neonate N25.CNhs11223.1377-27I31951.98
amnion, adult pregnant day17.5.CNhs10488.583-22A85162.17
aorta, adult.CNhs10498.46-23H12407.58
bone (os femoris), adult.CNhs10483.56-12G28857.61
bone (os femoris), neonate N02.CNhs11227.1985-43F52555.59
bone (os femoris), neonate N16.CNhs11225.1525-43A62435.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32537.35
cecum, adult.CNhs10467.37-13H45416.54
cerebellum, adult.CNhs10494.15-8B2927.82
cerebellum, neonate N30.CNhs11135.1395-42I21157.61
colon, adult.CNhs10468.36-18H76786.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73631.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11632.34
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43468.00
corpora quadrigemina, adult.CNhs10501.16-22A41162.67
corpus striatum, adult.CNhs10487.19-21D81627.79
corpus striatum, neonate N00.CNhs11226.630-43F13702.41
cortex, adult.CNhs10473.12-14D51575.02
cortex, neonate N30.CNhs11107.1392-42F21554.75
diencephalon, adult.CNhs10482.20-12F21394.67
diencephalon, neonate N30.CNhs11201.1388-42B21418.15
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13244.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22853.65
epididymis, adult.CNhs10490.58-23B21454.17
eyeball, adult.CNhs10484.31-12G41341.36
eyeball, embryo E12.CNhs11016.345-16C62695.97
eyeball, embryo E14.CNhs10521.399-16E22642.72
eyeball, embryo E15.CNhs10593.426-16C92748.83
eyeball, embryo E17.CNhs11023.1261-18D42191.25
eyeball, neonate N00.CNhs11207.633-15C61696.69
eyeball, neonate N01.CNhs11140.1532-43E72034.96
eyeball, neonate N02.CNhs11205.1551-44G82063.87
eyeball, neonate N16.CNhs11188.777-19A21228.32
forelimb, embryo E11.CNhs10596.335-25E24063.24
forelimb, embryo E12.CNhs10600.359-14H23057.28
forelimb, embryo E13.CNhs10589.384-1E23060.85
forelimb, embryo E14.CNhs10577.413-26A82941.83
forelimb, embryo E15.CNhs11007.437-20E72544.41
forelimb, embryo E17.CNhs10598.1517-43C42900.94
forelimb, embryo E18.CNhs11008.1520-43B52720.44
gonad, embryo E13.CNhs11044.1564-45I62246.70
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81710.59
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21950.44
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53987.67
heart, embryo E11.CNhs10586.331-24E92098.81
heart, embryo E12.CNhs11015.353-12F51919.60
heart, embryo E13.CNhs11013.376-3I91730.22
heart, embryo E14.CNhs10597.403-26D41823.41
heart, embryo E15.CNhs11017.431-16C81370.46
heart, embryo E16.CNhs11021.457-17C61457.52
heart, embryo E17.CNhs11025.479-18E51214.29
heart, embryo E18.CNhs11030.1283-20G31467.46
heart, neonate N00.CNhs11213.639-21E3999.04
heart, neonate N03.CNhs11221.1349-25I21182.69
heart, neonate N10.CNhs11118.749-24G11457.48
heart, neonate N16.CNhs11209.782-15G1996.42
heart, neonate N20.CNhs11127.821-26I61258.05
heart, neonate N25.CNhs11196.1351-25D31874.08
heart, neonate N30.CNhs11202.1390-42D2900.66
hippocampus, adult.CNhs10478.13-16E81845.93
hippocampus, neonate N00.CNhs11228.627-43G13317.03
intestinal mucosa, adult.CNhs10506.860-29I38579.65
intestine, adult.CNhs10496.178-9A36110.92
intestine, embryo E12.CNhs11019.1251-16I53415.81
intestine, embryo E13.CNhs11010.381-16D53233.43
intestine, embryo E15.CNhs10602.976-16D83374.39
intestine, embryo E16.CNhs10585.463-22H43909.64
intestine, embryo E17.CNhs10582.482-18D34473.80
intestine, embryo E18.CNhs10526.1289-20F75470.51
intestine, neonate N00.CNhs11126.644-26D17585.35
intestine, neonate N01.CNhs11192.1322-23E95542.94
intestine, neonate N06.CNhs11102.688-20B84092.99
intestine, neonate N07.CNhs11095.720-20F24397.53
intestine, neonate N10.CNhs11098.755-23A54804.11
intestine, neonate N20.CNhs11187.827-18D17269.65
intestine, neonate N25.CNhs11121.1352-25E35483.85
intestine, neonate N30.CNhs11131.1384-42G14877.17
kidney, embryo E14.CNhs10606.411-4I93597.05
kidney, embryo E15.CNhs10997.434-16F82708.49
kidney, embryo E16.CNhs10584.464-22A53082.56
kidney, embryo E17.CNhs11028.483-18I22550.12
kidney, embryo E18.CNhs11001.1288-20C72489.57
kidney, neonate N00.CNhs11214.646-21G72004.06
kidney, neonate N10.CNhs11206.758-6D52250.15
kidney, neonate N20.CNhs11113.832-19I11550.20
kidney, neonate N25.CNhs11122.1353-25F31928.10
kidney, neonate N30.CNhs11203.1385-42H11613.54
liver, adult pregnant day01.CNhs10466.508-5B21125.63
liver, embryo E12.CNhs10601.355-15F82733.42
liver, embryo E13.CNhs10524.378-3H62599.10
liver, embryo E14.CNhs10594.409-16E12713.19
liver, embryo E15.CNhs10520.433-16D72772.49
liver, embryo E16.CNhs10523.462-17F52984.57
liver, embryo E17.CNhs10510.481-18A32797.32
liver, embryo E18.CNhs10579.499-43G42969.89
liver, neonate N00.CNhs11117.641-24F42219.79
liver, neonate N03.CNhs11123.1345-25G22938.63
liver, neonate N06.CNhs11101.684-20A82745.97
liver, neonate N07.CNhs11103.716-20H23120.40
liver, neonate N10.CNhs11115.751-24B92357.44
liver, neonate N20.CNhs11220.823-25A32169.91
liver, neonate N25.CNhs11198.1368-26H12278.17
liver, neonate N30.CNhs11106.1382-42D11423.69
lung, adult.CNhs10474.28-22B14118.89
lung, embryo E12.CNhs10522.354-16G23200.51
lung, embryo E14.CNhs10604.404-26F83470.34
lung, embryo E15.CNhs11020.432-17C53342.96
lung, embryo E16.CNhs10998.458-17B63316.88
lung, embryo E17.CNhs10605.480-44A64066.38
lung, embryo E18.CNhs10583.1287-20I64207.18
lung, neonate N00.CNhs11224.640-42C63764.71
lung, neonate N06.CNhs11212.683-20E53611.74
lung, neonate N07.CNhs11111.715-19A34174.39
lung, neonate N10.CNhs11219.750-23E63654.54
lung, neonate N20.CNhs11109.822-18A43271.20
lung, neonate N25.CNhs11119.1359-25C74212.30
lung, neonate N30.CNhs11133.1394-42H23200.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17954.24
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A119729.63
mammary gland, adult lactating day02.CNhs10480.595-22B62073.77
mammary gland, adult pregnant day19.CNhs10476.588-5H22117.26
medulla oblongata, adult.CNhs10477.17-12C21397.75
medulla oblongata, neonate N30.CNhs11200.1396-42A31391.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75514.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21056.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14181.43
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24138.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33099.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73331.23
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83376.29
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94192.65
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44009.25
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53746.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63365.48
olfactory brain, adult.CNhs10489.18-22I91203.67
ovary, adult.CNhs10507.91-2I72455.28
ovary, embryo E18.CNhs11040.505-44H73154.43
ovary, neonate N00.CNhs11217.1299-22I42886.03
oviduct, adult pregnant day01.CNhs10500.988-6G63059.37
pancreas, adult.CNhs10486.34-16E41072.58
pancreas, embryo E14.CNhs11012.405-44F42715.50
pancreas, embryo E15.CNhs11042.1556-45F22416.17
pancreas, embryo E16.CNhs11003.460-26E51929.24
pancreas, embryo E17.CNhs10599.1558-45G32607.81
pancreas, embryo E18.CNhs10580.1535-43I72117.31
pancreas, neonate N00.CNhs11105.645-26G92863.64
pancreas, neonate N01.CNhs11138.1531-43D72143.39
pancreas, neonate N02.CNhs11139.1539-43D82026.69
pancreas, neonate N16.CNhs11136.787-43B61592.19
pancreas, neonate N25.CNhs11094.1555-45E21374.66
pancreas, neonate N30.CNhs11182.1548-44H51362.42
pituitary gland, adult.CNhs10493.21-1G81112.22
pituitary gland, embryo E12.CNhs11018.346-16E62429.56
pituitary gland, embryo E13.CNhs11009.370-44C72743.31
pituitary gland, embryo E14.CNhs11037.398-44A52585.98
pituitary gland, embryo E15.CNhs10592.427-16B92085.52
pituitary gland, embryo E16.CNhs11036.449-43F62637.90
pituitary gland, embryo E17.CNhs11039.1265-44F52102.44
pituitary gland, neonate N00.CNhs11190.1308-22E92770.02
placenta, adult pregnant day10.CNhs10472.539-13I73514.21
placenta, adult pregnant day17.CNhs10464.577-18G32997.42
prostate, adult.CNhs10470.859-1F81468.50
skin, adult.CNhs10492.30-1C32456.64
skin, neonate N00.CNhs11124.650-25G42165.40
skin, neonate N03.CNhs11215.662-22H32690.38
skin, neonate N06.CNhs11097.693-20I53149.64
skin, neonate N10.CNhs11108.762-6C42959.95
small intestine, neonate N16.CNhs11114.790-21I16637.31
spinal cord, adult.CNhs10505.24-13C91703.69
spleen, adult.CNhs10465.25-2G23923.02
spleen, embryo E16.CNhs11035.461-43C14619.97
spleen, embryo E18.CNhs11011.1271-21F24327.44
spleen, neonate N10.CNhs11116.752-24D13431.51
spleen, neonate N20.CNhs11112.824-19H13220.65
spleen, neonate N25.CNhs11099.1354-25G34420.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63661.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93743.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33697.40
stomach, adult.CNhs10503.33-1H62298.85
stomach, embryo E12.CNhs10588.356-43E33471.47
stomach, embryo E15.CNhs10603.1252-16G83185.41
stomach, embryo E16.CNhs11022.459-17D43364.26
stomach, embryo E17.CNhs11006.1035-18D53626.85
stomach, embryo E18.CNhs10999.1286-20C63919.17
stomach, neonate N03.CNhs11193.1340-24B84584.58
stomach, neonate N07.CNhs11210.718-18A94382.53
stomach, neonate N25.CNhs11104.1355-25E44582.30
stomach, neonate N30.CNhs11134.1386-42I14531.08
submandibular gland, adult.CNhs10469.59-29C11436.54
testis, adult.CNhs10504.57-7G51002.25
testis, embryo E13.CNhs11031.389-23F52433.23
testis, embryo E15.CNhs11034.443-27C52356.79
testis, embryo E16.CNhs11033.470-26G52260.30
testis, embryo E17.CNhs11029.486-18I52927.28
testis, embryo E18.CNhs11027.503-18G52259.45
testis, neonate N00.CNhs11189.1300-22B71940.03
testis, neonate N07.CNhs11222.726-26I41721.17
testis, neonate N10.CNhs11204.763-44D91335.17
testis, neonate N20.CNhs11110.839-18H3658.08
testis, neonate N30.CNhs11130.1391-42E2678.02
thymus, adult.CNhs10471.38-12B53427.14
thymus, embryo E14.CNhs11041.402-44I44147.15
thymus, embryo E15.CNhs11005.430-45I23595.50
thymus, embryo E16.CNhs11002.456-26C53482.92
thymus, embryo E17.CNhs10581.478-18C13394.70
thymus, embryo E18.CNhs10595.1273-19G43791.83
thymus, neonate N02.CNhs11181.1541-43F83996.14
thymus, neonate N03.CNhs11137.2104-43C74079.18
thymus, neonate N06.CNhs11197.681-26C43304.53
thymus, neonate N07.CNhs11211.713-19D33526.01
thymus, neonate N10.CNhs11194.748-24E43881.10
thymus, neonate N20.CNhs11186.820-7A24610.83
thymus, neonate N25.CNhs11125.1362-25G74062.26
thymus, neonate N30.CNhs11132.1393-42G23544.06
tongue, adult.CNhs10499.32-1B41519.55
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33535.35
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74644.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55205.93
urinary bladder, adult.CNhs10481.879-12E45067.17
uterus, adult pregnant day19.CNhs10497.590-15F55076.25
uterus, adult.CNhs10509.92-27E53511.57
vagina, adult.CNhs10502.89-27D52934.06
vesicular gland, adult.CNhs10491.51-27F81969.17
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12013.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22250.99
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32258.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72816.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41709.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51711.72
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61748.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71687.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81653.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91606.61
whole body, embryo E11.CNhs11014.324-5I83789.28
whole body, embryo E12.CNhs10587.857-27C92531.81
whole body, embryo E13.CNhs10512.372-23H22914.93
whole body, embryo E14.5.CNhs10578.420-27D22504.73
whole body, embryo E14.CNhs10519.395-14B12964.98
whole body, embryo E16.CNhs10514.453-14F22989.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52189.57
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52302.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52232.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52368.28
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52410.33
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52540.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52607.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52645.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52723.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52356.22
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52293.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52409.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52164.69
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52573.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52215.28
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52313.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52472.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52244.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52553.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52400.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52469.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52343.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52618.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51970.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52335.92
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52356.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52619.90
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52585.59
whole body, embryo E17.5.CNhs10513.490-9F92623.34
whole body, embryo E17.CNhs10517.475-3I53800.37
whole body, embryo E18.CNhs10516.493-3B32786.36
whole body, neonate N00.CNhs10525.657-19C22543.86
whole body, neonate N01.CNhs10576.659-23C61988.25
whole body, neonate N06.CNhs10515.692-21D12681.51
whole body, neonate N10.CNhs10518.761-6B42436.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
stem cell6.93e-1097
somatic stem cell6.01e-0991
multi fate stem cell6.01e-0991
motile cell9.10e-0954
embryonic cell3.76e-0770

Uber anatomy
Ontology termp-valuen
endoderm-derived structure3.13e-09118
endoderm3.13e-09118
presumptive endoderm3.13e-09118
digestive system3.57e-09116
digestive tract3.57e-09116
primitive gut3.57e-09116
hemolymphoid system1.50e-0848
immune system1.50e-0848
gastrointestinal system1.54e-0847
subdivision of digestive tract1.97e-08114
hematopoietic system1.88e-0745
blood island1.88e-0745
intestine2.46e-0731
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