FFCP PHASE1:Mm9::chr2:13501038..13501141,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22352 | |EntrezGene=22352 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=501 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_ENSMUST00000148248_5end | |association_with_transcript=27bp_to_ENSMUST00000148248_5end | ||
|cluster_id=chr2:13501038..13501141,+ | |||
|description=CAGE_peak_2_at_Vim_5end | |description=CAGE_peak_2_at_Vim_5end | ||
|id=chr2:13501038..13501141,+ | |id=chr2:13501038..13501141,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.28e-08!50;CL:0000333!7.98e-08!10;CL:0000095!7.98e-08!10;CL:0000243!7.98e-08!10;CL:0000123!7.98e-08!10;CL:0000125!7.98e-08!10;CL:0000030!7.98e-08!10;CL:0000339!7.98e-08!10 | |ontology_enrichment_celltype=CL:0000055!1.28e-08!50;CL:0000333!7.98e-08!10;CL:0000095!7.98e-08!10;CL:0000243!7.98e-08!10;CL:0000123!7.98e-08!10;CL:0000125!7.98e-08!10;CL:0000030!7.98e-08!10;CL:0000339!7.98e-08!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.50e-08,10;CL:0000095,1.50e-08,10;CL:0000243,1.50e-08,10;CL:0000123,1.50e-08,10;CL:0000125,1.50e-08,10;CL:0000030,1.50e-08,10;CL:0000339,1.50e-08,10;CL:0002453,3.45e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.92e-07,11 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0.774739940649458,0.281577444303333,0.234064526321993,0,0,0.171200729931206,1.04904482902797,0,0.202475267389826,0,0.315462165358238,0.685572168028694,0.42438965179803,0.765389611359628,1.88652807281682,2.61199789138935,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,4.60384793810598,2.3440060335714,6.80580867165938,2.94115744015507,2.04913645487534,3.88408282424923,3.52511090331616,3.24406179902447,4.22157529971868,7.04152209913235,16.5699118849139,21.7489320907127,42.3857179981938,26.3174472655682,37.3756667348926,0.503347818173209,1.45072428402269,1.00828139742739,19.0371982666601,14.3266719969378,10.8291139378263,1.41621522601718,2.64495489636016,0.633831403506179,8.4711133017283,6.22506357277798,4.94944844504769,5.93319817540185,4.9733608046227,9.88680364710736,15.7529505181837,2.07379224616955,3.24014251996058,1.47227472945967,0.856952953211411,2.20868540951614,0.367472397644862,2.68367318851062,2.75765635983006,0,0.510749352340751,0,0.923204014111357,1.73826522844578,1.56274011167028,0.837548997004143,0,0.30559649555362,3.24091444021034,2.70506193518296,0.745597783301202,15.9782267933018,13.9807386197553,0.869593466105033,0.860423876981386,0,0,0,0,0.280888840263504,30.3365974188943,30.3949625385356,26.8538076627859,1.54927761754349,19.2489716121477,7.64415719119937,14.2213340630666,0,0,0,0.5709193985953,0.517875767294343,0.29688427812965,2.60227990149204,0.913396434936424,0.922461989024234,0.452167921657868,1.88141931417128,0.376999773989026,1.97755974187499,3.18118585223806,0.884610551949874,2.26473589926373,1.10420759230197,1.45462575940567,0,0.585561594023094,0.209446706813455,1.02182822083437,5.63131085177825,4.79922184794726,3.04968544975355,0,0,0.251308704225729,0,0.255715457330331,0,0.324482526135515,3.36069900706044,0.746441823660558,0.252722758433675,0.841767423545896,1.95180664444056,1.83921683546778,1.98068342785884,4.21973489940002,1.15662048557257,1.15302348256365,1.40552586839593,0.776110112217047,0.431135985865684,0.945530400839096,0.879755620819744,1.97276159184817,3.05851974148158,1.74126083261083,3.70407845534298,1.79130840136644,4.91549231119264,2.31613116403244,7.38825098428541,2.27838349789052,2.34526059981096,4.50155153652537,2.3674473558521,2.95146347621106,4.31947916084659,3.0229412817553,4.02410102099429,2.33530684734339,3.12663714835613,2.13417703302824,0.56748166682099,0.877199924551994,1.75640092232841,0.671032093801859,0,0.823236899034275,0,0.264450566663544,0.853153002140936,3.71578674976702,0.644337306610467,1.00841762311671,0.667134131534611,0.570676878337677,0.949058123089023,0.988193728344065,1.75934646160189,0.795825888164603,0.974820435595601,0,0.648414149624083,0.199141273254367,0.758671603812327,2.05647322697512,0,1.62921062276251,0.969762435838129,1.33258057791605,0.632365371242573,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.393117990226406,0,0.405720242777006,0.482354319504834,0.763877555344259,0.575392274901621,0.324270453550071,0,14.3768206527355,0,0.624075346229121,0.505157755894224,0.538192240565737,0,2.03228509183265,0.947457058852424,1.62964976442026,2.03694102930226,3.28566347603903,1.84256883185997,3.33261097240419,2.34160377429359,4.09851374676097,3.76489972402917,1.91345722388985,3.27726629431476,2.59027472798843,2.02508682014116,19.6028669121054,13.5976420954677,0,0.551873492609465,0.160550589987792,0.117211686592203,6.55739781506702,1.26235463602186,3.78609863299508,5.46614242015294,3.23135096599198,7.16906393857656,6.46116154838943,2.54768877709949,3.64329631507405,5.26060544240361,3.55759000151871,0,0.567760340833074,1.78065603667255,1.46598263418218,0.329940245945071,0,1.45668381692989,1.51161778482376,1.13163047853539,0.590603785761546,1.84461088766356,2.32585463851399,2.18120237686503,2.13898427030833,0.948110273807448,0,2.06271086496374,0,2.34079422240703,1.55230420539305,2.7863814554107,0.886701168211368,1.78368817602071,2.30368628842969,2.43571959291679,0.938686832254841,0.847328283455281,0.220528398054962,2.30840754118072,3.39075296061402,1.38719727334758,1.43246812803764,0.984845398470368,1.1659233465194,0.370850604021019,1.02522528478712,2.06386867963222,0.740778109478847,1.50694765603753,0.27338845544205,0.228778173206523,1.86976272993241,1.81936888020755,2.48759952847963,0,0.316335993581135,0.813277868507395,1.83609079397062,1.88179466413022,1.74690050996942,1.61837215661785,0.578574190077352,0.523511883968059,0.518459893167171,0,1.69107881605257,0.747582730219894,0.66183396182839,0.777804753376191,4.00395452780966,1.85851738039856,3.52071715937262,1.17183946359555,0.734015410979976,0,1.15212002503146,0,1.01362607645082,1.33524244314275,0.25984164595559,0.537080087002444,0.198681354781265,1.20195449519969,0.443068581523732,0.403865799792591,0.304827226619999,0.907435666231565,0.779663045918019,0.288635524920988,0.233753804363138,0.453460767230423,0,0.986852422704233,0.335769232728157,0.965947970160952,1.68914227906064,0.36630324853453,0.643105137237198,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,3.42498247027783,0.399024873401031,1.53660245178721,1.94485373654635,1.04806581313991,2.20612210140017,3.33370091702423,2.06035057238894,0.962757628775446,2.52697211763797,2.5347929989024,1.69763707247469,1.87283014939765,1.34452820050225,1.32101578597911,0.476293691283074,1.39061191133827,2.12200142510076,2.06042950401653,3.38557516309114,2.74295401908332,3.72699192934609,2.38436189947321,1.16277133305863,2.07040636913727,1.18460451048347,1.82927972872773,4.20911538300549,2.71608227691724,2.24456908663095,2.13543032623513,1.47756723563345,2.86461730218783,1.39443157067369,2.12197272079256,2.74791635731741,1.87145286756327,1.07435527024149,2.86932498103265,3.08827986767322,1.85494268496337 | |phase1_expression=1.28119077683835,0,0,0,0,0,0,0.774739940649458,0.281577444303333,0.234064526321993,0,0,0.171200729931206,1.04904482902797,0,0.202475267389826,0,0.315462165358238,0.685572168028694,0.42438965179803,0.765389611359628,1.88652807281682,2.61199789138935,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,4.60384793810598,2.3440060335714,6.80580867165938,2.94115744015507,2.04913645487534,3.88408282424923,3.52511090331616,3.24406179902447,4.22157529971868,7.04152209913235,16.5699118849139,21.7489320907127,42.3857179981938,26.3174472655682,37.3756667348926,0.503347818173209,1.45072428402269,1.00828139742739,19.0371982666601,14.3266719969378,10.8291139378263,1.41621522601718,2.64495489636016,0.633831403506179,8.4711133017283,6.22506357277798,4.94944844504769,5.93319817540185,4.9733608046227,9.88680364710736,15.7529505181837,2.07379224616955,3.24014251996058,1.47227472945967,0.856952953211411,2.20868540951614,0.367472397644862,2.68367318851062,2.75765635983006,0,0.510749352340751,0,0.923204014111357,1.73826522844578,1.56274011167028,0.837548997004143,0,0.30559649555362,3.24091444021034,2.70506193518296,0.745597783301202,15.9782267933018,13.9807386197553,0.869593466105033,0.860423876981386,0,0,0,0,0.280888840263504,30.3365974188943,30.3949625385356,26.8538076627859,1.54927761754349,19.2489716121477,7.64415719119937,14.2213340630666,0,0,0,0.5709193985953,0.517875767294343,0.29688427812965,2.60227990149204,0.913396434936424,0.922461989024234,0.452167921657868,1.88141931417128,0.376999773989026,1.97755974187499,3.18118585223806,0.884610551949874,2.26473589926373,1.10420759230197,1.45462575940567,0,0.585561594023094,0.209446706813455,1.02182822083437,5.63131085177825,4.79922184794726,3.04968544975355,0,0,0.251308704225729,0,0.255715457330331,0,0.324482526135515,3.36069900706044,0.746441823660558,0.252722758433675,0.841767423545896,1.95180664444056,1.83921683546778,1.98068342785884,4.21973489940002,1.15662048557257,1.15302348256365,1.40552586839593,0.776110112217047,0.431135985865684,0.945530400839096,0.879755620819744,1.97276159184817,3.05851974148158,1.74126083261083,3.70407845534298,1.79130840136644,4.91549231119264,2.31613116403244,7.38825098428541,2.27838349789052,2.34526059981096,4.50155153652537,2.3674473558521,2.95146347621106,4.31947916084659,3.0229412817553,4.02410102099429,2.33530684734339,3.12663714835613,2.13417703302824,0.56748166682099,0.877199924551994,1.75640092232841,0.671032093801859,0,0.823236899034275,0,0.264450566663544,0.853153002140936,3.71578674976702,0.644337306610467,1.00841762311671,0.667134131534611,0.570676878337677,0.949058123089023,0.988193728344065,1.75934646160189,0.795825888164603,0.974820435595601,0,0.648414149624083,0.199141273254367,0.758671603812327,2.05647322697512,0,1.62921062276251,0.969762435838129,1.33258057791605,0.632365371242573,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.393117990226406,0,0.405720242777006,0.482354319504834,0.763877555344259,0.575392274901621,0.324270453550071,0,14.3768206527355,0,0.624075346229121,0.505157755894224,0.538192240565737,0,2.03228509183265,0.947457058852424,1.62964976442026,2.03694102930226,3.28566347603903,1.84256883185997,3.33261097240419,2.34160377429359,4.09851374676097,3.76489972402917,1.91345722388985,3.27726629431476,2.59027472798843,2.02508682014116,19.6028669121054,13.5976420954677,0,0.551873492609465,0.160550589987792,0.117211686592203,6.55739781506702,1.26235463602186,3.78609863299508,5.46614242015294,3.23135096599198,7.16906393857656,6.46116154838943,2.54768877709949,3.64329631507405,5.26060544240361,3.55759000151871,0,0.567760340833074,1.78065603667255,1.46598263418218,0.329940245945071,0,1.45668381692989,1.51161778482376,1.13163047853539,0.590603785761546,1.84461088766356,2.32585463851399,2.18120237686503,2.13898427030833,0.948110273807448,0,2.06271086496374,0,2.34079422240703,1.55230420539305,2.7863814554107,0.886701168211368,1.78368817602071,2.30368628842969,2.43571959291679,0.938686832254841,0.847328283455281,0.220528398054962,2.30840754118072,3.39075296061402,1.38719727334758,1.43246812803764,0.984845398470368,1.1659233465194,0.370850604021019,1.02522528478712,2.06386867963222,0.740778109478847,1.50694765603753,0.27338845544205,0.228778173206523,1.86976272993241,1.81936888020755,2.48759952847963,0,0.316335993581135,0.813277868507395,1.83609079397062,1.88179466413022,1.74690050996942,1.61837215661785,0.578574190077352,0.523511883968059,0.518459893167171,0,1.69107881605257,0.747582730219894,0.66183396182839,0.777804753376191,4.00395452780966,1.85851738039856,3.52071715937262,1.17183946359555,0.734015410979976,0,1.15212002503146,0,1.01362607645082,1.33524244314275,0.25984164595559,0.537080087002444,0.198681354781265,1.20195449519969,0.443068581523732,0.403865799792591,0.304827226619999,0.907435666231565,0.779663045918019,0.288635524920988,0.233753804363138,0.453460767230423,0,0.986852422704233,0.335769232728157,0.965947970160952,1.68914227906064,0.36630324853453,0.643105137237198,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,3.42498247027783,0.399024873401031,1.53660245178721,1.94485373654635,1.04806581313991,2.20612210140017,3.33370091702423,2.06035057238894,0.962757628775446,2.52697211763797,2.5347929989024,1.69763707247469,1.87283014939765,1.34452820050225,1.32101578597911,0.476293691283074,1.39061191133827,2.12200142510076,2.06042950401653,3.38557516309114,2.74295401908332,3.72699192934609,2.38436189947321,1.16277133305863,2.07040636913727,1.18460451048347,1.82927972872773,4.20911538300549,2.71608227691724,2.24456908663095,2.13543032623513,1.47756723563345,2.86461730218783,1.39443157067369,2.12197272079256,2.74791635731741,1.87145286756327,1.07435527024149,2.86932498103265,3.08827986767322,1.85494268496337 | ||
|short_description=p2@Vim | |short_description=p2@Vim | ||
}} | }} |
Latest revision as of 19:17, 25 September 2015
Short description: | p2@Vim |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vim_5end |
Coexpression cluster: | MCL_coexpression_mm9:501 |
Association with transcript: | 27bp_to_ENSMUST00000148248_5end |
EntrezGene: | Vim |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.50e-08 | 10 |
neuron associated cell | 1.50e-08 | 10 |
glial cell (sensu Vertebrata) | 1.50e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.50e-08 | 10 |
glial cell | 1.50e-08 | 10 |
glioblast | 1.50e-08 | 10 |
glioblast (sensu Vertebrata) | 1.50e-08 | 10 |
oligodendrocyte precursor cell | 3.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 5.92e-07 | 11 |