FFCP PHASE1:Mm9::chr11:83476081..83476096,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:83476081..83476096,+ to FFCP PHASE1:Mm9::chr11:83476081..83476096,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20303 | |EntrezGene=20303 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1588 | |||
|TSSclassifier=NA | |||
|UniProt=P14097,Q5QNV9 | |UniProt=P14097,Q5QNV9 | ||
|association_with_transcript=0bp_to_ENSMUST00000019074,NM_013652,uc007kpp.1,uc011ybi.1_5end | |||
|cluster_id=chr11:83476081..83476096,+ | |||
|description=CAGE_peak_1_at_Ccl4_5end | |||
|id=chr11:83476081..83476096,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.62e-10!32;CL:0002032!1.62e-10!32;CL:0000037!1.62e-10!32;CL:0000566!1.62e-10!32;CL:0000837!1.62e-10!32;CL:0002031!1.17e-07!25;CL:0002320!2.13e-07!46;CL:0000134!2.13e-07!46;CL:0000049!3.94e-07!19;CL:0000738!5.94e-07!17;CL:0002087!5.94e-07!17;CL:0000219!7.54e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.26e-20,32;CL:0002032,4.26e-20,32;CL:0000037,4.26e-20,32;CL:0000837,4.26e-20,32;CL:0002320,3.92e-19,46;CL:0000134,3.92e-19,46;CL:0000219,2.60e-17,54;CL:0002031,1.05e-13,25;CL:0000049,1.60e-13,19;CL:0000738,4.31e-12,17;CL:0002087,4.31e-12,17;CL:0000034,9.19e-12,97;CL:0000723,2.86e-10,91;CL:0000048,2.86e-10,91;CL:0000557,3.92e-10,7;CL:0000763,8.30e-10,16;CL:0000838,1.61e-08,12;CL:0000542,1.10e-07,13;CL:0000051,1.10e-07,13;CL:0000084,1.70e-07,11;CL:0000827,1.70e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.05e-12!48;UBERON:0002390!4.82e-11!45;UBERON:0003061!4.82e-11!45;UBERON:0002371!2.92e-10!16;UBERON:0002405!9.28e-10!70;UBERON:0003081!8.29e-09!88;UBERON:0001474!2.76e-08!22;UBERON:0004765!2.76e-08!22;UBERON:0001434!2.76e-08!22;UBERON:0002204!6.48e-08!32;UBERON:0002384!2.13e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.92e-19,46;UBERON:0002371,7.56e-17,16;UBERON:0002204,6.08e-15,32;UBERON:0001474,9.72e-13,22;UBERON:0004765,9.72e-13,22;UBERON:0001434,9.72e-13,22;UBERON:0002193,6.77e-11,48;UBERON:0002405,6.77e-11,48;UBERON:0002390,4.22e-09,45;UBERON:0003061,4.22e-09,45 | |||
|phase1_expression=8.64803774365887,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0,0.774739940649458,352.112594101319,156.12103905677,298.604136585281,74.3476521836535,0.171200729931206,0,1.33243904726265,2.22722794128809,0.699561878128147,3.15462165358238,1.91960207048034,2.97072756258621,1.27564935226605,6.35462087685666,7.31359409589019,1.11994695955385,2.75291137280604,0.57423196411502,0.430761996159075,0.215471232685889,1.52018735565099,2.52030129759931,4.8780712344167,0,0,0,0,0.166234645358492,0,1.67412652294763,6.2506827561904,1.0470474879476,15.2940186888064,16.3930916390027,2.42755176515577,0,0,0,3.9119567217402,0.218025156380447,0,0,0.699932108126813,0,10.7380867876951,4.35217285206807,17.8129713545506,2.31533492432352,18.9112070359579,7.73508138416164,0,0.528990979272033,0.633831403506179,0,0,169.181146848903,221.506065215002,171.936187816956,99.4672366921104,26.1268447618657,0,0,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.854230084794618,0.186399445825301,1.21161909333094,0.302286240427142,6.08715426273523,8.60423876981386,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,0.5709193985953,1.8125651855302,2.9688427812965,0.173485326766136,0,0.461230994512117,0.150722640552623,0.23517741427141,0.502666365318702,0,0.578397427679647,0.884610551949874,0.161766849947409,0,0,1.86391761218122,0,0.41889341362691,1.78819938646014,256.524181567175,323.347572005447,183.997688801798,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0.497627882440372,0.252722758433675,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,0,0,0,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,123.589520967129,99.8509879605095,73.5983463434585,0.828503090142008,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,2.19550115291051,0.402619256281115,0.630869845692382,0.102904612379284,6.27795687669216,0.264450566663544,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0.754005626400808,0,0.38992817423824,0,1.08069024937347,0.199141273254367,1.70701110857774,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0.405720242777006,0.72353147925725,0.25462585178142,0.863088412352432,0,1.64736847912849,1.43768206527355,1.86070473834252,0.312037673114561,0,0,0.482443521363367,1.84753190166605,0.37898282354097,1.14075483509418,0,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0.655453258862952,0.345369963731791,0.723245292907558,42.2215595029962,109.325042447561,1.96705709207614,0.275936746304732,0.160550589987792,0.468846746368813,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0,0.162886959353576,1.48473110675282,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0,0.356737635204141,0,0,2.11204537257339,0.21183207086382,0.661585194164886,0.32977250588296,0,0.0603129249281559,0,0,0,0,2.05045056957423,0.412773735926445,0.740778109478847,0,0.410082683163076,0.686334519619568,121.024642155625,157.025529507144,93.8377822132038,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.129614973291793,1.24267862617385,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0,0.948033361884535,0.608175645870493,1.23253148597793,1.16928740680016,0.179026695667481,0.993406773906324,0.360586348559907,0.443068581523732,0.302899349844443,0.533447646584999,0.604957110821043,0.779663045918019,0.577271049841977,0.584384510907845,0,0,0.0897138566094757,0,0.19318959403219,1.87682475451182,1.28206136987086,3.42989406526505,1.00314420807073,0,0,0,6.18671456437275,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0,0,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0,0,0.220591419119515,0 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|phase1_expression=8.64803774365887,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0,0.774739940649458,352.112594101319,156.12103905677,298.604136585281,74.3476521836535,0.171200729931206,0,1.33243904726265,2.22722794128809,0.699561878128147,3.15462165358238,1.91960207048034,2.97072756258621,1.27564935226605,6.35462087685666,7.31359409589019,1.11994695955385,2.75291137280604,0.57423196411502,0.430761996159075,0.215471232685889,1.52018735565099,2.52030129759931,4.8780712344167,0,0,0,0,0.166234645358492,0,1.67412652294763,6.2506827561904,1.0470474879476,15.2940186888064,16.3930916390027,2.42755176515577,0,0,0,3.9119567217402,0.218025156380447,0,0,0.699932108126813,0,10.7380867876951,4.35217285206807,17.8129713545506,2.31533492432352,18.9112070359579,7.73508138416164,0,0.528990979272033,0.633831403506179,0,0,169.181146848903,221.506065215002,171.936187816956,99.4672366921104,26.1268447618657,0,0,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.854230084794618,0.186399445825301,1.21161909333094,0.302286240427142,6.08715426273523,8.60423876981386,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,0.5709193985953,1.8125651855302,2.9688427812965,0.173485326766136,0,0.461230994512117,0.150722640552623,0.23517741427141,0.502666365318702,0,0.578397427679647,0.884610551949874,0.161766849947409,0,0,1.86391761218122,0,0.41889341362691,1.78819938646014,256.524181567175,323.347572005447,183.997688801798,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0.497627882440372,0.252722758433675,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,0,0,0,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,123.589520967129,99.8509879605095,73.5983463434585,0.828503090142008,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,2.19550115291051,0.402619256281115,0.630869845692382,0.102904612379284,6.27795687669216,0.264450566663544,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0.754005626400808,0,0.38992817423824,0,1.08069024937347,0.199141273254367,1.70701110857774,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0.405720242777006,0.72353147925725,0.25462585178142,0.863088412352432,0,1.64736847912849,1.43768206527355,1.86070473834252,0.312037673114561,0,0,0.482443521363367,1.84753190166605,0.37898282354097,1.14075483509418,0,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0.655453258862952,0.345369963731791,0.723245292907558,42.2215595029962,109.325042447561,1.96705709207614,0.275936746304732,0.160550589987792,0.468846746368813,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0,0.162886959353576,1.48473110675282,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0,0.356737635204141,0,0,2.11204537257339,0.21183207086382,0.661585194164886,0.32977250588296,0,0.0603129249281559,0,0,0,0,2.05045056957423,0.412773735926445,0.740778109478847,0,0.410082683163076,0.686334519619568,121.024642155625,157.025529507144,93.8377822132038,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.129614973291793,1.24267862617385,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0,0.948033361884535,0.608175645870493,1.23253148597793,1.16928740680016,0.179026695667481,0.993406773906324,0.360586348559907,0.443068581523732,0.302899349844443,0.533447646584999,0.604957110821043,0.779663045918019,0.577271049841977,0.584384510907845,0,0,0.0897138566094757,0,0.19318959403219,1.87682475451182,1.28206136987086,3.42989406526505,1.00314420807073,0,0,0,6.18671456437275,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0,0,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0,0,0.220591419119515,0 | ||
|short_description=p1@Ccl4 | |||
}} | }} |
Latest revision as of 20:25, 25 September 2015
Short description: | p1@Ccl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1588 |
Association with transcript: | 0bp_to_ENSMUST00000019074, NM_013652, uc007kpp.1, uc011ybi.1_5end |
EntrezGene: | Ccl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.26e-20 | 32 |
hematopoietic oligopotent progenitor cell | 4.26e-20 | 32 |
hematopoietic stem cell | 4.26e-20 | 32 |
hematopoietic multipotent progenitor cell | 4.26e-20 | 32 |
connective tissue cell | 3.92e-19 | 46 |
mesenchymal cell | 3.92e-19 | 46 |
motile cell | 2.60e-17 | 54 |
hematopoietic lineage restricted progenitor cell | 1.05e-13 | 25 |
common myeloid progenitor | 1.60e-13 | 19 |
leukocyte | 4.31e-12 | 17 |
nongranular leukocyte | 4.31e-12 | 17 |
stem cell | 9.19e-12 | 97 |
somatic stem cell | 2.86e-10 | 91 |
multi fate stem cell | 2.86e-10 | 91 |
granulocyte monocyte progenitor cell | 3.92e-10 | 7 |
myeloid cell | 8.30e-10 | 16 |
lymphoid lineage restricted progenitor cell | 1.61e-08 | 12 |
lymphocyte | 1.10e-07 | 13 |
common lymphoid progenitor | 1.10e-07 | 13 |
T cell | 1.70e-07 | 11 |
pro-T cell | 1.70e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.92e-19 | 46 |
bone marrow | 7.56e-17 | 16 |
musculoskeletal system | 6.08e-15 | 32 |
bone element | 9.72e-13 | 22 |
skeletal element | 9.72e-13 | 22 |
skeletal system | 9.72e-13 | 22 |
hemolymphoid system | 6.77e-11 | 48 |
immune system | 6.77e-11 | 48 |
hematopoietic system | 4.22e-09 | 45 |
blood island | 4.22e-09 | 45 |