Personal tools

FFCP PHASE1:Mm9::chr5:24107779..24107825,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66993
|EntrezGene=66993
|HGNC=
|HGNC=
|MCL_coexpression_id=19
|TSSclassifier=NA
|UniProt=Q6P9Z1
|UniProt=Q6P9Z1
|association_with_transcript=0bp_to_ENSMUST00000144995,NM_025891,uc008wsd.1_5end
|association_with_transcript=0bp_to_ENSMUST00000144995,NM_025891,uc008wsd.1_5end
|cluster_id=chr5:24107779..24107825,-
|description=CAGE_peak_1_at_Smarcd3_5end
|description=CAGE_peak_1_at_Smarcd3_5end
|id=chr5:24107779..24107825,-
|id=chr5:24107779..24107825,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!5.65e-13!18;UBERON:0000948!5.65e-13!18;UBERON:0005498!5.65e-13!18;UBERON:0004140!5.65e-13!18;UBERON:0009881!5.65e-13!18;UBERON:0004141!5.65e-13!18;UBERON:0003084!5.65e-13!18;UBERON:0007005!5.65e-13!18;UBERON:0004139!5.65e-13!18;UBERON:0004291!5.65e-13!18;UBERON:0004535!1.15e-12!23;UBERON:0001009!1.15e-12!23;UBERON:0003103!1.34e-08!43;UBERON:0000468!2.37e-08!333;UBERON:0004872!1.35e-07!33
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.28e-13,18;UBERON:0000948,4.28e-13,18;UBERON:0005498,4.28e-13,18;UBERON:0004140,4.28e-13,18;UBERON:0009881,4.28e-13,18;UBERON:0004141,4.28e-13,18;UBERON:0003084,4.28e-13,18;UBERON:0007005,4.28e-13,18;UBERON:0004139,4.28e-13,18;UBERON:0004291,4.28e-13,18;UBERON:0004535,8.74e-13,23;UBERON:0001009,8.74e-13,23;UBERON:0003103,1.77e-08,43;UBERON:0004872,4.40e-07,33
|phase1_expression=6.24580503708696,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,4.42225108785563,0,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.831173226792462,0.204169356262369,0,0,0,0,0,0,8.81277725829041,8.41428529121971,9.9115246167308,21.9069576417451,18.7501634487184,12.7417985985994,15.1655321277941,7.13930750289349,20.125359011096,0,0,0,20.5807548828758,30.9456115133857,27.3306208907044,3.64169629547276,4.23192783417626,5.07065122804943,7.79342423759004,5.33576877666684,0.899899717281399,0.988866362566974,2.8419204597844,10.4860038681442,10.373894243682,7.98410014775278,7.96535036156975,7.36137364729837,5.14171771926846,5.30084498283872,4.89963196859816,5.75072826109418,6.43453150627015,1.10115880999389,2.80912143787413,2.30409799884365,4.61602007055678,4.7573574673253,2.6045668527838,1.67509799400829,2.25105044012672,3.20876320331301,4.71405736757868,7.68807076315156,3.35519002485541,4.16494063332512,4.45872204630035,6.08715426273523,1.72084775396277,0,0.539703191637817,1.29955283489534,0.448026887097336,13.0613310722529,10.3962496772615,9.87186817490901,9.54016851177919,7.32385782838739,1.28326477414318,12.7402619853323,14.2213340630666,0.649473123033642,0.506719730950197,1.51657333504435,3.08296475241462,0.776813650941515,5.78924342352817,11.450031566565,5.78484408793068,7.37969591219387,4.6724018571313,8.11362079236363,6.53466274914312,3.21353458054686,19.0871151134283,2.65383165584962,41.7358472864316,24.7342500675641,16.4857586065976,7.45567044872489,0.878342391034642,2.93225389538837,1.27728527604296,0,0,0,2.39665023047716,1.37250180845588,1.50785222535437,2.60736480288415,1.79000820131231,1.45451631191692,2.43361894601636,8.96186401882783,9.33052279575698,1.26361379216837,4.41927897361595,10.0192741081282,8.73627996847197,10.2635413989049,12.0563854268572,8.70867189136997,9.86475646193343,9.83868107877153,6.72628763921441,5.82033580918674,15.5066985737612,15.4836989264275,18.4124415239163,12.7901734643775,20.89512999133,13.1700567301084,8.7575077400137,0,0,0,64.6232410310766,55.3481501555387,53.8385563768434,56.34524706928,60.0130906829582,58.7757700100911,67.8999118671191,66.2635301457059,43.4367073605871,84.254643155702,59.5927894607116,48.31701048933,46.4915960012557,49.6183260557774,38.1146229279456,1.89260953707715,2.88132914661996,0,0.528901133327089,13.2238715331845,13.237490296045,7.47431275668141,5.24377164020691,6.67134131534611,3.80451252225118,2.84717436926707,1.81168850196412,2.5133520880027,2.58643413653496,4.67913809085888,4.49409704327111,1.72910439899755,0.597423819763102,12.1387456609972,10.1681176222659,9.01661885384643,14.8665469327079,10.4734343070518,8.6968416663995,7.90456714053216,7.38050739898011,10.5189147653721,6.29325536001183,0.889357881261447,5.17219827719892,2.75182593158484,1.79889689907883,1.21716072833102,0.241177159752417,0.763877555344259,1.15078454980324,0.648540907100142,0.823684239564244,2.87536413054709,2.60498663367952,3.74445207737473,1.51547326768267,2.69096120282868,1.4473305640901,5.72734889516475,10.9905018826881,11.4075483509418,11.712410918488,10.3263709246941,9.71536293162531,9.99783291721258,7.41507861859636,12.4531763843891,13.5093460685753,13.2347457985714,9.17634562408133,11.9152637487468,6.07526046042349,0,0,1.96705709207614,1.65562047782839,2.40825884981688,2.46144541843627,7.54100748732707,44.1824122607653,6.31016438832513,3.90438744296638,6.46270193198397,7.64700153448166,6.68396022247182,7.07691326972081,5.26253912177363,5.55286130031493,5.53402889125133,2.57057053137446,12.3487874131194,12.2865266530406,7.98146100832523,7.58862565673663,2.65490276679926,14.5668381692989,12.9999129494843,5.28094223316515,6.20133975049623,5.22639751504677,3.10113951801865,3.27180356529755,7.12994756769443,4.10847785316561,0,1.03135543248187,3.40439605753788,6.84232157318979,9.31382523235832,10.2881776815164,5.32020700926821,7.31312152168489,5.26556865926787,4.56697423671899,0.938686832254841,2.1183207086382,1.32317038832977,4.78170133530292,9.04200789497071,7.11692514152239,6.08798954415996,2.46211349617592,2.33184669303881,2.03967832211561,0.512612642393558,8.2554747185289,4.44466865687308,0.941842285023455,0.546776910884101,0.457556346413045,0,0,0,8.59203556213602,11.3880957689209,9.75933442208874,7.66837919834789,9.82714991268003,8.7345025498471,11.5983337890946,10.9929096114697,15.4436005770577,4.14767914533737,2.4853572523477,1.69107881605257,10.9147078612105,10.9202603701684,16.139448632556,11.1077448190849,14.1923145412254,10.6795087167636,10.416350787516,9.22762230946256,3.62376181239009,7.77681016896237,0.632022241256357,7.9062833963164,4.93012594391171,1.81889152168913,1.61124026100733,1.58945083825012,0.721172697119813,1.32920574457119,1.00966449948148,0.304827226619999,0.403304740547362,0.194915761479505,0.384847366561318,0.233753804363138,22.6730383615211,0.443971906748129,0.0897138566094757,0.671538465456314,17.0006842748328,3.37828455812128,4.02933573387983,1.92931541171159,1.50471631210609,0.564751842617067,1.38097570952153,0.572895513439397,3.09335728218638,2.05524755931193,2.2661816921691,4.72515750162264,2.70192721934532,4.07828168085784,0.51776031175182,9.23707393499172,9.97562183502578,15.0245573063638,19.6916440825318,11.528723944539,8.08911437180062,18.2242316797324,22.2517861818006,17.329637317958,17.9415020352296,19.7713853914387,18.1081287730633,19.945641091085,20.4240236171533,17.9198663141513,23.3383908728706,18.0779548473975,21.4129234714713,25.9614117506083,20.9022466590844,22.9722399098228,16.5052499728184,20.7439485254169,22.3833481613786,22.6803606800947,20.5613497176774,17.3781574229134,19.7302283578382,22.9508952399506,18.5176949647054,19.6934130086129,18.3218337218548,23.735400503842,17.1979893716422,13.8892759906422,12.4905288968973,15.9073493742878,15.2558448374292,30.9887097951526,16.7649478530832,21.7955765483196
|phase1_expression=6.24580503708696,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,4.42225108785563,0,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.831173226792462,0.204169356262369,0,0,0,0,0,0,8.81277725829041,8.41428529121971,9.9115246167308,21.9069576417451,18.7501634487184,12.7417985985994,15.1655321277941,7.13930750289349,20.125359011096,0,0,0,20.5807548828758,30.9456115133857,27.3306208907044,3.64169629547276,4.23192783417626,5.07065122804943,7.79342423759004,5.33576877666684,0.899899717281399,0.988866362566974,2.8419204597844,10.4860038681442,10.373894243682,7.98410014775278,7.96535036156975,7.36137364729837,5.14171771926846,5.30084498283872,4.89963196859816,5.75072826109418,6.43453150627015,1.10115880999389,2.80912143787413,2.30409799884365,4.61602007055678,4.7573574673253,2.6045668527838,1.67509799400829,2.25105044012672,3.20876320331301,4.71405736757868,7.68807076315156,3.35519002485541,4.16494063332512,4.45872204630035,6.08715426273523,1.72084775396277,0,0.539703191637817,1.29955283489534,0.448026887097336,13.0613310722529,10.3962496772615,9.87186817490901,9.54016851177919,7.32385782838739,1.28326477414318,12.7402619853323,14.2213340630666,0.649473123033642,0.506719730950197,1.51657333504435,3.08296475241462,0.776813650941515,5.78924342352817,11.450031566565,5.78484408793068,7.37969591219387,4.6724018571313,8.11362079236363,6.53466274914312,3.21353458054686,19.0871151134283,2.65383165584962,41.7358472864316,24.7342500675641,16.4857586065976,7.45567044872489,0.878342391034642,2.93225389538837,1.27728527604296,0,0,0,2.39665023047716,1.37250180845588,1.50785222535437,2.60736480288415,1.79000820131231,1.45451631191692,2.43361894601636,8.96186401882783,9.33052279575698,1.26361379216837,4.41927897361595,10.0192741081282,8.73627996847197,10.2635413989049,12.0563854268572,8.70867189136997,9.86475646193343,9.83868107877153,6.72628763921441,5.82033580918674,15.5066985737612,15.4836989264275,18.4124415239163,12.7901734643775,20.89512999133,13.1700567301084,8.7575077400137,0,0,0,64.6232410310766,55.3481501555387,53.8385563768434,56.34524706928,60.0130906829582,58.7757700100911,67.8999118671191,66.2635301457059,43.4367073605871,84.254643155702,59.5927894607116,48.31701048933,46.4915960012557,49.6183260557774,38.1146229279456,1.89260953707715,2.88132914661996,0,0.528901133327089,13.2238715331845,13.237490296045,7.47431275668141,5.24377164020691,6.67134131534611,3.80451252225118,2.84717436926707,1.81168850196412,2.5133520880027,2.58643413653496,4.67913809085888,4.49409704327111,1.72910439899755,0.597423819763102,12.1387456609972,10.1681176222659,9.01661885384643,14.8665469327079,10.4734343070518,8.6968416663995,7.90456714053216,7.38050739898011,10.5189147653721,6.29325536001183,0.889357881261447,5.17219827719892,2.75182593158484,1.79889689907883,1.21716072833102,0.241177159752417,0.763877555344259,1.15078454980324,0.648540907100142,0.823684239564244,2.87536413054709,2.60498663367952,3.74445207737473,1.51547326768267,2.69096120282868,1.4473305640901,5.72734889516475,10.9905018826881,11.4075483509418,11.712410918488,10.3263709246941,9.71536293162531,9.99783291721258,7.41507861859636,12.4531763843891,13.5093460685753,13.2347457985714,9.17634562408133,11.9152637487468,6.07526046042349,0,0,1.96705709207614,1.65562047782839,2.40825884981688,2.46144541843627,7.54100748732707,44.1824122607653,6.31016438832513,3.90438744296638,6.46270193198397,7.64700153448166,6.68396022247182,7.07691326972081,5.26253912177363,5.55286130031493,5.53402889125133,2.57057053137446,12.3487874131194,12.2865266530406,7.98146100832523,7.58862565673663,2.65490276679926,14.5668381692989,12.9999129494843,5.28094223316515,6.20133975049623,5.22639751504677,3.10113951801865,3.27180356529755,7.12994756769443,4.10847785316561,0,1.03135543248187,3.40439605753788,6.84232157318979,9.31382523235832,10.2881776815164,5.32020700926821,7.31312152168489,5.26556865926787,4.56697423671899,0.938686832254841,2.1183207086382,1.32317038832977,4.78170133530292,9.04200789497071,7.11692514152239,6.08798954415996,2.46211349617592,2.33184669303881,2.03967832211561,0.512612642393558,8.2554747185289,4.44466865687308,0.941842285023455,0.546776910884101,0.457556346413045,0,0,0,8.59203556213602,11.3880957689209,9.75933442208874,7.66837919834789,9.82714991268003,8.7345025498471,11.5983337890946,10.9929096114697,15.4436005770577,4.14767914533737,2.4853572523477,1.69107881605257,10.9147078612105,10.9202603701684,16.139448632556,11.1077448190849,14.1923145412254,10.6795087167636,10.416350787516,9.22762230946256,3.62376181239009,7.77681016896237,0.632022241256357,7.9062833963164,4.93012594391171,1.81889152168913,1.61124026100733,1.58945083825012,0.721172697119813,1.32920574457119,1.00966449948148,0.304827226619999,0.403304740547362,0.194915761479505,0.384847366561318,0.233753804363138,22.6730383615211,0.443971906748129,0.0897138566094757,0.671538465456314,17.0006842748328,3.37828455812128,4.02933573387983,1.92931541171159,1.50471631210609,0.564751842617067,1.38097570952153,0.572895513439397,3.09335728218638,2.05524755931193,2.2661816921691,4.72515750162264,2.70192721934532,4.07828168085784,0.51776031175182,9.23707393499172,9.97562183502578,15.0245573063638,19.6916440825318,11.528723944539,8.08911437180062,18.2242316797324,22.2517861818006,17.329637317958,17.9415020352296,19.7713853914387,18.1081287730633,19.945641091085,20.4240236171533,17.9198663141513,23.3383908728706,18.0779548473975,21.4129234714713,25.9614117506083,20.9022466590844,22.9722399098228,16.5052499728184,20.7439485254169,22.3833481613786,22.6803606800947,20.5613497176774,17.3781574229134,19.7302283578382,22.9508952399506,18.5176949647054,19.6934130086129,18.3218337218548,23.735400503842,17.1979893716422,13.8892759906422,12.4905288968973,15.9073493742878,15.2558448374292,30.9887097951526,16.7649478530832,21.7955765483196
|short_description=p1@Smarcd3
|short_description=p1@Smarcd3
}}
}}

Latest revision as of 20:44, 25 September 2015

Short description:p1@Smarcd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smarcd3_5end
Coexpression cluster:MCL_coexpression_mm9:19
Association with transcript: 0bp_to_ENSMUST00000144995, NM_025891, uc008wsd.1_5end
EntrezGene:Smarcd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smarcd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.91
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.75
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.58
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E130.95
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.33
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D94.16
Mouse Schwann, donor2.CNhs12573.11746-123F94.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C511.45
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C18.11
adrenal gland, neonate N25.CNhs11223.1377-27I36.53
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H119.09
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F541.74
bone (os femoris), neonate N16.CNhs11225.1525-43A624.73
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.96
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C610.02
eyeball, embryo E14.CNhs10521.399-16E28.74
eyeball, embryo E15.CNhs10593.426-16C910.26
eyeball, embryo E17.CNhs11023.1261-18D412.06
eyeball, neonate N00.CNhs11207.633-15C68.71
eyeball, neonate N01.CNhs11140.1532-43E79.86
eyeball, neonate N02.CNhs11205.1551-44G89.84
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H215.51
forelimb, embryo E13.CNhs10589.384-1E215.48
forelimb, embryo E14.CNhs10577.413-26A818.41
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C420.90
forelimb, embryo E18.CNhs11008.1520-43B513.17
gonad, embryo E13.CNhs11044.1564-45I68.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E964.62
heart, embryo E12.CNhs11015.353-12F555.35
heart, embryo E13.CNhs11013.376-3I953.84
heart, embryo E14.CNhs10597.403-26D456.35
heart, embryo E15.CNhs11017.431-16C860.01
heart, embryo E16.CNhs11021.457-17C658.78
heart, embryo E17.CNhs11025.479-18E567.90
heart, embryo E18.CNhs11030.1283-20G366.26
heart, neonate N00.CNhs11213.639-21E343.44
heart, neonate N03.CNhs11221.1349-25I284.25
heart, neonate N10.CNhs11118.749-24G159.59
heart, neonate N16.CNhs11209.782-15G148.32
heart, neonate N20.CNhs11127.821-26I646.49
heart, neonate N25.CNhs11196.1351-25D349.62
heart, neonate N30.CNhs11202.1390-42D238.11
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I513.22
intestine, embryo E13.CNhs11010.381-16D513.24
intestine, embryo E15.CNhs10602.976-16D87.47
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I912.14
kidney, embryo E15.CNhs10997.434-16F810.17
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I214.87
kidney, embryo E18.CNhs11001.1288-20C710.47
kidney, neonate N00.CNhs11214.646-21G78.70
kidney, neonate N10.CNhs11206.758-6D57.90
kidney, neonate N20.CNhs11113.832-19I17.38
kidney, neonate N25.CNhs11122.1353-25F310.52
kidney, neonate N30.CNhs11203.1385-42H16.29
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G210.99
lung, embryo E14.CNhs10604.404-26F811.41
lung, embryo E15.CNhs11020.432-17C511.71
lung, embryo E16.CNhs10998.458-17B610.33
lung, embryo E17.CNhs10605.480-44A69.72
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C67.42
lung, neonate N06.CNhs11212.683-20E512.45
lung, neonate N07.CNhs11111.715-19A313.51
lung, neonate N10.CNhs11219.750-23E613.23
lung, neonate N20.CNhs11109.822-18A49.18
lung, neonate N25.CNhs11119.1359-25C711.92
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C244.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I712.35
ovary, embryo E18.CNhs11040.505-44H712.29
ovary, neonate N00.CNhs11217.1299-22I47.98
oviduct, adult pregnant day01.CNhs10500.988-6G67.59
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F414.57
pancreas, embryo E15.CNhs11042.1556-45F213.00
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C79.31
pituitary gland, embryo E14.CNhs11037.398-44A510.29
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H37.12
skin, neonate N06.CNhs11097.693-20I56.09
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E311.39
stomach, embryo E15.CNhs10603.1252-16G89.76
stomach, embryo E16.CNhs11022.459-17D47.67
stomach, embryo E17.CNhs11006.1035-18D59.83
stomach, embryo E18.CNhs10999.1286-20C68.73
stomach, neonate N03.CNhs11193.1340-24B811.60
stomach, neonate N07.CNhs11210.718-18A910.99
stomach, neonate N25.CNhs11104.1355-25E415.44
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F510.91
testis, embryo E15.CNhs11034.443-27C510.92
testis, embryo E16.CNhs11033.470-26G516.14
testis, embryo E17.CNhs11029.486-18I511.11
testis, embryo E18.CNhs11027.503-18G514.19
testis, neonate N00.CNhs11189.1300-22B710.68
testis, neonate N07.CNhs11222.726-26I410.42
testis, neonate N10.CNhs11204.763-44D99.23
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I47.91
thymus, embryo E15.CNhs11005.430-45I24.93
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B422.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E417.00
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I89.24
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H215.02
whole body, embryo E14.5.CNhs10578.420-27D219.69
whole body, embryo E14.CNhs10519.395-14B111.53
whole body, embryo E16.CNhs10514.453-14F28.09
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.33
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.95
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.08
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.41
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.96
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.74
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G523.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.20
whole body, embryo E17.5.CNhs10513.490-9F913.89
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B315.91
whole body, neonate N00.CNhs10525.657-19C215.26
whole body, neonate N01.CNhs10576.659-23C630.99
whole body, neonate N06.CNhs10515.692-21D116.76
whole body, neonate N10.CNhs10518.761-6B421.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:24107779..24107825,-&oldid=4213098"