Personal tools

FFCP PHASE1:Mm9::chr2:147872720..147872727,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:147872720..147872727,-
|DHSsupport=NA
|short_description=p9@Foxa2
|DPIdataset=NA
|description=CAGE_peak_9_at_Foxa2_5end
|association_with_transcript=-15bp_to_ENSMUST00000047315,NM_010446,uc008mtb.1_5end
|EntrezGene=15376
|EntrezGene=15376
|HGNC=
|HGNC=
|MCL_coexpression_id=196
|TSSclassifier=NA
|UniProt=P35583
|UniProt=P35583
|association_with_transcript=-15bp_to_ENSMUST00000047315,NM_010446,uc008mtb.1_5end
|cluster_id=chr2:147872720..147872727,-
|description=CAGE_peak_9_at_Foxa2_5end
|id=chr2:147872720..147872727,-
|ontology_enrichment_celltype=CL:0000181!7.88e-10!5;CL:0000417!7.88e-10!5;CL:0000668!7.88e-10!5;CL:0000412!7.88e-10!5;CL:0000182!7.88e-10!5
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!4.51e-24!22;UBERON:0007499!4.51e-24!22;UBERON:0006925!4.51e-24!22;UBERON:0009497!4.51e-24!22;UBERON:0000015!4.51e-24!22;UBERON:0002423!4.51e-24!22;UBERON:0006235!4.51e-24!22;UBERON:0008835!4.51e-24!22;UBERON:0003894!4.51e-24!22;UBERON:0004161!4.51e-24!22;UBERON:0008836!4.51e-24!22;UBERON:0009854!6.85e-23!23;UBERON:0009856!6.85e-23!23;UBERON:0002365!8.24e-21!25;UBERON:0002330!8.24e-21!25;UBERON:0000466!5.13e-18!79;UBERON:0001041!1.09e-17!92;UBERON:0000077!1.70e-16!97;UBERON:0005177!2.25e-16!85;UBERON:0000949!9.70e-14!72;UBERON:0002100!1.67e-13!98;UBERON:0004921!2.00e-11!126;UBERON:0004185!2.00e-11!126;UBERON:0001007!3.69e-11!128;UBERON:0001555!3.69e-11!128;UBERON:0007026!3.69e-11!128;UBERON:0004119!6.68e-11!130;UBERON:0000925!6.68e-11!130;UBERON:0006595!6.68e-11!130;UBERON:0001264!7.19e-11!12;UBERON:0003922!7.19e-11!12;UBERON:0002114!7.19e-11!12;UBERON:0003923!7.19e-11!12;UBERON:0003924!7.19e-11!12;UBERON:0003921!7.19e-11!12;UBERON:0003104!8.93e-11!131;UBERON:0009142!8.93e-11!131;UBERON:0009569!1.78e-10!66;UBERON:0001045!5.85e-10!13;UBERON:0005911!7.53e-10!69;UBERON:0003914!1.24e-09!47;UBERON:0005256!1.24e-09!47;UBERON:0005172!4.07e-09!49;UBERON:0005173!4.07e-09!49;UBERON:0002417!4.07e-09!49;UBERON:0000916!4.07e-09!49;UBERON:0005057!1.21e-08!51;UBERON:0002108!6.55e-08!16;UBERON:0003929!8.48e-08!55;UBERON:0001048!3.05e-07!147;UBERON:0002368!6.64e-07!60
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.26e-16,22;UBERON:0007499,1.26e-16,22;UBERON:0006925,1.26e-16,22;UBERON:0009497,1.26e-16,22;UBERON:0000015,1.26e-16,22;UBERON:0002423,1.26e-16,22;UBERON:0006235,1.26e-16,22;UBERON:0008835,1.26e-16,22;UBERON:0003894,1.26e-16,22;UBERON:0004161,1.26e-16,22;UBERON:0008836,1.26e-16,22;UBERON:0009854,6.04e-16,23;UBERON:0009856,6.04e-16,23;UBERON:0002365,9.61e-15,25;UBERON:0002330,9.61e-15,25;UBERON:0005256,1.45e-08,45;UBERON:0003914,3.12e-08,47;UBERON:0005172,6.29e-08,49;UBERON:0005173,6.29e-08,49;UBERON:0002417,6.29e-08,49;UBERON:0000916,6.29e-08,49;UBERON:0003929,3.83e-07,55
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0.539703191637817,2.59910566979068,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63259991465583,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,1.76805214562978,0.896987067609561,0.964887042726734,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971122544619926,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0.539703191637817,2.59910566979068,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63259991465583,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,1.76805214562978,0.896987067609561,0.964887042726734,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971122544619926,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0
|short_description=p9@Foxa2
}}
}}

Latest revision as of 20:57, 25 September 2015

Short description:p9@Foxa2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Foxa2_5end
Coexpression cluster:MCL_coexpression_mm9:196
Association with transcript: -15bp_to_ENSMUST00000047315, NM_010446, uc008mtb.1_5end
EntrezGene:Foxa2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
1
2
3
4
5
6




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:147872720..147872727,-&oldid=4213712"