FFCP PHASE1:Mm9::chr8:87432606..87432622,+: Difference between revisions
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{{FFCP|EntrezGene=13423|HGNC=|MCL_coexpression_id=38|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128400_5end|description=CAGE_peak_6_at_Dnase2a_5end|id=chr8:87432606..87432622,+|ontology_enrichment_celltype=CL:0000219!1.15e-12!54;CL:0002320!2.39e-12!46;CL:0000134!2.39e-12!46;CL:0000049!1.77e-09!19;CL:0000763!3.14e-08!16;CL:0000988!8.67e-07!32;CL:0002032!8.67e-07!32;CL:0000037!8.67e-07!32;CL:0000566!8.67e-07!32;CL:0000837!8.67e-07!32|ontology_enrichment_celltype_v019_2=CL:0002320,2.80e-17,46;CL:0000134,2.80e-17,46;CL:0000219,2.18e-16,54;CL:0000049,4.47e-16,19;CL:0000763,6.05e-14,16;CL:0000839,3.68e-11,13;CL:0000988,1.12e-10,32;CL:0002032,1.12e-10,32;CL:0000037,1.12e-10,32;CL:0000837,1.12e-10,32;CL:0000557,7.03e-09,7;CL:0000034,1.19e-08,97;CL:0000723,3.66e-08,91;CL:0000048,3.66e-08,91;CL:0002031,4.08e-07,25;CL:0000050,8.85e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.39e-12!46;UBERON:0002204!3.99e-12!32;UBERON:0002405!3.44e-11!70;UBERON:0002371!9.83e-11!16;UBERON:0001474!3.51e-09!22;UBERON:0004765!3.51e-09!22;UBERON:0001434!3.51e-09!22;UBERON:0005256!1.05e-07!47;UBERON:0000926!3.77e-07!193;UBERON:0004120!3.77e-07!193;UBERON:0006603!3.77e-07!193;UBERON:0002365!4.11e-07!25;UBERON:0002330!4.11e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.80e-17,46;UBERON:0002371,3.12e-17,16;UBERON:0002204,7.59e-17,32;UBERON:0001474,8.29e-14,22;UBERON:0004765,8.29e-14,22;UBERON:0001434,8.29e-14,22;UBERON:0002390,5.09e-08,45;UBERON:0003061,5.09e-08,45;UBERON:0002193,6.51e-08,48;UBERON:0002405,6.51e-08,48;UBERON:0002365,7.37e-07,25;UBERON:0002330,7.37e-07,25|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0,0,0.774739940649458,0.563154888606667,0.234064526321993,0.171217968225505,0.159544317990673,0,0.262261207256992,2.99798785634096,2.63217847606774,3.49780939064073,2.83915948822414,3.01651753932625,1.27316895539409,0.595303031057488,2.48227378002213,2.87319768052829,0.159992422793407,0.68822784320151,0,0,0,0,0,0.443461021310609,1.90509202037889,3.07532393792285,0,0,0,0.204169356262369,2.92972141515835,0.7813353445238,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,1.6366586336825,1.01376931219515,0.734187008646726,3.9119567217402,0.65407546914134,1.75748946187577,0.972149495371417,0.699932108126813,0,4.53013036355888,0,0.672187598284928,2.05807548828758,4.01146815914259,1.03134418455488,0,0,0.633831403506179,1.35537812827653,0.889294796111139,31.0465402462083,36.5880554149781,46.1812074714965,9.28760342607055,8.06858441175265,0.103689612308478,0,0,0.856952953211411,0.220868540951614,0,0.0958454710182364,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0.186399445825301,0.227178579999552,1.058001841495,0.869593466105033,2.58127163094416,1.3599426674155,2.69851595818909,1.29955283489534,0.896053774194671,0.702222100658759,2.55645483867087,3.11743205523443,3.5333957451034,0,5.13305909657271,0,0,1.08245520505607,0.253359865475099,0.505524445014783,0.68510327831436,2.33044095282455,0.593768556259299,0.520455980298408,0,0.461230994512117,0.301445281105245,0.705532242814229,0.376999773989026,0.494389935468748,0.433798070759735,1.76922110389975,0.647067399789637,0.883366073841574,1.45462575940567,0,0.292780797011547,0.209446706813455,1.02182822083437,2.27648736561249,1.19980546198682,3.55796635804581,0.449371918214468,0.457500602818626,0,0,0,0,0.162241263067758,0.305518091550949,0.870848794270651,2.52722758433675,0.420883711772948,0.260240885925407,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.431135985865684,0,0.175951124163949,0,1.11218899690239,0.696504333044333,2.05782136407943,0.199034266818493,4.21327912387941,2.31613116403244,3.6941254921427,0.414251545071004,0.469052119962192,0,0,0,0.462801338662135,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.56748166682099,0.292399974850665,0,0.939444931322602,0,0,0,0.528901133327089,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0.494096864172033,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.740382983530803,1.77871576252289,1.16791574001266,0.196558995113203,0.224862112384854,1.62288097110802,2.65294875727659,0.763877555344259,2.30156909960649,1.78348749452539,0.549122826376163,2.87536413054709,1.48856379067401,1.5601883655728,0.757736633841335,0.717589654087649,1.4473305640901,1.66277871149944,0.189491411770485,0.162964976442026,0.678980343100753,0.469380496577004,0.335012514883631,0.714130922658041,0.585400943573396,0.472905432318573,0.44292937929755,0.318909537314974,0.81931657357869,1.20879487306127,1.3018415272336,36.1899081454253,21.2123216689297,1.96705709207614,1.93155722413313,0.160550589987792,0.234423373184406,0.3278698907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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13423 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000128400_5end | |||
|cluster_id=chr8:87432606..87432622,+ | |||
|description=CAGE_peak_6_at_Dnase2a_5end | |||
|id=chr8:87432606..87432622,+ | |||
|ontology_enrichment_celltype=CL:0000219!1.15e-12!54;CL:0002320!2.39e-12!46;CL:0000134!2.39e-12!46;CL:0000049!1.77e-09!19;CL:0000763!3.14e-08!16;CL:0000988!8.67e-07!32;CL:0002032!8.67e-07!32;CL:0000037!8.67e-07!32;CL:0000566!8.67e-07!32;CL:0000837!8.67e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.80e-17,46;CL:0000134,2.80e-17,46;CL:0000219,2.18e-16,54;CL:0000049,4.47e-16,19;CL:0000763,6.05e-14,16;CL:0000839,3.68e-11,13;CL:0000988,1.12e-10,32;CL:0002032,1.12e-10,32;CL:0000037,1.12e-10,32;CL:0000837,1.12e-10,32;CL:0000557,7.03e-09,7;CL:0000034,1.19e-08,97;CL:0000723,3.66e-08,91;CL:0000048,3.66e-08,91;CL:0002031,4.08e-07,25;CL:0000050,8.85e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.39e-12!46;UBERON:0002204!3.99e-12!32;UBERON:0002405!3.44e-11!70;UBERON:0002371!9.83e-11!16;UBERON:0001474!3.51e-09!22;UBERON:0004765!3.51e-09!22;UBERON:0001434!3.51e-09!22;UBERON:0005256!1.05e-07!47;UBERON:0000926!3.77e-07!193;UBERON:0004120!3.77e-07!193;UBERON:0006603!3.77e-07!193;UBERON:0002365!4.11e-07!25;UBERON:0002330!4.11e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.80e-17,46;UBERON:0002371,3.12e-17,16;UBERON:0002204,7.59e-17,32;UBERON:0001474,8.29e-14,22;UBERON:0004765,8.29e-14,22;UBERON:0001434,8.29e-14,22;UBERON:0002390,5.09e-08,45;UBERON:0003061,5.09e-08,45;UBERON:0002193,6.51e-08,48;UBERON:0002405,6.51e-08,48;UBERON:0002365,7.37e-07,25;UBERON:0002330,7.37e-07,25 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0,0,0.774739940649458,0.563154888606667,0.234064526321993,0.171217968225505,0.159544317990673,0,0.262261207256992,2.99798785634096,2.63217847606774,3.49780939064073,2.83915948822414,3.01651753932625,1.27316895539409,0.595303031057488,2.48227378002213,2.87319768052829,0.159992422793407,0.68822784320151,0,0,0,0,0,0.443461021310609,1.90509202037889,3.07532393792285,0,0,0,0.204169356262369,2.92972141515835,0.7813353445238,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,1.6366586336825,1.01376931219515,0.734187008646726,3.9119567217402,0.65407546914134,1.75748946187577,0.972149495371417,0.699932108126813,0,4.53013036355888,0,0.672187598284928,2.05807548828758,4.01146815914259,1.03134418455488,0,0,0.633831403506179,1.35537812827653,0.889294796111139,31.0465402462083,36.5880554149781,46.1812074714965,9.28760342607055,8.06858441175265,0.103689612308478,0,0,0.856952953211411,0.220868540951614,0,0.0958454710182364,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0.186399445825301,0.227178579999552,1.058001841495,0.869593466105033,2.58127163094416,1.3599426674155,2.69851595818909,1.29955283489534,0.896053774194671,0.702222100658759,2.55645483867087,3.11743205523443,3.5333957451034,0,5.13305909657271,0,0,1.08245520505607,0.253359865475099,0.505524445014783,0.68510327831436,2.33044095282455,0.593768556259299,0.520455980298408,0,0.461230994512117,0.301445281105245,0.705532242814229,0.376999773989026,0.494389935468748,0.433798070759735,1.76922110389975,0.647067399789637,0.883366073841574,1.45462575940567,0,0.292780797011547,0.209446706813455,1.02182822083437,2.27648736561249,1.19980546198682,3.55796635804581,0.449371918214468,0.457500602818626,0,0,0,0,0.162241263067758,0.305518091550949,0.870848794270651,2.52722758433675,0.420883711772948,0.260240885925407,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.431135985865684,0,0.175951124163949,0,1.11218899690239,0.696504333044333,2.05782136407943,0.199034266818493,4.21327912387941,2.31613116403244,3.6941254921427,0.414251545071004,0.469052119962192,0,0,0,0.462801338662135,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.56748166682099,0.292399974850665,0,0.939444931322602,0,0,0,0.528901133327089,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0.494096864172033,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.740382983530803,1.77871576252289,1.16791574001266,0.196558995113203,0.224862112384854,1.62288097110802,2.65294875727659,0.763877555344259,2.30156909960649,1.78348749452539,0.549122826376163,2.87536413054709,1.48856379067401,1.5601883655728,0.757736633841335,0.717589654087649,1.4473305640901,1.66277871149944,0.189491411770485,0.162964976442026,0.678980343100753,0.469380496577004,0.335012514883631,0.714130922658041,0.585400943573396,0.472905432318573,0.44292937929755,0.318909537314974,0.81931657357869,1.20879487306127,1.3018415272336,36.1899081454253,21.2123216689297,1.96705709207614,1.93155722413313,0.160550589987792,0.234423373184406,0.327869890753351,1.26235463602186,0.315508219416257,0,0.215423397732799,0.716906393857656,0.222798674082394,1.69845918473299,0.809621403349789,0.292255857911312,0.395287777946524,0,1.13552068166615,0.178065603667255,0,0.329940245945071,0,0.485561272309963,0,0.565815239267694,0,0.307435147943927,0.516856586336442,0,0,0.948110273807448,1.05418608574999,0,0.340439605753788,0.18006109403131,0.646793418913773,0.214337035031592,0,0.535106452806212,0.164549020602121,0.608929898229199,0.469343416127421,1.90648863777438,1.10264199027481,6.43056386471772,2.74489525383039,3.01564624640779,5.37175548014114,6.40149509005739,0.291480836629851,0.741701208042039,3.75915937755276,0.412773735926445,1.66675074632741,5.65105371014073,3.2806614653046,2.74533807847827,1.35982743995084,0.839708713941948,1.52019971184866,0.954670618015114,0,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.539457385539283,0.909188012978695,0.26175594198403,0.129614973291793,1.86401793926078,0,0.448549638131936,0.165458490457098,0,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0.734015410979976,0,0.576060012515731,0.316011120628178,1.21635129174099,0.616265742988964,0.51968329191118,0.716106782669926,0.198681354781265,0.600977247599844,0.443068581523732,0.504832249740738,0.381034033274999,0.100826185136841,0.292373642219257,0.673482891482306,0.233753804363138,1.58711268530648,0.443971906748129,1.34570784914214,0.671538465456314,0.772758376128762,3.56596703357246,0.549454872801795,1.92931541171159,5.517293144389,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.551530525350042,0.222246727801615,0,0.96275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| |||
|short_description=p6@Dnase2a | |||
}} |
Latest revision as of 22:06, 25 September 2015
Short description: | p6@Dnase2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dnase2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000128400_5end |
EntrezGene: | Dnase2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.80e-17 | 46 |
mesenchymal cell | 2.80e-17 | 46 |
motile cell | 2.18e-16 | 54 |
common myeloid progenitor | 4.47e-16 | 19 |
myeloid cell | 6.05e-14 | 16 |
myeloid lineage restricted progenitor cell | 3.68e-11 | 13 |
hematopoietic cell | 1.12e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.12e-10 | 32 |
hematopoietic stem cell | 1.12e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.12e-10 | 32 |
granulocyte monocyte progenitor cell | 7.03e-09 | 7 |
stem cell | 1.19e-08 | 97 |
somatic stem cell | 3.66e-08 | 91 |
multi fate stem cell | 3.66e-08 | 91 |
hematopoietic lineage restricted progenitor cell | 4.08e-07 | 25 |
megakaryocyte-erythroid progenitor cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.80e-17 | 46 |
bone marrow | 3.12e-17 | 16 |
musculoskeletal system | 7.59e-17 | 32 |
bone element | 8.29e-14 | 22 |
skeletal element | 8.29e-14 | 22 |
skeletal system | 8.29e-14 | 22 |
hematopoietic system | 5.09e-08 | 45 |
blood island | 5.09e-08 | 45 |
hemolymphoid system | 6.51e-08 | 48 |
immune system | 6.51e-08 | 48 |
exocrine gland | 7.37e-07 | 25 |
exocrine system | 7.37e-07 | 25 |