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FFCP PHASE1:Mm9::chr7:148042413..148042429,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:148042413..148042429,+
|DHSsupport=NA
|short_description=p4@Ric8
|DPIdataset=NA
|description=CAGE_peak_4_at_Ric8_5end
|association_with_transcript=-426bp_to_ENSMUST00000026558_5end
|EntrezGene=101489
|EntrezGene=101489
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=Q3TIR3
|UniProt=Q3TIR3
|association_with_transcript=-426bp_to_ENSMUST00000026558_5end
|cluster_id=chr7:148042413..148042429,+
|description=CAGE_peak_4_at_Ric8_5end
|id=chr7:148042413..148042429,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,1.30e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002100!3.85e-09!98;UBERON:0009854!4.49e-09!23;UBERON:0009856!4.49e-09!23;UBERON:0002365!4.74e-09!25;UBERON:0002330!4.74e-09!25;UBERON:0005256!4.78e-09!47;UBERON:0002107!1.39e-08!22;UBERON:0007499!1.39e-08!22;UBERON:0006925!1.39e-08!22;UBERON:0009497!1.39e-08!22;UBERON:0000015!1.39e-08!22;UBERON:0002423!1.39e-08!22;UBERON:0006235!1.39e-08!22;UBERON:0008835!1.39e-08!22;UBERON:0003894!1.39e-08!22;UBERON:0004161!1.39e-08!22;UBERON:0008836!1.39e-08!22;UBERON:0005177!1.25e-07!85;UBERON:0000466!1.67e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0009854,6.82e-16,23;UBERON:0009856,6.82e-16,23;UBERON:0002107,5.99e-15,22;UBERON:0007499,5.99e-15,22;UBERON:0006925,5.99e-15,22;UBERON:0009497,5.99e-15,22;UBERON:0000015,5.99e-15,22;UBERON:0002423,5.99e-15,22;UBERON:0006235,5.99e-15,22;UBERON:0008835,5.99e-15,22;UBERON:0003894,5.99e-15,22;UBERON:0004161,5.99e-15,22;UBERON:0008836,5.99e-15,22;UBERON:0002365,2.88e-14,25;UBERON:0002330,2.88e-14,25;UBERON:0005256,3.86e-11,45;UBERON:0002100,2.65e-09,90;UBERON:0005177,6.66e-09,79;UBERON:0003104,9.03e-08,61;UBERON:0009142,9.03e-08,61
|phase1_expression=1.12104192973356,0.697950815278722,0.909998478779072,1.51232105653415,0,0.839396359559449,0.700837921786577,0.258246646883153,0.84473233291,0.468129052643987,0.171217968225505,0.0797721589953364,0.513602189793617,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,0,0.765389611359628,2.28369187762036,2.35079810225042,0.47997726838022,0,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.886922042621219,0.635030673459631,0,0,1.1554064790051,0.332469290716985,1.22501613757421,2.09265815368454,1.5626706890476,1.0470474879476,1.17646297606203,1.36609096991689,1.45653105909346,0.503587271902309,0.912392380975631,0.550640256485045,0,0.436050312760893,0.439372365468944,0.58328969722285,0,0,0.503347818173209,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,0.404632921719196,0.528990979272033,0,1.0165335962074,0,0.899899717281399,0,2.1314403448383,0.898800331555214,0.384218305321555,0.103689612308478,0.405017814995072,0,0.285650984403804,0.883474163806454,0.122490799214954,0.191690942036473,0,0,0.255374676170375,0.307213066512487,0.395658863190582,0,0,0.279182999001381,0,0.15279824777681,0.883885756421003,0.142371680799103,0,0.151452386666368,0.226714680320357,1.73918693221007,2.58127163094416,5.439770669662,8.09554787456726,6.49776417447669,9.40856462904405,1.96622188184453,0,0.259786004602869,0,0.422530259330042,0,0,0,0.649473123033642,2.02687892380079,1.01104889002957,2.51204535381932,0.776813650941515,2.07818994690755,0,0.608930956624282,0.461230994512117,0.452167921657868,0.823120949949934,1.0053327306374,0.741584903203122,3.18118585223806,1.76922110389975,0.970601099684455,0.662524555381181,0,1.86391761218122,0.585561594023094,0.209446706813455,0.766371165625774,2.39630249011841,2.99951365496704,2.1601938602421,0.299581278809645,1.37250180845588,0,0.521472960576829,0.255715457330331,0,0,0.509196819251581,0.995255764880744,0,2.73574412652416,0,0,0,0,0.408218994907967,0.2562274405697,0.281105173679186,0.517406741478031,0.431135985865684,0,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,0.205782136407943,0.398068533636986,0.702213187313235,0.51469581422943,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.467061369468678,0,0.32833492815819,0.405344047729279,0.730999937126662,0.439100230582101,0.536825675041487,0.210289948564127,0.102904612379284,0.330418782983798,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0.251335208800269,1.1937388322469,0.38992817423824,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0.387904974335251,0.350679099451593,0.316182685621286,0.295220295959204,0.470996183524124,0.987177311374404,8.00422093135302,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,1.4470629585145,0.50925170356284,1.43848068725405,7.29608520487659,1.92192989231657,2.87536413054709,2.60498663367952,2.18426371180192,3.53610429125956,3.22915344339442,11.5786445127208,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,1.19021820443007,2.14647012643579,0.945810864637146,0.8858587585951,1.2756381492599,0.81931657357869,0.863424909329478,1.73578870297814,0,1.08781136763742,0.491764273019036,0.827810238914197,0.160550589987792,0.586058432961016,0,1.26235463602186,0.94652465824877,0,0.646270193198397,0.716906393857656,0.891194696329576,0.566153061577665,0,0.584511715822624,0.790575555893047,0,0.851640511249612,0.712262414669021,0.162886959353576,0.659880491890142,2.65490276679926,0.728341908464944,0.302323556964751,1.50884063804718,1.18120757152309,0.922305443831782,1.55056975900933,1.45413491791002,0.712994756769443,0.632073515871632,1.05418608574999,2.06271086496374,0.680879211507576,0.18006109403131,0.258717367565509,0,0.177340233642274,0.356737635204141,0.329098041204242,1.522324745573,0.704015124191131,1.48282449604674,1.10264199027481,1.97863503529776,1.45317984026315,0.301564624640779,0.238744688006273,0.164140899745061,0.874442509889552,0.927126510052548,0.683483523191411,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.228778173206523,1.01987057996313,2.09927178485487,1.65839968565309,0.954670618015114,0.158167996790568,0.609958401380546,0.324016022465404,1.04544148007234,0.655087691238533,0.404593039154462,1.81837602595739,0.785267825952089,1.16653475962614,2.4853572523477,0,0.149516546043979,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.734015410979976,0.483168241652012,0.576060012515731,0,0.810900861160657,0.410843828659309,0.389762468933385,0,0,0.120195449519969,0.295379054349154,0.302899349844443,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.233753804363138,1.81384306892169,0.221985953374065,0.986852422704233,1.00730769818447,1.15913756419314,1.68914227906064,0.73260649706906,0.857473516316263,1.00314420807073,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.888986911206461,0.824140228955577,0.64183841918363,0,0.50695859978048,0.377252682772152,1.03005658216871,0.384150914429216,0.746661096422973,0.476293691283074,0.579421629724277,0.38581844092741,0,0.294397840268795,1.37147700954166,0.354951612318675,0.715308569841963,0.581385666529314,0.282328141245992,0.592302255241736,0.365855945745545,0,0.814824683075171,0,0.593175090620871,0.394017929502254,1.63692417267876,0.464810523557898,0.771626443924566,0.249810577937946,0.701794825336225,1.71896843238639,0.57386499620653,1.76473135295612,0.231867835620421
|phase1_expression=1.12104192973356,0.697950815278722,0.909998478779072,1.51232105653415,0,0.839396359559449,0.700837921786577,0.258246646883153,0.84473233291,0.468129052643987,0.171217968225505,0.0797721589953364,0.513602189793617,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,0,0.765389611359628,2.28369187762036,2.35079810225042,0.47997726838022,0,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.886922042621219,0.635030673459631,0,0,1.1554064790051,0.332469290716985,1.22501613757421,2.09265815368454,1.5626706890476,1.0470474879476,1.17646297606203,1.36609096991689,1.45653105909346,0.503587271902309,0.912392380975631,0.550640256485045,0,0.436050312760893,0.439372365468944,0.58328969722285,0,0,0.503347818173209,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,0.404632921719196,0.528990979272033,0,1.0165335962074,0,0.899899717281399,0,2.1314403448383,0.898800331555214,0.384218305321555,0.103689612308478,0.405017814995072,0,0.285650984403804,0.883474163806454,0.122490799214954,0.191690942036473,0,0,0.255374676170375,0.307213066512487,0.395658863190582,0,0,0.279182999001381,0,0.15279824777681,0.883885756421003,0.142371680799103,0,0.151452386666368,0.226714680320357,1.73918693221007,2.58127163094416,5.439770669662,8.09554787456726,6.49776417447669,9.40856462904405,1.96622188184453,0,0.259786004602869,0,0.422530259330042,0,0,0,0.649473123033642,2.02687892380079,1.01104889002957,2.51204535381932,0.776813650941515,2.07818994690755,0,0.608930956624282,0.461230994512117,0.452167921657868,0.823120949949934,1.0053327306374,0.741584903203122,3.18118585223806,1.76922110389975,0.970601099684455,0.662524555381181,0,1.86391761218122,0.585561594023094,0.209446706813455,0.766371165625774,2.39630249011841,2.99951365496704,2.1601938602421,0.299581278809645,1.37250180845588,0,0.521472960576829,0.255715457330331,0,0,0.509196819251581,0.995255764880744,0,2.73574412652416,0,0,0,0,0.408218994907967,0.2562274405697,0.281105173679186,0.517406741478031,0.431135985865684,0,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,0.205782136407943,0.398068533636986,0.702213187313235,0.51469581422943,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.467061369468678,0,0.32833492815819,0.405344047729279,0.730999937126662,0.439100230582101,0.536825675041487,0.210289948564127,0.102904612379284,0.330418782983798,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0.251335208800269,1.1937388322469,0.38992817423824,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0.387904974335251,0.350679099451593,0.316182685621286,0.295220295959204,0.470996183524124,0.987177311374404,8.00422093135302,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,1.4470629585145,0.50925170356284,1.43848068725405,7.29608520487659,1.92192989231657,2.87536413054709,2.60498663367952,2.18426371180192,3.53610429125956,3.22915344339442,11.5786445127208,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,1.19021820443007,2.14647012643579,0.945810864637146,0.8858587585951,1.2756381492599,0.81931657357869,0.863424909329478,1.73578870297814,0,1.08781136763742,0.491764273019036,0.827810238914197,0.160550589987792,0.586058432961016,0,1.26235463602186,0.94652465824877,0,0.646270193198397,0.716906393857656,0.891194696329576,0.566153061577665,0,0.584511715822624,0.790575555893047,0,0.851640511249612,0.712262414669021,0.162886959353576,0.659880491890142,2.65490276679926,0.728341908464944,0.302323556964751,1.50884063804718,1.18120757152309,0.922305443831782,1.55056975900933,1.45413491791002,0.712994756769443,0.632073515871632,1.05418608574999,2.06271086496374,0.680879211507576,0.18006109403131,0.258717367565509,0,0.177340233642274,0.356737635204141,0.329098041204242,1.522324745573,0.704015124191131,1.48282449604674,1.10264199027481,1.97863503529776,1.45317984026315,0.301564624640779,0.238744688006273,0.164140899745061,0.874442509889552,0.927126510052548,0.683483523191411,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.228778173206523,1.01987057996313,2.09927178485487,1.65839968565309,0.954670618015114,0.158167996790568,0.609958401380546,0.324016022465404,1.04544148007234,0.655087691238533,0.404593039154462,1.81837602595739,0.785267825952089,1.16653475962614,2.4853572523477,0,0.149516546043979,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.734015410979976,0.483168241652012,0.576060012515731,0,0.810900861160657,0.410843828659309,0.389762468933385,0,0,0.120195449519969,0.295379054349154,0.302899349844443,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.233753804363138,1.81384306892169,0.221985953374065,0.986852422704233,1.00730769818447,1.15913756419314,1.68914227906064,0.73260649706906,0.857473516316263,1.00314420807073,0,0.9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|short_description=p4@Ric8
}}
}}

Latest revision as of 03:04, 26 September 2015

Short description:p4@Ric8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ric8_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -426bp_to_ENSMUST00000026558_5end
EntrezGene:Ric8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ric8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H13.18
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F47.30
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte1.30e-075

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum6.82e-1623
sac6.82e-1623
liver5.99e-1522
epithelial sac5.99e-1522
digestive gland5.99e-1522
epithelium of foregut-midgut junction5.99e-1522
anatomical boundary5.99e-1522
hepatobiliary system5.99e-1522
foregut-midgut junction5.99e-1522
hepatic diverticulum5.99e-1522
liver primordium5.99e-1522
septum transversum5.99e-1522
liver bud5.99e-1522
exocrine gland2.88e-1425
exocrine system2.88e-1425
trunk mesenchyme3.86e-1145
trunk2.65e-0990
trunk region element6.66e-0979
mesenchyme9.03e-0861
entire embryonic mesenchyme9.03e-0861
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