FFCP PHASE1:Mm9::chr5:66542427..66542436,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=245945 | |EntrezGene=245945 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=143 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=125bp_to_ENSMUST00000131838_5end | |association_with_transcript=125bp_to_ENSMUST00000131838_5end | ||
|cluster_id=chr5:66542427..66542436,- | |||
|description=CAGE_peak_12_at_Rbm47_5end | |description=CAGE_peak_12_at_Rbm47_5end | ||
|id=chr5:66542427..66542436,- | |id=chr5:66542427..66542436,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.10e-27,3;CL:0000351,3.10e-27,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.10e-27,3;UBERON:0000307,3.10e-27,3;UBERON:0007010,3.10e-27,3;UBERON:0000998,2.48e-10,1;UBERON:0007194,2.48e-10,1;UBERON:0006868,2.48e-10,1;UBERON:0001044,6.88e-10,1;UBERON:0001736,6.88e-10,1;UBERON:0003293,6.88e-10,1;UBERON:0003294,6.88e-10,1;UBERON:0001829,6.88e-10,1;UBERON:0010047,6.88e-10,1;UBERON:0000167,6.88e-10,1;UBERON:0006298,6.88e-10,1 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0.16787927191189,0.467225281191051,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.548457734422955,0,0,0,0,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0.22836775943812,0,0,0,0.304465478312141,0.691846491768175,0.150722640552623,0.117588707135705,0.125666591329675,0.988779870937496,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0.407302655690628,0,0.140271639780637,0.442655759869801,0.885660887877613,0.31399745568275,0.493588655687202,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0,0.358794827043824,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0.983528546038072,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0,0.608929898229199,0.704015124191131,1.69465656691056,0.661585194164886,0.16488625294148,0,0,0,0.164140899745061,1.45740418314925,0,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0.279902904647316,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0.627264888043406,0.655087691238533,0,0,0.26175594198403,0.388844919875379,1.24267862617385,0,0.299033092087958,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0.116876902181569,0,2.88581739386284,9.77881037043285,1.00730769818447,0.386379188064381,0,0.36630324853453,0,2.00628841614145,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0,0.188218760830661,0.338458431566706,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0.16787927191189,0.467225281191051,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.548457734422955,0,0,0,0,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0.22836775943812,0,0,0,0.304465478312141,0.691846491768175,0.150722640552623,0.117588707135705,0.125666591329675,0.988779870937496,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0.407302655690628,0,0.140271639780637,0.442655759869801,0.885660887877613,0.31399745568275,0.493588655687202,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0,0.358794827043824,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0.983528546038072,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0,0.608929898229199,0.704015124191131,1.69465656691056,0.661585194164886,0.16488625294148,0,0,0,0.164140899745061,1.45740418314925,0,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0.279902904647316,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0.627264888043406,0.655087691238533,0,0,0.26175594198403,0.388844919875379,1.24267862617385,0,0.299033092087958,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0.116876902181569,0,2.88581739386284,9.77881037043285,1.00730769818447,0.386379188064381,0,0.36630324853453,0,2.00628841614145,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0,0.188218760830661,0.338458431566706,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p12@Rbm47 | |short_description=p12@Rbm47 | ||
}} | }} |
Latest revision as of 04:01, 26 September 2015
Short description: | p12@Rbm47 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Rbm47_5end |
Coexpression cluster: | MCL_coexpression_mm9:143 |
Association with transcript: | 125bp_to_ENSMUST00000131838_5end |
EntrezGene: | Rbm47 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.10e-27 | 3 |
trophoblast cell | 3.10e-27 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 3.10e-27 | 3 |
blastula | 3.10e-27 | 3 |
cleaving embryo | 3.10e-27 | 3 |
seminal vesicle | 2.48e-10 | 1 |
vesicular gland | 2.48e-10 | 1 |
seminal fluid secreting gland | 2.48e-10 | 1 |
saliva-secreting gland | 6.88e-10 | 1 |
submandibular gland | 6.88e-10 | 1 |
gland of oral region | 6.88e-10 | 1 |
gland of foregut | 6.88e-10 | 1 |
major salivary gland | 6.88e-10 | 1 |
oral gland | 6.88e-10 | 1 |
oral cavity | 6.88e-10 | 1 |
submandibular gland primordium | 6.88e-10 | 1 |