FFCP PHASE1:Mm9::chr5:67819277..67819292,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=666938 | |EntrezGene=666938 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3525 | |MCL_coexpression_id=3525 | ||
|TSSclassifier=NA | |||
|UniProt=P86174 | |UniProt=P86174 | ||
|association_with_transcript=-239bp_to_ENSMUST00000169190,NM_001164806,uc012dws.1_5end | |association_with_transcript=-239bp_to_ENSMUST00000169190,NM_001164806,uc012dws.1_5end | ||
|cluster_id=chr5:67819277..67819292,- | |||
|description=CAGE_peak_7_at_Bend4_5end | |description=CAGE_peak_7_at_Bend4_5end | ||
|id=chr5:67819277..67819292,- | |id=chr5:67819277..67819292,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.74e-34,3;CL:0000351,4.74e-34,3;CL:0000625,2.01e-12,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.74e-34,3;UBERON:0000307,4.74e-34,3;UBERON:0007010,4.74e-34,3 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0.992909512008853,1.30599894569468,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,2.35265659399725,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.838705871541442,0,0.762421362438388,0.299581278809645,0,0,0.173824320192276,0,0.41557608911912,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0.852490498186778,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.37898282354097,0.162964976442026,0,0,0,0.476087281772027,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0.283076530788832,0.809621403349789,0,0,0,0.141940085208269,0.35613120733451,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,1.18984900995699,0.979660166265606,0.829199842826543,0,0,0,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.583353565032143,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,1.57289016638566,0.966336483304024,0.864090018773596,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0,3.32978930061097,4.84454825691169,2.18250001273302,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0.992909512008853,1.30599894569468,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,2.35265659399725,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.838705871541442,0,0.762421362438388,0.299581278809645,0,0,0.173824320192276,0,0.41557608911912,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0.852490498186778,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.37898282354097,0.162964976442026,0,0,0,0.476087281772027,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0.283076530788832,0.809621403349789,0,0,0,0.141940085208269,0.35613120733451,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,1.18984900995699,0.979660166265606,0.829199842826543,0,0,0,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.583353565032143,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,1.57289016638566,0.966336483304024,0.864090018773596,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0,3.32978930061097,4.84454825691169,2.18250001273302,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p7@Bend4 | |short_description=p7@Bend4 | ||
}} | }} |
Latest revision as of 04:26, 26 September 2015
Short description: | p7@Bend4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Bend4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3525 |
Association with transcript: | -239bp_to_ENSMUST00000169190, NM_001164806, uc012dws.1_5end |
EntrezGene: | Bend4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.74e-34 | 3 |
trophoblast cell | 4.74e-34 | 3 |
CD8-positive, alpha-beta T cell | 2.01e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 4.74e-34 | 3 |
blastula | 4.74e-34 | 3 |
cleaving embryo | 4.74e-34 | 3 |