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FFCP PHASE1:Mm9::chr9:113840256..113840306,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22221
|EntrezGene=22221
|HGNC=
|HGNC=
|MCL_coexpression_id=513
|TSSclassifier=NA
|UniProt=Q811S7
|UniProt=Q811S7
|association_with_transcript=204bp_to_ENSMUST00000009885,ENSMUST00000084885,NM_001083319,NM_013699,uc009rwx.1,uc009rwy.1_5end
|association_with_transcript=204bp_to_ENSMUST00000009885,ENSMUST00000084885,NM_001083319,NM_013699,uc009rwx.1,uc009rwy.1_5end
|cluster_id=chr9:113840256..113840306,+
|description=CAGE_peak_1_at_Ubp1_5end
|description=CAGE_peak_1_at_Ubp1_5end
|id=chr9:113840256..113840306,+
|id=chr9:113840256..113840306,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!6.49e-18!130;UBERON:0000925!6.49e-18!130;UBERON:0006595!6.49e-18!130;UBERON:0001007!3.42e-17!128;UBERON:0001555!3.42e-17!128;UBERON:0007026!3.42e-17!128;UBERON:0004921!2.24e-16!126;UBERON:0004185!2.24e-16!126;UBERON:0005409!2.73e-11!59;UBERON:0004923!4.59e-11!24;UBERON:0000160!4.69e-09!43;UBERON:0000490!2.69e-08!66;UBERON:0003929!3.31e-08!55;UBERON:0005911!3.31e-08!69;UBERON:0000344!6.22e-08!15;UBERON:0000077!6.36e-08!97;UBERON:0001242!3.03e-07!13;UBERON:0000060!3.03e-07!13;UBERON:0001262!3.03e-07!13;UBERON:0004786!3.03e-07!13;UBERON:0003104!3.47e-07!131;UBERON:0009142!3.47e-07!131;UBERON:0001041!6.76e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.61e-17,118;UBERON:0000925,2.61e-17,118;UBERON:0006595,2.61e-17,118;UBERON:0001007,1.32e-16,116;UBERON:0001555,1.32e-16,116;UBERON:0007026,1.32e-16,116;UBERON:0004921,8.35e-16,114;UBERON:0005409,1.25e-11,47;UBERON:0004923,4.59e-11,24;UBERON:0000160,1.03e-09,31;UBERON:0000490,2.69e-08,66;UBERON:0003929,3.31e-08,55;UBERON:0005911,3.31e-08,69;UBERON:0000344,6.22e-08,15;UBERON:0001242,3.03e-07,13;UBERON:0001262,3.03e-07,13;UBERON:0004786,3.03e-07,13
|phase1_expression=16.6554800988986,56.8829914452159,56.874904923692,99.5107255199471,108.193477668411,42.8092143375319,42.2838879477901,34.2176807120177,40.4063632575284,44.9403890538227,32.3601959946204,38.3704084767568,27.3921167889929,29.7229368224591,29.3136590397783,44.3420835583719,54.5658264939954,31.0730232877864,31.9476630301371,30.9804445812562,18.28430738248,23.7305373370116,21.4183827093927,28.6386436800198,33.723164316874,36.7508457033613,46.091533589021,35.5527533931717,30.5937705324762,32.0078264795112,24.6120866827388,14.6057054895715,11.6862309641068,0,25.1300909183609,30.4209401006041,26.7461856703704,66.5465292871683,50.786797394047,45.5465657257204,61.7643062432565,66.9384575259277,67.4859390713303,14.7299277031425,13.8886395770735,19.6395024812999,11.7358701652206,11.1192829754028,17.5748946187577,15.3599620268684,14.8385606922884,12.9377307928474,36.4088255145288,33.3666585325218,33.9454737133889,18.7799388306241,19.7708073557742,19.0798674142654,19.4223802425214,13.2247744818008,11.4089652631112,14.2314703469035,18.6751907183339,17.997994345628,12.8552627133707,14.209602298922,9.88680364710736,9.98967593836042,22.1895770340142,18.3608076131099,18.718921560273,14.8538511889978,12.1477697523387,16.4137670948038,19.456630616702,16.5459381589804,9.91042928994498,10.214987046815,11.366883460962,14.9031505135119,13.7231465403614,10.4182674111352,12.5632349550621,8.4414391504752,12.5294563176984,13.8475435172624,12.8134512719193,15.0983551118493,19.1587269132956,24.6363285948121,18.8411917656091,18.0689014166091,25.1589393471868,23.2072372404261,25.9910566979068,35.8421509677868,22.3306628009485,16.0204503223374,10.3914401841148,15.9002808529653,19.4363919291819,16.6824420638613,20.3844191765317,35.5533351576666,15.3708639117962,16.9751109868316,18.1988800205322,27.1757633731363,41.4300613835475,20.0396887737513,14.5727674483554,12.4830846107978,12.6838523490832,13.2635923686308,16.8151851204058,16.2109902815281,30.1577860635936,31.2334610947009,40.6920853896942,19.4120219936891,26.5009822152472,29.0925151881133,24.2309289583559,10.5401086924157,13.1951425292477,36.5303588948286,11.981512450592,5.39912457894067,8.38663498682227,9.8861822007183,6.8625090422794,13.0680526197379,10.2556348913443,10.7400492078739,7.89594569326328,9.40999325792994,15.5814226690984,26.8719056517801,16.6797020566225,36.8273247801329,14.8337304977482,15.4034409970427,14.4049703844279,15.3718914192429,17.2812707844373,16.2704424761759,15.4607845523553,16.298312356558,17.8921434134259,21.936305299467,19.5305747821983,16.001288467213,13.6243152120543,16.0195996600197,17.9030458674911,15.1266042782055,6.31991868581911,11.0659600059328,11.6507034752193,15.7415587126981,15.0096678387902,14.4049649168812,16.0986420197943,11.0187969778546,11.1072321278912,13.4869687955237,18.2425912951741,16.2303825890366,12.5065485934245,15.2675741593559,16.862312385538,14.6199987425332,15.5880581856646,18.2520729514106,10.5144974282064,11.1136981369627,62.118731200954,39.6675849995316,14.9301775374664,18.5789337488351,22.4229382700442,19.7649854130876,25.5734750421601,20.3541419940438,33.2170343081158,20.0932724763293,25.3848560888272,23.2779072288146,26.9050440224386,38.6492345721315,26.8011181844621,45.4042103019957,23.7084876191352,19.0795016058247,15.7790829942313,14.8665469327079,20.1710586654331,19.7081653891795,22.0063149192415,23.4700135287567,18.0548537017581,20.2371348831753,30.8310732170635,33.702711354651,32.4322341936785,35.303351644422,44.2235064626936,39.3118770396439,32.8467348798032,35.0989287689989,27.400853324981,19.7684217495419,18.6898668485561,12.6527922207291,14.3537329632698,23.2372567711343,23.1422663443267,21.2275149399882,23.6484083413254,16.1067700004912,22.8150967018836,17.144253663294,14.0814148973101,18.0906758037161,21.1858840388552,28.8797798829542,20.4925687338048,20.1532867580385,20.5696651568158,19.99132439532,22.1036776788346,25.458234310346,25.6345182696763,27.1952841909355,26.555270743028,21.2471294654644,10.5963389391943,10.5490517932983,13.2787305755107,15.9056684138755,25.871673992133,21.0836921920185,25.4199609324703,24.8527549870654,24.0622568008986,30.2891887944051,24.2886421004937,28.9333299332199,31.2277344577754,7.71171159412337,22.9942938037395,13.7110514823787,15.1484872198826,25.7353391837155,31.8588332015911,16.5090832585387,17.8370898609203,16.7858520982749,20.0805287158925,19.6758494684114,19.6405502807848,20.3578888507403,15.6858846489277,24.018793603122,25.3004660579997,37.1287955693473,10.8940673841212,15.665315180724,16.0404767890616,16.0752776273694,18.4433842987965,12.3074484145429,12.6702745863633,9.74287837166718,26.752574719263,30.0801540626625,27.1249929607603,27.3711179882857,18.2454802166373,21.9539046738487,23.2776070806116,26.2625439592098,34.9777003955821,12.4234952347041,43.0594619610589,19.8131393244694,27.7791791054568,39.1806390569757,49.2099219795691,35.6893950202175,12.4084253895514,13.7152423277185,14.5109972494645,35.3228128665592,20.8781755763549,18.29875204141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|phase1_expression=16.6554800988986,56.8829914452159,56.874904923692,99.5107255199471,108.193477668411,42.8092143375319,42.2838879477901,34.2176807120177,40.4063632575284,44.9403890538227,32.3601959946204,38.3704084767568,27.3921167889929,29.7229368224591,29.3136590397783,44.3420835583719,54.5658264939954,31.0730232877864,31.9476630301371,30.9804445812562,18.28430738248,23.7305373370116,21.4183827093927,28.6386436800198,33.723164316874,36.7508457033613,46.091533589021,35.5527533931717,30.5937705324762,32.0078264795112,24.6120866827388,14.6057054895715,11.6862309641068,0,25.1300909183609,30.4209401006041,26.7461856703704,66.5465292871683,50.786797394047,45.5465657257204,61.7643062432565,66.9384575259277,67.4859390713303,14.7299277031425,13.8886395770735,19.6395024812999,11.7358701652206,11.1192829754028,17.5748946187577,15.3599620268684,14.8385606922884,12.9377307928474,36.4088255145288,33.3666585325218,33.9454737133889,18.7799388306241,19.7708073557742,19.0798674142654,19.4223802425214,13.2247744818008,11.4089652631112,14.2314703469035,18.6751907183339,17.997994345628,12.8552627133707,14.209602298922,9.88680364710736,9.98967593836042,22.1895770340142,18.3608076131099,18.718921560273,14.8538511889978,12.1477697523387,16.4137670948038,19.456630616702,16.5459381589804,9.91042928994498,10.214987046815,11.366883460962,14.9031505135119,13.7231465403614,10.4182674111352,12.5632349550621,8.4414391504752,12.5294563176984,13.8475435172624,12.8134512719193,15.0983551118493,19.1587269132956,24.6363285948121,18.8411917656091,18.0689014166091,25.1589393471868,23.2072372404261,25.9910566979068,35.8421509677868,22.3306628009485,16.0204503223374,10.3914401841148,15.9002808529653,19.4363919291819,16.6824420638613,20.3844191765317,35.5533351576666,15.3708639117962,16.9751109868316,18.1988800205322,27.1757633731363,41.4300613835475,20.0396887737513,14.5727674483554,12.4830846107978,12.6838523490832,13.2635923686308,16.8151851204058,16.2109902815281,30.1577860635936,31.2334610947009,40.6920853896942,19.4120219936891,26.5009822152472,29.0925151881133,24.2309289583559,10.5401086924157,13.1951425292477,36.5303588948286,11.981512450592,5.39912457894067,8.38663498682227,9.8861822007183,6.8625090422794,13.0680526197379,10.2556348913443,10.7400492078739,7.89594569326328,9.40999325792994,15.5814226690984,26.8719056517801,16.6797020566225,36.8273247801329,14.8337304977482,15.4034409970427,14.4049703844279,15.3718914192429,17.2812707844373,16.2704424761759,15.4607845523553,16.298312356558,17.8921434134259,21.936305299467,19.5305747821983,16.001288467213,13.6243152120543,16.0195996600197,17.9030458674911,15.1266042782055,6.31991868581911,11.0659600059328,11.6507034752193,15.7415587126981,15.0096678387902,14.4049649168812,16.0986420197943,11.0187969778546,11.1072321278912,13.4869687955237,18.2425912951741,16.2303825890366,12.5065485934245,15.2675741593559,16.862312385538,14.6199987425332,15.5880581856646,18.2520729514106,10.5144974282064,11.1136981369627,62.118731200954,39.6675849995316,14.9301775374664,18.5789337488351,22.4229382700442,19.7649854130876,25.5734750421601,20.3541419940438,33.2170343081158,20.0932724763293,25.3848560888272,23.2779072288146,26.9050440224386,38.6492345721315,26.8011181844621,45.4042103019957,23.7084876191352,19.0795016058247,15.7790829942313,14.8665469327079,20.1710586654331,19.7081653891795,22.0063149192415,23.4700135287567,18.0548537017581,20.2371348831753,30.8310732170635,33.702711354651,32.4322341936785,35.303351644422,44.2235064626936,39.3118770396439,32.8467348798032,35.0989287689989,27.400853324981,19.7684217495419,18.6898668485561,12.6527922207291,14.3537329632698,23.2372567711343,23.1422663443267,21.2275149399882,23.6484083413254,16.1067700004912,22.8150967018836,17.144253663294,14.0814148973101,18.0906758037161,21.1858840388552,28.8797798829542,20.4925687338048,20.1532867580385,20.5696651568158,19.99132439532,22.1036776788346,25.458234310346,25.6345182696763,27.1952841909355,26.555270743028,21.2471294654644,10.5963389391943,10.5490517932983,13.2787305755107,15.9056684138755,25.871673992133,21.0836921920185,25.4199609324703,24.8527549870654,24.0622568008986,30.2891887944051,24.2886421004937,28.9333299332199,31.2277344577754,7.71171159412337,22.9942938037395,13.7110514823787,15.1484872198826,25.7353391837155,31.8588332015911,16.5090832585387,17.8370898609203,16.7858520982749,20.0805287158925,19.6758494684114,19.6405502807848,20.3578888507403,15.6858846489277,24.018793603122,25.3004660579997,37.1287955693473,10.8940673841212,15.665315180724,16.0404767890616,16.0752776273694,18.4433842987965,12.3074484145429,12.6702745863633,9.74287837166718,26.752574719263,30.0801540626625,27.1249929607603,27.3711179882857,18.2454802166373,21.9539046738487,23.2776070806116,26.2625439592098,34.9777003955821,12.4234952347041,43.0594619610589,19.8131393244694,27.7791791054568,39.1806390569757,49.2099219795691,35.6893950202175,12.4084253895514,13.7152423277185,14.5109972494645,35.3228128665592,20.8781755763549,18.29875204141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|short_description=p1@Ubp1
|short_description=p1@Ubp1
}}
}}

Latest revision as of 06:53, 26 September 2015

Short description:p1@Ubp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ubp1_5end
Coexpression cluster:MCL_coexpression_mm9:513
Association with transcript: 204bp_to_ENSMUST00000009885, ENSMUST00000084885, NM_001083319, NM_013699, uc009rwx.1, uc009rwy.1_5end
EntrezGene:Ubp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ubp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I556.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I656.87
CD326+ enterocyte, pool1.CNhs13542.11848-124I399.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I4108.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I742.81
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I842.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E740.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F244.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E632.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F138.37
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.39
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E829.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A129.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A344.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A554.57
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.07
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A431.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H223.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.42
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D128.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D233.72
GP2+ M cell, pool1.CNhs13228.11845-124H936.75
GP2+ M cell, pool2.CNhs13231.11846-124I146.09
GP2+ M cell, pool3.CNhs13240.11847-124I235.55
Ileum epithelium, pool1.CNhs13199.10252-104B930.59
Ileum epithelium, pool2.CNhs13232.10253-104C132.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C824.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I314.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F525.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F630.42
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G866.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H150.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H345.55
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G961.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H467.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.89
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.64
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A236.41
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I933.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.95
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.08
Mouse Granule cells, donor1.CNhs12131.11713-123C319.42
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C89.89
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.10
Mouse Schwann, donor1.CNhs12507.11728-123D919.16
Mouse Schwann, donor2.CNhs12573.11746-123F924.64
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.21
Mouse hepatocyte, donor6.CNhs13090.11822-124F425.99
Mouse hepatocyte, donor8.CNhs13091.11824-124F635.84
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A722.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.90
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.18
accessory axillary lymph node, adult.CNhs10475.1063-29H941.43
adrenal gland, adult.CNhs10508.49-24D720.04
adrenal gland, embryo E14.CNhs11038.406-44C514.57
adrenal gland, embryo E16.CNhs11004.1254-43D612.48
adrenal gland, embryo E17.CNhs11043.1263-45I112.68
adrenal gland, embryo E18.CNhs11026.1262-18F513.26
adrenal gland, neonate N00.CNhs11191.1311-23C116.82
adrenal gland, neonate N25.CNhs11223.1377-27I316.21
amnion, adult pregnant day17.5.CNhs10488.583-22A830.16
aorta, adult.CNhs10498.46-23H131.23
bone (os femoris), adult.CNhs10483.56-12G240.69
bone (os femoris), neonate N02.CNhs11227.1985-43F519.41
bone (os femoris), neonate N16.CNhs11225.1525-43A626.50
bone (os femoris), neonate N20.CNhs11195.1350-25C329.09
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I213.20
colon, adult.CNhs10468.36-18H736.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.39
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F113.07
cortex, adult.CNhs10473.12-14D510.26
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B29.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A226.87
epididymis, adult.CNhs10490.58-23B216.68
eyeball, adult.CNhs10484.31-12G436.83
eyeball, embryo E12.CNhs11016.345-16C614.83
eyeball, embryo E14.CNhs10521.399-16E215.40
eyeball, embryo E15.CNhs10593.426-16C914.40
eyeball, embryo E17.CNhs11023.1261-18D415.37
eyeball, neonate N00.CNhs11207.633-15C617.28
eyeball, neonate N01.CNhs11140.1532-43E716.27
eyeball, neonate N02.CNhs11205.1551-44G815.46
eyeball, neonate N16.CNhs11188.777-19A216.30
forelimb, embryo E11.CNhs10596.335-25E217.89
forelimb, embryo E12.CNhs10600.359-14H221.94
forelimb, embryo E13.CNhs10589.384-1E219.53
forelimb, embryo E14.CNhs10577.413-26A816.00
forelimb, embryo E15.CNhs11007.437-20E713.62
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B517.90
gonad, embryo E13.CNhs11044.1564-45I615.13
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.65
heart, embryo E11.CNhs10586.331-24E915.74
heart, embryo E12.CNhs11015.353-12F515.01
heart, embryo E13.CNhs11013.376-3I914.40
heart, embryo E14.CNhs10597.403-26D416.10
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C611.11
heart, embryo E17.CNhs11025.479-18E513.49
heart, embryo E18.CNhs11030.1283-20G318.24
heart, neonate N00.CNhs11213.639-21E316.23
heart, neonate N03.CNhs11221.1349-25I212.51
heart, neonate N10.CNhs11118.749-24G115.27
heart, neonate N16.CNhs11209.782-15G116.86
heart, neonate N20.CNhs11127.821-26I614.62
heart, neonate N25.CNhs11196.1351-25D315.59
heart, neonate N30.CNhs11202.1390-42D218.25
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G111.11
intestinal mucosa, adult.CNhs10506.860-29I362.12
intestine, adult.CNhs10496.178-9A339.67
intestine, embryo E12.CNhs11019.1251-16I514.93
intestine, embryo E13.CNhs11010.381-16D518.58
intestine, embryo E15.CNhs10602.976-16D822.42
intestine, embryo E16.CNhs10585.463-22H419.76
intestine, embryo E17.CNhs10582.482-18D325.57
intestine, embryo E18.CNhs10526.1289-20F720.35
intestine, neonate N00.CNhs11126.644-26D133.22
intestine, neonate N01.CNhs11192.1322-23E920.09
intestine, neonate N06.CNhs11102.688-20B825.38
intestine, neonate N07.CNhs11095.720-20F223.28
intestine, neonate N10.CNhs11098.755-23A526.91
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E326.80
intestine, neonate N30.CNhs11131.1384-42G145.40
kidney, embryo E14.CNhs10606.411-4I923.71
kidney, embryo E15.CNhs10997.434-16F819.08
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I214.87
kidney, embryo E18.CNhs11001.1288-20C720.17
kidney, neonate N00.CNhs11214.646-21G719.71
kidney, neonate N10.CNhs11206.758-6D522.01
kidney, neonate N20.CNhs11113.832-19I123.47
kidney, neonate N25.CNhs11122.1353-25F318.05
kidney, neonate N30.CNhs11203.1385-42H120.24
liver, adult pregnant day01.CNhs10466.508-5B230.83
liver, embryo E12.CNhs10601.355-15F833.70
liver, embryo E13.CNhs10524.378-3H632.43
liver, embryo E14.CNhs10594.409-16E135.30
liver, embryo E15.CNhs10520.433-16D744.22
liver, embryo E16.CNhs10523.462-17F539.31
liver, embryo E17.CNhs10510.481-18A332.85
liver, embryo E18.CNhs10579.499-43G435.10
liver, neonate N00.CNhs11117.641-24F427.40
liver, neonate N03.CNhs11123.1345-25G219.77
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B914.35
liver, neonate N20.CNhs11220.823-25A323.24
liver, neonate N25.CNhs11198.1368-26H123.14
liver, neonate N30.CNhs11106.1382-42D121.23
lung, adult.CNhs10474.28-22B123.65
lung, embryo E12.CNhs10522.354-16G216.11
lung, embryo E14.CNhs10604.404-26F822.82
lung, embryo E15.CNhs11020.432-17C517.14
lung, embryo E16.CNhs10998.458-17B614.08
lung, embryo E17.CNhs10605.480-44A618.09
lung, embryo E18.CNhs10583.1287-20I621.19
lung, neonate N00.CNhs11224.640-42C628.88
lung, neonate N06.CNhs11212.683-20E520.49
lung, neonate N07.CNhs11111.715-19A320.15
lung, neonate N10.CNhs11219.750-23E620.57
lung, neonate N20.CNhs11109.822-18A419.99
lung, neonate N25.CNhs11119.1359-25C722.10
lung, neonate N30.CNhs11133.1394-42H225.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A127.20
mammary gland, adult lactating day02.CNhs10480.595-22B626.56
mammary gland, adult pregnant day19.CNhs10476.588-5H221.25
medulla oblongata, adult.CNhs10477.17-12C210.60
medulla oblongata, neonate N30.CNhs11200.1396-42A310.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.91
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.87
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E325.42
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.85
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.06
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D528.93
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D631.23
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I722.99
ovary, embryo E18.CNhs11040.505-44H713.71
ovary, neonate N00.CNhs11217.1299-22I415.15
oviduct, adult pregnant day01.CNhs10500.988-6G625.74
pancreas, adult.CNhs10486.34-16E431.86
pancreas, embryo E14.CNhs11012.405-44F416.51
pancreas, embryo E15.CNhs11042.1556-45F217.84
pancreas, embryo E16.CNhs11003.460-26E516.79
pancreas, embryo E17.CNhs10599.1558-45G320.08
pancreas, embryo E18.CNhs10580.1535-43I719.68
pancreas, neonate N00.CNhs11105.645-26G919.64
pancreas, neonate N01.CNhs11138.1531-43D720.36
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B624.02
pancreas, neonate N25.CNhs11094.1555-45E225.30
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E615.67
pituitary gland, embryo E13.CNhs11009.370-44C716.04
pituitary gland, embryo E14.CNhs11037.398-44A516.08
pituitary gland, embryo E15.CNhs10592.427-16B918.44
pituitary gland, embryo E16.CNhs11036.449-43F612.31
pituitary gland, embryo E17.CNhs11039.1265-44F512.67
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I726.75
placenta, adult pregnant day17.CNhs10464.577-18G330.08
prostate, adult.CNhs10470.859-1F827.12
skin, adult.CNhs10492.30-1C327.37
skin, neonate N00.CNhs11124.650-25G418.25
skin, neonate N03.CNhs11215.662-22H321.95
skin, neonate N06.CNhs11097.693-20I523.28
skin, neonate N10.CNhs11108.762-6C426.26
small intestine, neonate N16.CNhs11114.790-21I134.98
spinal cord, adult.CNhs10505.24-13C912.42
spleen, adult.CNhs10465.25-2G243.06
spleen, embryo E16.CNhs11035.461-43C119.81
spleen, embryo E18.CNhs11011.1271-21F227.78
spleen, neonate N10.CNhs11116.752-24D139.18
spleen, neonate N20.CNhs11112.824-19H149.21
spleen, neonate N25.CNhs11099.1354-25G335.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.51
stomach, adult.CNhs10503.33-1H635.32
stomach, embryo E12.CNhs10588.356-43E320.88
stomach, embryo E15.CNhs10603.1252-16G818.30
stomach, embryo E16.CNhs11022.459-17D419.12
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B820.63
stomach, neonate N07.CNhs11210.718-18A922.65
stomach, neonate N25.CNhs11104.1355-25E426.44
stomach, neonate N30.CNhs11134.1386-42I129.29
submandibular gland, adult.CNhs10469.59-29C120.50
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F520.18
testis, embryo E15.CNhs11034.443-27C516.88
testis, embryo E16.CNhs11033.470-26G516.14
testis, embryo E17.CNhs11029.486-18I511.88
testis, embryo E18.CNhs11027.503-18G514.70
testis, neonate N00.CNhs11189.1300-22B717.37
testis, neonate N07.CNhs11222.726-26I415.49
testis, neonate N10.CNhs11204.763-44D916.78
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B523.38
thymus, embryo E14.CNhs11041.402-44I413.58
thymus, embryo E15.CNhs11005.430-45I215.30
thymus, embryo E16.CNhs11002.456-26C514.94
thymus, embryo E17.CNhs10581.478-18C116.65
thymus, embryo E18.CNhs10595.1273-19G420.07
thymus, neonate N02.CNhs11181.1541-43F819.47
thymus, neonate N03.CNhs11137.2104-43C716.98
thymus, neonate N06.CNhs11197.681-26C417.47
thymus, neonate N07.CNhs11211.713-19D317.76
thymus, neonate N10.CNhs11194.748-24E416.64
thymus, neonate N20.CNhs11186.820-7A221.93
thymus, neonate N25.CNhs11125.1362-25G720.59
thymus, neonate N30.CNhs11132.1393-42G230.15
tongue, adult.CNhs10499.32-1B419.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H334.63
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G536.43
urinary bladder, adult.CNhs10481.879-12E421.64
uterus, adult pregnant day19.CNhs10497.590-15F524.02
uterus, adult.CNhs10509.92-27E526.01
vagina, adult.CNhs10502.89-27D526.58
vesicular gland, adult.CNhs10491.51-27F824.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I819.10
whole body, embryo E12.CNhs10587.857-27C925.94
whole body, embryo E13.CNhs10512.372-23H218.95
whole body, embryo E14.5.CNhs10578.420-27D221.15
whole body, embryo E14.CNhs10519.395-14B122.43
whole body, embryo E16.CNhs10514.453-14F220.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.98
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.28
whole body, embryo E17.5.CNhs10513.490-9F916.40
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B318.48
whole body, neonate N00.CNhs10525.657-19C220.41
whole body, neonate N01.CNhs10576.659-23C617.02
whole body, neonate N06.CNhs10515.692-21D120.29
whole body, neonate N10.CNhs10518.761-6B419.01





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.61e-17118
endoderm2.61e-17118
presumptive endoderm2.61e-17118
digestive system1.32e-16116
digestive tract1.32e-16116
primitive gut1.32e-16116
subdivision of digestive tract8.35e-16114
gastrointestinal system1.25e-1147
organ component layer4.59e-1124
intestine1.03e-0931
unilaminar epithelium2.69e-0866
gut epithelium3.31e-0855
endo-epithelium3.31e-0869
mucosa6.22e-0815
intestinal mucosa3.03e-0713
wall of intestine3.03e-0713
gastrointestinal system mucosa3.03e-0713
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