Personal tools

FFCP PHASE1:Mm9::chr7:19470028..19470058,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:19470028..19470058,+
|DHSsupport=NA
|short_description=p1@Pglyrp1
|DPIdataset=NA
|description=CAGE_peak_1_at_Pglyrp1_5end
|association_with_transcript=0bp_to_ENSMUST00000032573,NM_009402,uc009fjv.1_5end
|EntrezGene=21946
|EntrezGene=21946
|HGNC=
|HGNC=
|MCL_coexpression_id=1005
|TSSclassifier=NA
|UniProt=O88593,Q4FK86
|UniProt=O88593,Q4FK86
|association_with_transcript=0bp_to_ENSMUST00000032573,NM_009402,uc009fjv.1_5end
|cluster_id=chr7:19470028..19470058,+
|description=CAGE_peak_1_at_Pglyrp1_5end
|id=chr7:19470028..19470058,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!4.09e-12!59;UBERON:0004923!7.76e-11!24;UBERON:0000344!2.62e-09!15;UBERON:0004119!3.40e-09!130;UBERON:0000925!3.40e-09!130;UBERON:0006595!3.40e-09!130;UBERON:0001007!5.25e-09!128;UBERON:0001555!5.25e-09!128;UBERON:0007026!5.25e-09!128;UBERON:0004921!3.39e-08!126;UBERON:0004185!3.39e-08!126;UBERON:0000160!4.26e-08!43;UBERON:0001242!4.48e-08!13;UBERON:0000060!4.48e-08!13;UBERON:0001262!4.48e-08!13;UBERON:0004786!4.48e-08!13
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.39e-16,47;UBERON:0000160,2.81e-12,31;UBERON:0004923,6.61e-11,24;UBERON:0004119,1.46e-10,118;UBERON:0000925,1.46e-10,118;UBERON:0006595,1.46e-10,118;UBERON:0001007,2.26e-10,116;UBERON:0001555,2.26e-10,116;UBERON:0007026,2.26e-10,116;UBERON:0004921,1.75e-09,114;UBERON:0000344,2.29e-09,15;UBERON:0001242,4.00e-08,13;UBERON:0001262,4.00e-08,13;UBERON:0004786,4.00e-08,13
|phase1_expression=0.480446541314382,5079.68603359854,5773.48534861382,61.4002348952865,73.631672302113,2171.35050290838,3831.71453104781,29.3109944212378,1.83025338797167,0.70219357896598,0.68487187290202,0.319088635981346,9.75844160607873,4.10875891369288,25.9825614216217,29.3589137715248,29.3815988813822,45.8997450596236,38.9404991440298,52.1999271711577,38.4395671482835,1.48936426801328,0,3702.06467101664,4552.16836421586,7295.04287211722,8305.09128594696,9037.94085500962,872.587542143669,404.256328134929,12722.0097793588,1.27006134691926,0,0,275.275593622965,291.908037249513,209.477759525191,12599.0576800731,11121.5272939518,9941.71589806243,11509.9255263029,10305.790277053,9608.24988648653,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,20.1339127269284,20.3101399763176,23.19047214083,0,0,0.515672092277442,8.29497489524351,8.99284664762456,10.1413024560989,0.338844532069132,0,0,0,0,0.299600110518405,0,4.25127410464758,8.23536223823313,6.52007380189284,33.9924671440526,41.744154239855,8.45186514583183,8.24271050756833,4.5960939330501,17.6185409599022,10.3426743849002,18.8936035905179,8.83638127792299,13.631658896759,11.9810075228055,24.5681039121215,19.1339287410771,12.071061574368,24.4541725943144,25.7692742246376,7.82877672466262,0.454357159999104,0.302286240427142,5.50742528533188,0.860423876981386,1.3599426674155,0,0,0,130.894199562793,0,0,0,0.14084341977668,0,0,0,329.282873378057,262.227460766727,259.839564737599,79.7003480439039,99.1732094368668,2.07818994690755,1.73485326766136,5.78484408793068,11.761390360059,8.74191315205211,8.46638691377075,0.879666139307728,50.922163353281,10.8449517689934,805.880212826336,29.6033335403759,126.763031596266,129.461692587104,540.536107532554,16.9812862266697,15.0801628905688,392.126579745188,4.67278985573089,42.5930939005319,14.8672165675486,30.407499799179,38.8875512395833,15.0785222535437,19.6421481817272,21.9915293304084,24.9345653471472,22.5515355664183,3.05518091550949,195.940978710897,2.27450482590307,130.263508793727,0.130120442962704,0.919608417733892,1.98068342785884,5.57607825992146,4.55844544313897,4.09963904911519,2.71735001223214,35.7010651619842,0,0,0.175951124163949,1.31517439456545,2.22437799380478,2.089512999133,2.67516777330327,4.57778813682534,42.1327912387941,101.395075403198,69.6200573519202,0,0.938104239924385,0.180062061461015,0.946978942340841,0.590292695242212,1.69693824176116,1.62773761325285,6.43856163359086,6.07179780309281,1.15191894939436,4.10418660197738,1.94565142910054,2.33919979880532,1.53685080703735,0.671032093801859,20.6084149592845,23.7709654596147,77.6484140011925,142.53885543165,0.639864751605702,1.39342003116263,16.62390251055,58.0848550915226,85.1707907925853,150.088019002809,153.272886878877,227.449256473859,128.683626905738,158.369351744756,119.123057229782,180.662701139499,222.189915271186,230.008170608794,0.569003702859245,1.37098215131675,0,1.22190796707189,0.969762435838129,1.40271639780637,1.64414996523069,0.442830443938806,0.627994911365499,0.740382983530803,4.15033677922008,10.3443965543978,9.82794975566015,18.6635553279429,50.7150303471257,102.500292894777,179.765851357682,264.680446454746,139.76056548008,61.7763179673183,117.889929352431,70.7067800570156,25.587089195394,4.04126204715379,1.79397413521912,1.92977408545347,73.7165228764753,0.947457058852424,1.46668478797823,2.20668611507745,3.28566347603903,21.4408009525524,71.1750486249181,54.0520204566103,35.7831777121054,27.6830862060969,22.1642128433907,54.0748938561935,53.5323443784276,34.1371778252367,0,0,25.5717421969899,28.4214848693874,35.3211297973142,25.3177243039159,0,17.6729649043061,0,0,0,0,0,0,0,0,0,28.9189184779626,16.0392296285344,17.9846259703928,9.61033060186099,197.469237198125,2.65490276679926,2.91336763385978,4.53485335447127,4.52652191414155,23.9194533233426,13.2197113615889,36.4383893367192,8.36127577798263,6.41695281092498,6.63677191665214,2.10837217149998,1.03135543248187,1.02131881726136,1.08036656418786,2.06973894052407,0.428674070063185,1.06404140185364,1.42695054081656,3.45552943264454,5.48036908406279,119.213227696365,6.14313005505079,2.64634077665954,2.30840754118072,4.84393280087717,1.20625849856312,1.43246812803764,3.93938159388147,123.296393894427,34.4891061739548,175.82613634099,113.719164247736,247.419888565935,102.472440610552,38.274383761887,31.3426097292936,22.7771096191766,54.8609693108739,73.384186090149,203.344841637219,0.474503990371703,19.5186688441775,80.2479682305983,211.388267270628,180.149115090597,62.442192376172,80.2565055093012,74.3386875234644,145.816844953267,274.631976384421,0,1.94371509857172,1.82004339502807,5.25018208528929,10.4619457016962,3.21016638432478,9.03650737572305,2.604087696879,0.314578033277133,0.241584120826006,0.576060012515731,12.6404448251271,4.05450430580328,5.23825881540619,4.54722880422283,13.4270021750611,16.6892338016263,14.3032584928763,14.1781946087594,22.6164847883851,9.44964402521998,12.7040993272419,28.0678696530487,16.7408604454173,14.1421051639698,201.336580650308,0.221985953374065,0.0897138566094757,0.335769232728157,4.056981474676,230.2863973786,299.086602428444,139.339446401393,1.50471631210609,42.9211400388971,35.9053684475598,40.6755814541972,39.0106723920171,19.8673930733486,9.82012066606611,11.4753825039407,10.3573876741571,9.9691329976525,11.9084871702919,0,3.19219898720825,2.56100408631201,15.8019366094391,3.14419743941973,9.37601893095072,50.6722539387683,45.7397827070345,47.1751238099968,39.92615945868,45.6262739802432,38.6683999841456,37.6438860028927,36.8144626327998,35.495119814569,38.579788993929,31.1728836791661,31.2512937151202,30.0822707586414,41.6572943980344,38.0584870147811,36.3825402626642,32.1888856428883,35.6098720749205,37.3614240248863,31.5612487435953,41.3417218692466,39.9865961385521,36.9387189660744,38.1576744727262,35.3532354010039,29.1573267831668,35.1938697125933,31.6071156019371,41.0891081389831,63.2020762183003,69.4776877082863,65.3208004306827,31.5625747913592,85.589470618372,56.5757518913828
|phase1_expression=0.480446541314382,5079.68603359854,5773.48534861382,61.4002348952865,73.631672302113,2171.35050290838,3831.71453104781,29.3109944212378,1.83025338797167,0.70219357896598,0.68487187290202,0.319088635981346,9.75844160607873,4.10875891369288,25.9825614216217,29.3589137715248,29.3815988813822,45.8997450596236,38.9404991440298,52.1999271711577,38.4395671482835,1.48936426801328,0,3702.06467101664,4552.16836421586,7295.04287211722,8305.09128594696,9037.94085500962,872.587542143669,404.256328134929,12722.0097793588,1.27006134691926,0,0,275.275593622965,291.908037249513,209.477759525191,12599.0576800731,11121.5272939518,9941.71589806243,11509.9255263029,10305.790277053,9608.24988648653,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,20.1339127269284,20.3101399763176,23.19047214083,0,0,0.515672092277442,8.29497489524351,8.99284664762456,10.1413024560989,0.338844532069132,0,0,0,0,0.299600110518405,0,4.25127410464758,8.23536223823313,6.52007380189284,33.9924671440526,41.744154239855,8.45186514583183,8.24271050756833,4.5960939330501,17.6185409599022,10.3426743849002,18.8936035905179,8.83638127792299,13.631658896759,11.9810075228055,24.5681039121215,19.1339287410771,12.071061574368,24.4541725943144,25.7692742246376,7.82877672466262,0.454357159999104,0.302286240427142,5.50742528533188,0.860423876981386,1.3599426674155,0,0,0,130.894199562793,0,0,0,0.14084341977668,0,0,0,329.282873378057,262.227460766727,259.839564737599,79.7003480439039,99.1732094368668,2.07818994690755,1.73485326766136,5.78484408793068,11.761390360059,8.74191315205211,8.46638691377075,0.879666139307728,50.922163353281,10.8449517689934,805.880212826336,29.6033335403759,126.763031596266,129.461692587104,540.536107532554,16.9812862266697,15.0801628905688,392.126579745188,4.67278985573089,42.5930939005319,14.8672165675486,30.407499799179,38.8875512395833,15.0785222535437,19.6421481817272,21.9915293304084,24.9345653471472,22.5515355664183,3.05518091550949,195.940978710897,2.27450482590307,130.263508793727,0.130120442962704,0.919608417733892,1.98068342785884,5.57607825992146,4.55844544313897,4.09963904911519,2.71735001223214,35.7010651619842,0,0,0.175951124163949,1.31517439456545,2.22437799380478,2.089512999133,2.67516777330327,4.57778813682534,42.1327912387941,101.395075403198,69.6200573519202,0,0.938104239924385,0.180062061461015,0.946978942340841,0.590292695242212,1.69693824176116,1.62773761325285,6.43856163359086,6.07179780309281,1.15191894939436,4.10418660197738,1.94565142910054,2.33919979880532,1.53685080703735,0.671032093801859,20.6084149592845,23.7709654596147,77.6484140011925,142.53885543165,0.639864751605702,1.39342003116263,16.62390251055,58.0848550915226,85.1707907925853,150.088019002809,153.272886878877,227.449256473859,128.683626905738,158.369351744756,119.123057229782,180.662701139499,222.189915271186,230.008170608794,0.569003702859245,1.37098215131675,0,1.22190796707189,0.969762435838129,1.40271639780637,1.64414996523069,0.442830443938806,0.627994911365499,0.740382983530803,4.15033677922008,10.3443965543978,9.82794975566015,18.6635553279429,50.7150303471257,102.500292894777,179.765851357682,264.680446454746,139.76056548008,61.7763179673183,117.889929352431,70.7067800570156,25.587089195394,4.04126204715379,1.79397413521912,1.92977408545347,73.7165228764753,0.947457058852424,1.46668478797823,2.20668611507745,3.28566347603903,21.4408009525524,71.1750486249181,54.0520204566103,35.7831777121054,27.6830862060969,22.1642128433907,54.0748938561935,53.5323443784276,34.1371778252367,0,0,25.5717421969899,28.4214848693874,35.3211297973142,25.3177243039159,0,17.6729649043061,0,0,0,0,0,0,0,0,0,28.9189184779626,16.0392296285344,17.9846259703928,9.61033060186099,197.469237198125,2.65490276679926,2.91336763385978,4.53485335447127,4.52652191414155,23.9194533233426,13.2197113615889,36.4383893367192,8.36127577798263,6.41695281092498,6.63677191665214,2.10837217149998,1.03135543248187,1.02131881726136,1.08036656418786,2.06973894052407,0.428674070063185,1.06404140185364,1.42695054081656,3.45552943264454,5.48036908406279,119.213227696365,6.14313005505079,2.64634077665954,2.30840754118072,4.84393280087717,1.20625849856312,1.43246812803764,3.93938159388147,123.296393894427,34.4891061739548,175.82613634099,113.719164247736,247.419888565935,102.472440610552,38.274383761887,31.3426097292936,22.7771096191766,54.8609693108739,73.384186090149,203.344841637219,0.474503990371703,19.5186688441775,80.2479682305983,211.388267270628,180.149115090597,62.442192376172,80.2565055093012,74.3386875234644,145.816844953267,274.631976384421,0,1.94371509857172,1.82004339502807,5.25018208528929,10.4619457016962,3.21016638432478,9.03650737572305,2.604087696879,0.314578033277133,0.241584120826006,0.576060012515731,12.6404448251271,4.05450430580328,5.23825881540619,4.54722880422283,13.4270021750611,16.6892338016263,14.3032584928763,14.1781946087594,22.6164847883851,9.44964402521998,12.7040993272419,28.0678696530487,16.7408604454173,14.1421051639698,201.336580650308,0.221985953374065,0.0897138566094757,0.335769232728157,4.056981474676,230.2863973786,299.086602428444,139.339446401393,1.50471631210609,42.9211400388971,35.9053684475598,40.6755814541972,39.0106723920171,19.8673930733486,9.82012066606611,11.4753825039407,10.3573876741571,9.9691329976525,11.9084871702919,0,3.19219898720825,2.56100408631201,15.8019366094391,3.14419743941973,9.37601893095072,50.6722539387683,45.7397827070345,47.1751238099968,39.92615945868,45.6262739802432,38.6683999841456,37.6438860028927,36.8144626327998,35.495119814569,38.579788993929,31.1728836791661,31.2512937151202,30.0822707586414,41.6572943980344,38.0584870147811,36.3825402626642,32.1888856428883,35.6098720749205,37.3614240248863,31.5612487435953,41.3417218692466,39.9865961385521,36.9387189660744,38.1576744727262,35.3532354010039,29.1573267831668,35.1938697125933,31.6071156019371,41.0891081389831,63.2020762183003,69.4776877082863,65.3208004306827,31.5625747913592,85.589470618372,56.5757518913828
|short_description=p1@Pglyrp1
}}
}}

Latest revision as of 07:53, 26 September 2015

Short description:p1@Pglyrp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pglyrp1_5end
Coexpression cluster:MCL_coexpression_mm9:1005
Association with transcript: 0bp_to_ENSMUST00000032573, NM_009402, uc009fjv.1_5end
EntrezGene:Pglyrp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pglyrp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55079.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65773.49
CD326+ enterocyte, pool1.CNhs13542.11848-124I361.40
CD326+ enterocyte, pool2.CNhs13197.11849-124I473.63
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72171.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83831.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E929.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.76
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A125.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.36
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A529.38
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A245.90
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A438.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A652.20
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13702.06
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24552.17
GP2+ M cell, pool1.CNhs13228.11845-124H97295.04
GP2+ M cell, pool2.CNhs13231.11846-124I18305.09
GP2+ M cell, pool3.CNhs13240.11847-124I29037.94
Ileum epithelium, pool1.CNhs13199.10252-104B9872.59
Ileum epithelium, pool2.CNhs13232.10253-104C1404.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812722.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5275.28
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6291.91
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7209.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812599.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111121.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39941.72
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911509.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210305.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49608.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.19
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D541.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7130.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1329.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2262.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3259.84
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B679.70
accessory axillary lymph node, adult.CNhs10475.1063-29H999.17
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I111.76
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A850.92
aorta, adult.CNhs10498.46-23H110.84
bone (os femoris), adult.CNhs10483.56-12G2805.88
bone (os femoris), neonate N02.CNhs11227.1985-43F529.60
bone (os femoris), neonate N16.CNhs11225.1525-43A6126.76
bone (os femoris), neonate N20.CNhs11195.1350-25C3129.46
cecum, adult.CNhs10467.37-13H4540.54
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I215.08
colon, adult.CNhs10468.36-18H7392.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D142.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.87
corpora quadrigemina, adult.CNhs10501.16-22A430.41
corpus striatum, adult.CNhs10487.19-21D838.89
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D519.64
cortex, neonate N30.CNhs11107.1392-42F221.99
diencephalon, adult.CNhs10482.20-12F224.93
diencephalon, neonate N30.CNhs11201.1388-42B222.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2195.94
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G4130.26
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C64.56
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A235.70
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C842.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2101.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D569.62
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E820.61
hippocampus, neonate N00.CNhs11228.627-43G123.77
intestinal mucosa, adult.CNhs10506.860-29I377.65
intestine, adult.CNhs10496.178-9A3142.54
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D816.62
intestine, embryo E16.CNhs10585.463-22H458.08
intestine, embryo E17.CNhs10582.482-18D385.17
intestine, embryo E18.CNhs10526.1289-20F7150.09
intestine, neonate N00.CNhs11126.644-26D1153.27
intestine, neonate N01.CNhs11192.1322-23E9227.45
intestine, neonate N06.CNhs11102.688-20B8128.68
intestine, neonate N07.CNhs11095.720-20F2158.37
intestine, neonate N10.CNhs11098.755-23A5119.12
intestine, neonate N20.CNhs11187.827-18D1180.66
intestine, neonate N25.CNhs11121.1352-25E3222.19
intestine, neonate N30.CNhs11131.1384-42G1230.01
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F810.34
liver, embryo E13.CNhs10524.378-3H69.83
liver, embryo E14.CNhs10594.409-16E118.66
liver, embryo E15.CNhs10520.433-16D750.72
liver, embryo E16.CNhs10523.462-17F5102.50
liver, embryo E17.CNhs10510.481-18A3179.77
liver, embryo E18.CNhs10579.499-43G4264.68
liver, neonate N00.CNhs11117.641-24F4139.76
liver, neonate N03.CNhs11123.1345-25G261.78
liver, neonate N06.CNhs11101.684-20A8117.89
liver, neonate N07.CNhs11103.716-20H270.71
liver, neonate N10.CNhs11115.751-24B925.59
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B173.72
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A621.44
lung, embryo E18.CNhs10583.1287-20I671.18
lung, neonate N00.CNhs11224.640-42C654.05
lung, neonate N06.CNhs11212.683-20E535.78
lung, neonate N07.CNhs11111.715-19A327.68
lung, neonate N10.CNhs11219.750-23E622.16
lung, neonate N20.CNhs11109.822-18A454.07
lung, neonate N25.CNhs11119.1359-25C753.53
lung, neonate N30.CNhs11133.1394-42H234.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B625.57
mammary gland, adult pregnant day19.CNhs10476.588-5H228.42
medulla oblongata, adult.CNhs10477.17-12C235.32
medulla oblongata, neonate N30.CNhs11200.1396-42A325.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C217.67
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I928.92
ovary, adult.CNhs10507.91-2I716.04
ovary, embryo E18.CNhs11040.505-44H717.98
ovary, neonate N00.CNhs11217.1299-22I49.61
oviduct, adult pregnant day01.CNhs10500.988-6G6197.47
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G323.92
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G936.44
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B66.64
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I7119.21
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I1123.30
spinal cord, adult.CNhs10505.24-13C934.49
spleen, adult.CNhs10465.25-2G2175.83
spleen, embryo E16.CNhs11035.461-43C1113.72
spleen, embryo E18.CNhs11011.1271-21F2247.42
spleen, neonate N10.CNhs11116.752-24D1102.47
spleen, neonate N20.CNhs11112.824-19H138.27
spleen, neonate N25.CNhs11099.1354-25G331.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C954.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D373.38
stomach, adult.CNhs10503.33-1H6203.34
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G819.52
stomach, embryo E16.CNhs11022.459-17D480.25
stomach, embryo E17.CNhs11006.1035-18D5211.39
stomach, embryo E18.CNhs10999.1286-20C6180.15
stomach, neonate N03.CNhs11193.1340-24B862.44
stomach, neonate N07.CNhs11210.718-18A980.26
stomach, neonate N25.CNhs11104.1355-25E474.34
stomach, neonate N30.CNhs11134.1386-42I1145.82
submandibular gland, adult.CNhs10469.59-29C1274.63
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I510.46
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B79.04
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I25.24
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C113.43
thymus, embryo E18.CNhs10595.1273-19G416.69
thymus, neonate N02.CNhs11181.1541-43F814.30
thymus, neonate N03.CNhs11137.2104-43C714.18
thymus, neonate N06.CNhs11197.681-26C422.62
thymus, neonate N07.CNhs11211.713-19D39.45
thymus, neonate N10.CNhs11194.748-24E412.70
thymus, neonate N20.CNhs11186.820-7A228.07
thymus, neonate N25.CNhs11125.1362-25G716.74
thymus, neonate N30.CNhs11132.1393-42G214.14
tongue, adult.CNhs10499.32-1B4201.34
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F5230.29
uterus, adult.CNhs10509.92-27E5299.09
vagina, adult.CNhs10502.89-27D5139.34
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.92
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.68
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D739.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D215.80
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G550.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G545.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G547.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G539.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G545.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G538.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G537.64
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G536.81
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G535.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G538.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G531.25
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G541.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G538.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G536.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G537.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G541.34
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G539.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G536.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G538.16
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G535.35
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G535.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.61
whole body, embryo E17.5.CNhs10513.490-9F941.09
whole body, embryo E17.CNhs10517.475-3I563.20
whole body, embryo E18.CNhs10516.493-3B369.48
whole body, neonate N00.CNhs10525.657-19C265.32
whole body, neonate N01.CNhs10576.659-23C631.56
whole body, neonate N06.CNhs10515.692-21D185.59
whole body, neonate N10.CNhs10518.761-6B456.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system3.39e-1647
intestine2.81e-1231
organ component layer6.61e-1124
endoderm-derived structure1.46e-10118
endoderm1.46e-10118
presumptive endoderm1.46e-10118
digestive system2.26e-10116
digestive tract2.26e-10116
primitive gut2.26e-10116
subdivision of digestive tract1.75e-09114
mucosa2.29e-0915
intestinal mucosa4.00e-0813
wall of intestine4.00e-0813
gastrointestinal system mucosa4.00e-0813
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:19470028..19470058,%2B&oldid=4241892"