FFCP PHASE1:Mm9::chr1:133807256..133807279,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=98415 | |EntrezGene=98415 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=5 | |MCL_coexpression_id=5 | ||
|TSSclassifier=NA | |||
|UniProt=Q80XU3 | |UniProt=Q80XU3 | ||
|association_with_transcript=221bp_to_ENSMUST00000062264,NM_001145804,NM_175294,uc007cnx.2,uc007cny.2_5end | |association_with_transcript=221bp_to_ENSMUST00000062264,NM_001145804,NM_175294,uc007cnx.2,uc007cny.2_5end | ||
|cluster_id=chr1:133807256..133807279,+ | |||
|description=CAGE_peak_3_at_Nucks1_5end | |description=CAGE_peak_3_at_Nucks1_5end | ||
|id=chr1:133807256..133807279,+ | |id=chr1:133807256..133807279,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.25e-07!200 | |ontology_enrichment_uberon=UBERON:0000475!9.25e-07!200 | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0.30246421130683,0,0.33575854382378,0.934450562382103,0.387369970324729,0.985521055061667,1.63845168425395,2.56826952338257,0.797721589953364,1.54080656938085,0.699363219351979,0.999329285446988,1.82227740650843,4.89693314689703,0.946386496074713,1.09691546884591,0.42438965179803,1.44573593256819,2.78014663362479,1.82839852397255,1.59992422793407,0.91763712426868,0,0,0,1.14014051673824,0.504060259519861,0,0.635030673459631,0.61506478758457,0,1.1554064790051,1.32987716286794,0.408338712524738,0.418531630736908,0.7813353445238,2.61761871986899,0,0.683045484958446,1.45653105909346,1.25896817975577,1.11514624341466,1.46837401729345,0,1.96222640742402,0.439372365468944,1.55543919259427,2.51975558925653,1.43752564364972,0.838913030288682,0.725362142011344,2.35265659399725,3.8588915405392,1.43266719969378,0.515672092277442,2.22548106945558,6.34789175126439,1.90149421051854,0,0,2.2497492932035,0,0.7104801149461,0.898800331555214,0,4.04389488003063,5.53524347159932,2.10324961351382,1.99955689082663,1.98781686856452,2.08234358665422,5.36734637702124,4.5960939330501,1.10115880999389,2.93680877595932,3.99376986466233,1.45074916503213,4.20843160571084,1.56274011167028,3.35019598801657,2.8138130501584,3.97275444219706,2.65165726926301,5.69486723196412,2.98239113320481,1.28734528666413,1.5870027622425,1.44932244350839,0.860423876981386,1.3599426674155,3.77792234146472,3.24888208723835,0.896053774194671,1.40444420131752,2.72688516124892,3.63700406444016,4.94675404314476,0.985903938436763,5.13305909657271,2.54805239706646,0,4.32982082022428,4.81383744402687,5.05524445014783,1.25602267690966,1.03575153458869,1.1875371125186,2.60227990149204,4.56698217468212,1.15307748628029,5.12456977878917,3.05730638552832,2.76466500925286,1.48316980640624,0.722996784599558,0.884610551949874,2.42650274921114,1.98757366614354,2.90925151881133,0,1.17112318804619,2.51336048176146,1.78819938646014,3.23500836165985,0.599902730993408,1.77898317902291,1.64769703345305,2.28750301409313,5.27748278874031,2.25971616249959,2.30143911597297,2.28566849015516,2.92034273521964,4.88828946481518,1.36847667671102,2.27450482590307,0.631325567659422,5.59517904739626,1.37941262660084,2.70093194708024,6.32960234910003,2.65342346690179,5.76511741281824,3.27956035959051,2.06962696591213,3.66465587985832,2.45837904218165,3.87092473160687,1.97276159184817,4.17070873838397,1.74126083261083,2.88094990971121,3.18454826909589,3.51106593656617,2.05878325691772,3.12579849335152,1.86413195281952,5.8631514995274,4.32148947506436,1.42046841351126,3.93528463494808,3.70241070929708,4.18561100550734,4.29237442239391,3.38619492864792,3.29119699826961,3.2833492815819,1.05389452409612,2.19299981137998,1.97595103761946,1.20785776884335,1.68231958851302,3.70456604565424,0,0.793351699990633,6.18535926552179,4.64473343720877,2.70621668776396,1.61346819698674,0.889512175379481,0.380451252225118,0,1.15289268306808,2.26201687920243,1.39269530428806,1.16978452271472,2.69645822596266,6.48414149624083,1.7922714592893,2.0863469104839,4.68418901699888,2.25415471346161,5.90588850751411,5.43066964069352,3.71719845418688,2.02356918797623,2.65698266363284,3.61097074035162,1.72756029490521,1.48226313543574,1.50160595144485,1.76903095601883,2.9232074610031,2.02860121388503,1.20588579876208,1.01850340712568,1.43848068725405,4.53978634970099,5.21666685057355,70.4464211984037,3.34926852901653,3.74445207737473,3.03094653536534,0.717589654087649,1.4473305640901,0.554259570499814,1.89491411770485,3.58522948172457,5.26209765903083,6.57132695207806,1.34005005953453,1.90434912708811,1.36593553500459,2.52216230569906,3.10050565508285,1.75400245523236,2.94953966488328,2.93564469172023,1.88043776155965,0,3.80733978673097,2.45882136509518,1.10374698521893,0.642202359951168,1.52375192569864,7.04920265119704,2.01976741763498,1.26203287766503,1.56175497718655,1.50796378412959,2.86762557543062,1.78238939265915,1.69845918473299,2.42886421004937,2.63030272120181,0.790575555893047,0.642642632843614,1.13552068166615,2.67098405500883,3.90928702448583,0.494910368917606,0,4.37005145078967,3.02323556964751,3.58349651536206,0.295301892880773,2.76691633149535,1.03371317267288,4.36240475373007,4.9909632973861,2.21225730555071,0,2.06271086496374,2.04263763452273,4.32146625675145,2.97524972700335,1.50035924522115,1.77340233642274,4.28085162244969,3.1264313914403,1.2178597964584,2.11204537257339,0.42366414172764,1.10264199027481,0.65954501176592,1.45317984026315,1.38719727334758,2.38744688006273,1.31312719796049,2.91480836629851,2.78137953015765,2.39219233116994,4.33412422722767,2.96311243791539,6.96963290917357,4.23752105935178,5.0331198105435,1.5298058699447,1.25956307091292,1.24379976423981,0,3.63786392618306,2.64315307264903,4.75223499615926,4.39085421630384,3.49380101993884,2.56242258131159,2.23164330458407,1.57053565190418,2.59229946583586,0.621339313086926,0,2.99033092087958,2.81279433777066,1.75006069509643,3.35815541042101,7.09615727061268,3.87278887530988,3.51551839078665,2.83120229949419,2.65742532908607,0.576060012515731,2.21207784439725,4.66267995167378,4.93012594391171,7.01572444080093,2.14832034800978,3.57626438606277,4.68762253127878,6.4983391956814,6.3608863467333,5.25826965919499,4.83965688656834,4.77543615624787,4.32953287381483,3.3894301632655,0.453460767230423,2.21985953374065,3.6782681209885,5.03653849092235,1.35232715822533,1.12609485270709,0.183151624267265,0.857473516316263,2.00628841614145,7.90652579663893,7.82552902062201,6.87474616127276,6.01486138202907,4.11049511862385,6.0431511791176,4.72515750162264,4.05289082901798,3.62513927187364,9.83744592328458,6.01966615988225,4.38927360741134,1.87806966329548,1.70174701947806,2.93458427679175,1.83843508450014,2.66696073361938,2.06035057238894,0.320919209591815,1.51618327058278,1.52087579934144,1.50901073108861,1.68554713445788,1.40855335290712,0.976402972245426,0.952587382566147,2.20180219295225,3.47236596834669,3.70877310722976,2.64958056241915,2.74295401908332,4.43689515398344,3.33810665926249,2.47088908274958,1.2234219453993,2.28459441307527,3.10977553883713,3.15683653725411,2.98769050460896,2.24456908663095,2.25406534435931,2.36410757701352,2.86461730218783,1.70430525304563,2.12197272079256,1.49886346762768,0.233931608445408,0.214871054048298,0.956441660344217,1.32354851471709,0.695603506861264 | |phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0.30246421130683,0,0.33575854382378,0.934450562382103,0.387369970324729,0.985521055061667,1.63845168425395,2.56826952338257,0.797721589953364,1.54080656938085,0.699363219351979,0.999329285446988,1.82227740650843,4.89693314689703,0.946386496074713,1.09691546884591,0.42438965179803,1.44573593256819,2.78014663362479,1.82839852397255,1.59992422793407,0.91763712426868,0,0,0,1.14014051673824,0.504060259519861,0,0.635030673459631,0.61506478758457,0,1.1554064790051,1.32987716286794,0.408338712524738,0.418531630736908,0.7813353445238,2.61761871986899,0,0.683045484958446,1.45653105909346,1.25896817975577,1.11514624341466,1.46837401729345,0,1.96222640742402,0.439372365468944,1.55543919259427,2.51975558925653,1.43752564364972,0.838913030288682,0.725362142011344,2.35265659399725,3.8588915405392,1.43266719969378,0.515672092277442,2.22548106945558,6.34789175126439,1.90149421051854,0,0,2.2497492932035,0,0.7104801149461,0.898800331555214,0,4.04389488003063,5.53524347159932,2.10324961351382,1.99955689082663,1.98781686856452,2.08234358665422,5.36734637702124,4.5960939330501,1.10115880999389,2.93680877595932,3.99376986466233,1.45074916503213,4.20843160571084,1.56274011167028,3.35019598801657,2.8138130501584,3.97275444219706,2.65165726926301,5.69486723196412,2.98239113320481,1.28734528666413,1.5870027622425,1.44932244350839,0.860423876981386,1.3599426674155,3.77792234146472,3.24888208723835,0.896053774194671,1.40444420131752,2.72688516124892,3.63700406444016,4.94675404314476,0.985903938436763,5.13305909657271,2.54805239706646,0,4.32982082022428,4.81383744402687,5.05524445014783,1.25602267690966,1.03575153458869,1.1875371125186,2.60227990149204,4.56698217468212,1.15307748628029,5.12456977878917,3.05730638552832,2.76466500925286,1.48316980640624,0.722996784599558,0.884610551949874,2.42650274921114,1.98757366614354,2.90925151881133,0,1.17112318804619,2.51336048176146,1.78819938646014,3.23500836165985,0.599902730993408,1.77898317902291,1.64769703345305,2.28750301409313,5.27748278874031,2.25971616249959,2.30143911597297,2.28566849015516,2.92034273521964,4.88828946481518,1.36847667671102,2.27450482590307,0.631325567659422,5.59517904739626,1.37941262660084,2.70093194708024,6.32960234910003,2.65342346690179,5.76511741281824,3.27956035959051,2.06962696591213,3.66465587985832,2.45837904218165,3.87092473160687,1.97276159184817,4.17070873838397,1.74126083261083,2.88094990971121,3.18454826909589,3.51106593656617,2.05878325691772,3.12579849335152,1.86413195281952,5.8631514995274,4.32148947506436,1.42046841351126,3.93528463494808,3.70241070929708,4.18561100550734,4.29237442239391,3.38619492864792,3.29119699826961,3.2833492815819,1.05389452409612,2.19299981137998,1.97595103761946,1.20785776884335,1.68231958851302,3.70456604565424,0,0.793351699990633,6.18535926552179,4.64473343720877,2.70621668776396,1.61346819698674,0.889512175379481,0.380451252225118,0,1.15289268306808,2.26201687920243,1.39269530428806,1.16978452271472,2.69645822596266,6.48414149624083,1.7922714592893,2.0863469104839,4.68418901699888,2.25415471346161,5.90588850751411,5.43066964069352,3.71719845418688,2.02356918797623,2.65698266363284,3.61097074035162,1.72756029490521,1.48226313543574,1.50160595144485,1.76903095601883,2.9232074610031,2.02860121388503,1.20588579876208,1.01850340712568,1.43848068725405,4.53978634970099,5.21666685057355,70.4464211984037,3.34926852901653,3.74445207737473,3.03094653536534,0.717589654087649,1.4473305640901,0.554259570499814,1.89491411770485,3.58522948172457,5.26209765903083,6.57132695207806,1.34005005953453,1.90434912708811,1.36593553500459,2.52216230569906,3.10050565508285,1.75400245523236,2.94953966488328,2.93564469172023,1.88043776155965,0,3.80733978673097,2.45882136509518,1.10374698521893,0.642202359951168,1.52375192569864,7.04920265119704,2.01976741763498,1.26203287766503,1.56175497718655,1.50796378412959,2.86762557543062,1.78238939265915,1.69845918473299,2.42886421004937,2.63030272120181,0.790575555893047,0.642642632843614,1.13552068166615,2.67098405500883,3.90928702448583,0.494910368917606,0,4.37005145078967,3.02323556964751,3.58349651536206,0.295301892880773,2.76691633149535,1.03371317267288,4.36240475373007,4.9909632973861,2.21225730555071,0,2.06271086496374,2.04263763452273,4.32146625675145,2.97524972700335,1.50035924522115,1.77340233642274,4.28085162244969,3.1264313914403,1.2178597964584,2.11204537257339,0.42366414172764,1.10264199027481,0.65954501176592,1.45317984026315,1.38719727334758,2.38744688006273,1.31312719796049,2.91480836629851,2.78137953015765,2.39219233116994,4.33412422722767,2.96311243791539,6.96963290917357,4.23752105935178,5.0331198105435,1.5298058699447,1.25956307091292,1.24379976423981,0,3.63786392618306,2.64315307264903,4.75223499615926,4.39085421630384,3.49380101993884,2.56242258131159,2.23164330458407,1.57053565190418,2.59229946583586,0.621339313086926,0,2.99033092087958,2.81279433777066,1.75006069509643,3.35815541042101,7.09615727061268,3.87278887530988,3.51551839078665,2.83120229949419,2.65742532908607,0.576060012515731,2.21207784439725,4.66267995167378,4.93012594391171,7.01572444080093,2.14832034800978,3.57626438606277,4.68762253127878,6.4983391956814,6.3608863467333,5.25826965919499,4.83965688656834,4.77543615624787,4.32953287381483,3.3894301632655,0.453460767230423,2.21985953374065,3.6782681209885,5.03653849092235,1.35232715822533,1.12609485270709,0.183151624267265,0.857473516316263,2.00628841614145,7.90652579663893,7.82552902062201,6.87474616127276,6.01486138202907,4.11049511862385,6.0431511791176,4.72515750162264,4.05289082901798,3.62513927187364,9.83744592328458,6.01966615988225,4.38927360741134,1.87806966329548,1.70174701947806,2.93458427679175,1.83843508450014,2.66696073361938,2.06035057238894,0.320919209591815,1.51618327058278,1.52087579934144,1.50901073108861,1.68554713445788,1.40855335290712,0.976402972245426,0.952587382566147,2.20180219295225,3.47236596834669,3.70877310722976,2.64958056241915,2.74295401908332,4.43689515398344,3.33810665926249,2.47088908274958,1.2234219453993,2.28459441307527,3.10977553883713,3.15683653725411,2.98769050460896,2.24456908663095,2.25406534435931,2.36410757701352,2.86461730218783,1.70430525304563,2.12197272079256,1.49886346762768,0.233931608445408,0.214871054048298,0.956441660344217,1.32354851471709,0.695603506861264 | ||
|short_description=p3@Nucks1 | |short_description=p3@Nucks1 | ||
}} | }} |
Latest revision as of 08:44, 26 September 2015
Short description: | p3@Nucks1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nucks1_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | 221bp_to_ENSMUST00000062264, NM_001145804, NM_175294, uc007cnx.2, uc007cny.2_5end |
EntrezGene: | Nucks1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data