Personal tools

FFCP PHASE1:Mm9::chr1:138846079..138846103,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=26424|HGNC=|MCL_coexpression_id=3234|UniProt=Q1WLP7|association_with_transcript=35bp_to_uc007cva.2_5end|description=CAGE_peak_6_at_Nr5a2_5end|id=chr1:138846079..138846103,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,6.70e-09,25;CL:0000182,1.03e-07,5;CL:0000223,1.66e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.49e-24!43;UBERON:0005409!6.56e-21!59;UBERON:0001007!1.35e-19!128;UBERON:0001555!1.35e-19!128;UBERON:0007026!1.35e-19!128;UBERON:0004119!1.85e-19!130;UBERON:0000925!1.85e-19!130;UBERON:0006595!1.85e-19!130;UBERON:0004921!1.31e-18!126;UBERON:0004185!1.31e-18!126;UBERON:0002107!3.48e-14!22;UBERON:0007499!3.48e-14!22;UBERON:0006925!3.48e-14!22;UBERON:0009497!3.48e-14!22;UBERON:0000015!3.48e-14!22;UBERON:0002423!3.48e-14!22;UBERON:0006235!3.48e-14!22;UBERON:0008835!3.48e-14!22;UBERON:0003894!3.48e-14!22;UBERON:0004161!3.48e-14!22;UBERON:0008836!3.48e-14!22;UBERON:0009854!4.15e-13!23;UBERON:0009856!4.15e-13!23;UBERON:0002108!1.57e-12!16;UBERON:0000466!1.36e-11!79;UBERON:0002365!3.06e-11!25;UBERON:0002330!3.06e-11!25;UBERON:0001264!5.04e-10!12;UBERON:0003922!5.04e-10!12;UBERON:0002114!5.04e-10!12;UBERON:0003923!5.04e-10!12;UBERON:0003924!5.04e-10!12;UBERON:0003921!5.04e-10!12;UBERON:0001045!8.36e-09!13;UBERON:0005177!1.04e-07!85;UBERON:0000344!1.62e-07!15;UBERON:0001041!4.92e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.52e-23,31;UBERON:0002107,2.34e-19,22;UBERON:0007499,2.34e-19,22;UBERON:0006925,2.34e-19,22;UBERON:0009497,2.34e-19,22;UBERON:0000015,2.34e-19,22;UBERON:0002423,2.34e-19,22;UBERON:0006235,2.34e-19,22;UBERON:0008835,2.34e-19,22;UBERON:0003894,2.34e-19,22;UBERON:0004161,2.34e-19,22;UBERON:0008836,2.34e-19,22;UBERON:0009854,2.86e-18,23;UBERON:0009856,2.86e-18,23;UBERON:0001264,2.43e-17,12;UBERON:0002365,2.31e-16,25;UBERON:0002330,2.31e-16,25;UBERON:0001007,7.28e-16,116;UBERON:0001555,7.28e-16,116;UBERON:0007026,7.28e-16,116;UBERON:0004119,2.22e-15,118;UBERON:0000925,2.22e-15,118;UBERON:0006595,2.22e-15,118;UBERON:0004921,1.36e-14,114;UBERON:0005409,3.80e-14,47;UBERON:0000949,5.43e-12,72;UBERON:0002075,3.58e-11,19;UBERON:0005177,5.77e-11,79;UBERON:0003929,1.66e-10,55;UBERON:0000344,4.70e-10,15;UBERON:0002100,1.43e-08,90;UBERON:0001242,1.71e-08,13;UBERON:0001262,1.71e-08,13;UBERON:0004786,1.71e-08,13;UBERON:0000490,1.24e-07,66;UBERON:0005911,5.05e-07,69;UBERON:0005256,8.31e-07,45|phase1_expression=0,1.39590163055744,3.18499467572675,3.32710632437513,3.50627010962443,2.51818907867835,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,1.14704640533585,1.14846392823004,4.30761996159075,2.15471232685889,2.47030445293286,5.54466285471848,2.21730510655305,0,0,0,1.1554064790051,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0,0.931997229126503,0,0,2.02905142091174,2.58127163094416,3.39985666853875,5.93673510801599,3.89865850468601,5.82434953226536,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0.517875767294343,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0,3.83185582812887,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0,0.536825675041487,0,0,0,2.3800550999719,1.2797295032114,0.696710015581316,2.19074684247559,3.22693639397348,4.00280478920767,2.09248188723815,3.32170343081158,2.30578536613615,3.2673577144035,4.17808591286417,3.8992817423824,1.79763881730844,3.24207074812041,2.38969527905241,0,0.228497025219458,0,0,0,0,0,0,0,0,4.74324203339438,0.83422552858047,1.17935397067922,1.57403478669398,0.811440485554012,0.964708639009667,1.78238096246994,3.45235364940973,5.67473293712624,1.09824565275233,24.4405951096503,1.11642284300551,1.5601883655728,7.32478746046624,4.4849353380478,9.16642690590398,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.952174563544055,0,0.472905432318573,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6455063906201,0.178065603667255,0.162886959353576,0.329940245945071,6.63725691699814,2.42780636154981,5.74414758233027,7.54420319023592,5.02013217897314,4.61152721915891,5.16856586336442,4.36240475373007,2.85197902707777,7.9009189483954,2.10837217149998,7.21948802737308,0.340439605753788,0,0,0.428674070063185,0,0.178368817602071,0,0,0,0.42366414172764,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,3.78925087618806,0,0,1.23832120777933,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,0,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.777689839750757,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.563047426353546,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.888986911206461,0.824140228955577,0.320919209591815,0.505394423527595,0.760437899670719,0.754505365544305,0.561849044819294,0.832326981263301,0.402048282689293,0,0.463537303779422,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.177475806159338,0.953744759789284,0.290692833264657,0.188218760830661,0.423073039458382,0.548783918618318,1.31534855718921,0.679020569229309,0,0.474540072496697,0.886540341380071,0.818462086339379,0.929621047115796,0.771626443924566,0,0.701794825336225,0.644613162144895,0,0.220591419119515,0|short_description=p6@Nr5a2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=26424
|HGNC=
|MCL_coexpression_id=3234
|TSSclassifier=NA
|UniProt=Q1WLP7
|association_with_transcript=35bp_to_uc007cva.2_5end
|cluster_id=chr1:138846079..138846103,-
|description=CAGE_peak_6_at_Nr5a2_5end
|id=chr1:138846079..138846103,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,6.70e-09,25;CL:0000182,1.03e-07,5;CL:0000223,1.66e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.49e-24!43;UBERON:0005409!6.56e-21!59;UBERON:0001007!1.35e-19!128;UBERON:0001555!1.35e-19!128;UBERON:0007026!1.35e-19!128;UBERON:0004119!1.85e-19!130;UBERON:0000925!1.85e-19!130;UBERON:0006595!1.85e-19!130;UBERON:0004921!1.31e-18!126;UBERON:0004185!1.31e-18!126;UBERON:0002107!3.48e-14!22;UBERON:0007499!3.48e-14!22;UBERON:0006925!3.48e-14!22;UBERON:0009497!3.48e-14!22;UBERON:0000015!3.48e-14!22;UBERON:0002423!3.48e-14!22;UBERON:0006235!3.48e-14!22;UBERON:0008835!3.48e-14!22;UBERON:0003894!3.48e-14!22;UBERON:0004161!3.48e-14!22;UBERON:0008836!3.48e-14!22;UBERON:0009854!4.15e-13!23;UBERON:0009856!4.15e-13!23;UBERON:0002108!1.57e-12!16;UBERON:0000466!1.36e-11!79;UBERON:0002365!3.06e-11!25;UBERON:0002330!3.06e-11!25;UBERON:0001264!5.04e-10!12;UBERON:0003922!5.04e-10!12;UBERON:0002114!5.04e-10!12;UBERON:0003923!5.04e-10!12;UBERON:0003924!5.04e-10!12;UBERON:0003921!5.04e-10!12;UBERON:0001045!8.36e-09!13;UBERON:0005177!1.04e-07!85;UBERON:0000344!1.62e-07!15;UBERON:0001041!4.92e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.52e-23,31;UBERON:0002107,2.34e-19,22;UBERON:0007499,2.34e-19,22;UBERON:0006925,2.34e-19,22;UBERON:0009497,2.34e-19,22;UBERON:0000015,2.34e-19,22;UBERON:0002423,2.34e-19,22;UBERON:0006235,2.34e-19,22;UBERON:0008835,2.34e-19,22;UBERON:0003894,2.34e-19,22;UBERON:0004161,2.34e-19,22;UBERON:0008836,2.34e-19,22;UBERON:0009854,2.86e-18,23;UBERON:0009856,2.86e-18,23;UBERON:0001264,2.43e-17,12;UBERON:0002365,2.31e-16,25;UBERON:0002330,2.31e-16,25;UBERON:0001007,7.28e-16,116;UBERON:0001555,7.28e-16,116;UBERON:0007026,7.28e-16,116;UBERON:0004119,2.22e-15,118;UBERON:0000925,2.22e-15,118;UBERON:0006595,2.22e-15,118;UBERON:0004921,1.36e-14,114;UBERON:0005409,3.80e-14,47;UBERON:0000949,5.43e-12,72;UBERON:0002075,3.58e-11,19;UBERON:0005177,5.77e-11,79;UBERON:0003929,1.66e-10,55;UBERON:0000344,4.70e-10,15;UBERON:0002100,1.43e-08,90;UBERON:0001242,1.71e-08,13;UBERON:0001262,1.71e-08,13;UBERON:0004786,1.71e-08,13;UBERON:0000490,1.24e-07,66;UBERON:0005911,5.05e-07,69;UBERON:0005256,8.31e-07,45
|phase1_expression=0,1.39590163055744,3.18499467572675,3.32710632437513,3.50627010962443,2.51818907867835,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,1.14704640533585,1.14846392823004,4.30761996159075,2.15471232685889,2.47030445293286,5.54466285471848,2.21730510655305,0,0,0,1.1554064790051,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0,0.931997229126503,0,0,2.02905142091174,2.58127163094416,3.39985666853875,5.93673510801599,3.89865850468601,5.82434953226536,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0.517875767294343,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0,3.83185582812887,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0,0.536825675041487,0,0,0,2.3800550999719,1.2797295032114,0.696710015581316,2.19074684247559,3.22693639397348,4.00280478920767,2.09248188723815,3.32170343081158,2.30578536613615,3.2673577144035,4.17808591286417,3.8992817423824,1.79763881730844,3.24207074812041,2.38969527905241,0,0.228497025219458,0,0,0,0,0,0,0,0,4.74324203339438,0.83422552858047,1.17935397067922,1.57403478669398,0.811440485554012,0.964708639009667,1.78238096246994,3.45235364940973,5.67473293712624,1.09824565275233,24.4405951096503,1.11642284300551,1.5601883655728,7.32478746046624,4.4849353380478,9.16642690590398,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.952174563544055,0,0.472905432318573,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6455063906201,0.178065603667255,0.162886959353576,0.329940245945071,6.63725691699814,2.42780636154981,5.74414758233027,7.54420319023592,5.02013217897314,4.61152721915891,5.16856586336442,4.36240475373007,2.85197902707777,7.9009189483954,2.10837217149998,7.21948802737308,0.340439605753788,0,0,0.428674070063185,0,0.178368817602071,0,0,0,0.42366414172764,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,3.78925087618806,0,0,1.23832120777933,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,0,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.777689839750757,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.563047426353546,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.888986911206461,0.824140228955577,0.320919209591815,0.505394423527595,0.760437899670719,0.754505365544305,0.561849044819294,0.832326981263301,0.402048282689293,0,0.463537303779422,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.177475806159338,0.953744759789284,0.290692833264657,0.188218760830661,0.423073039458382,0.548783918618318,1.31534855718921,0.679020569229309,0,0.474540072496697,0.886540341380071,0.818462086339379,0.929621047115796,0.771626443924566,0,0.701794825336225,0.644613162144895,0,0.220591419119515,0
|short_description=p6@Nr5a2
}}

Latest revision as of 11:30, 26 September 2015

Short description:p6@Nr5a2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Nr5a2_5end
Coexpression cluster:MCL_coexpression_mm9:3234
Association with transcript: 35bp_to_uc007cva.2_5end
EntrezGene:Nr5a2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Nr5a2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H14.48
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I710.65
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell6.70e-0925
hepatocyte1.03e-075
endodermal cell1.66e-0720

Uber anatomy
Ontology termp-valuen
intestine1.52e-2331
liver2.34e-1922
epithelial sac2.34e-1922
digestive gland2.34e-1922
epithelium of foregut-midgut junction2.34e-1922
anatomical boundary2.34e-1922
hepatobiliary system2.34e-1922
foregut-midgut junction2.34e-1922
hepatic diverticulum2.34e-1922
liver primordium2.34e-1922
septum transversum2.34e-1922
liver bud2.34e-1922
digestive tract diverticulum2.86e-1823
sac2.86e-1823
pancreas2.43e-1712
exocrine gland2.31e-1625
exocrine system2.31e-1625
digestive system7.28e-16116
digestive tract7.28e-16116
primitive gut7.28e-16116
endoderm-derived structure2.22e-15118
endoderm2.22e-15118
presumptive endoderm2.22e-15118
subdivision of digestive tract1.36e-14114
gastrointestinal system3.80e-1447
endocrine system5.43e-1272
viscus3.58e-1119
trunk region element5.77e-1179
gut epithelium1.66e-1055
mucosa4.70e-1015
trunk1.43e-0890
intestinal mucosa1.71e-0813
wall of intestine1.71e-0813
gastrointestinal system mucosa1.71e-0813
unilaminar epithelium1.24e-0766
endo-epithelium5.05e-0769
trunk mesenchyme8.31e-0745
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:138846079..138846103,-&oldid=4251203"