FFCP PHASE1:Mm9::chr4:134828621..134828632,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=29876 | |EntrezGene=29876 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3458 | |||
|TSSclassifier=NA | |||
|UniProt=Q543N5,Q9QYB1 | |UniProt=Q543N5,Q9QYB1 | ||
|association_with_transcript=42bp_to_NM_013885,uc008vgd.1_5end | |association_with_transcript=42bp_to_NM_013885,uc008vgd.1_5end | ||
|cluster_id=chr4:134828621..134828632,- | |||
|description=CAGE_peak_4_at_Clic4_5end | |description=CAGE_peak_4_at_Clic4_5end | ||
|id=chr4:134828621..134828632,- | |id=chr4:134828621..134828632,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.64e-11!23;UBERON:0001009!3.64e-11!23;UBERON:0004872!1.94e-10!33;UBERON:0007100!3.65e-09!18;UBERON:0000948!3.65e-09!18;UBERON:0005498!3.65e-09!18;UBERON:0004140!3.65e-09!18;UBERON:0009881!3.65e-09!18;UBERON:0004141!3.65e-09!18;UBERON:0003084!3.65e-09!18;UBERON:0007005!3.65e-09!18;UBERON:0004139!3.65e-09!18;UBERON:0004291!3.65e-09!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.56e-11,23;UBERON:0001009,3.56e-11,23;UBERON:0004872,1.90e-10,33;UBERON:0007100,3.58e-09,18;UBERON:0000948,3.58e-09,18;UBERON:0005498,3.58e-09,18;UBERON:0004140,3.58e-09,18;UBERON:0009881,3.58e-09,18;UBERON:0004141,3.58e-09,18;UBERON:0003084,3.58e-09,18;UBERON:0007005,3.58e-09,18;UBERON:0004139,3.58e-09,18;UBERON:0004291,3.58e-09,18 | |||
|phase1_expression=6.56610273129655,3.14077866875425,5.0049916332849,0,0,2.01455126294268,1.86890112476421,0.645616617207881,13.2341398822567,15.9163877898956,4.62288514208863,3.74929147278081,0.684802919724823,0.786783621770977,3.33109761815663,2.63217847606774,4.89693314689703,0.946386496074713,0.959801035240171,1.27316895539409,4.93251082876205,4.96454756004426,3.6567970479451,1.27993938234725,2.2940928106717,2.8711598205751,3.01533397311352,1.72376986148711,1.52018735565099,0.756090389279792,3.76941868114018,1.27006134691926,2.46025915033828,0,0.866554859253824,0.664938581433969,0,2.09265815368454,0,0.523523743973798,0.588231488031014,2.04913645487534,0.485510353031154,7.55380907853464,7.40051597902456,5.68994931701213,7.04152209913235,5.66865406589161,8.78744730937887,8.1660557611199,7.69925318939494,10.062679505548,1.34226084846189,0.725362142011344,1.34437519656986,17.7509010864803,18.9112070359579,18.0485232297105,1.41621522601718,2.11596391708813,1.90149421051854,8.4711133017283,10.6715375533337,4.94944844504769,7.9109309005358,6.3943210345149,7.78960287347852,5.76327457982332,1.34796496001021,1.08004750665353,1.47227472945967,3.71346279724945,3.09215957332259,0.979926393719632,1.34183659425531,0,1.10115880999389,2.68143409978894,2.76491759861238,0.923204014111357,0.548925861614458,0.52091337055676,1.67509799400829,1.12552522006336,0.916789486660861,0.589257170947335,1.85083185038834,0.559198337475902,15.5995958266359,15.870027622425,15.6526823898906,1.72084775396277,13.599426674155,0,1.94932925234301,1.79210754838934,3.08977724289854,15.5091593546033,16.6263042945836,21.5537140451308,1.83096445709685,16.6824420638613,15.2883143823987,28.4426681261332,6.061749148314,8.61423542615335,3.0331466700887,2.2836775943812,5.95557132388495,1.7813056687779,1.90833859442749,1.21786191324856,1.15307748628029,1.50722640552623,3.05730638552832,2.38766523526383,11.3709685157812,9.9773556274739,4.42305275974937,6.95597454773859,4.63767188766826,4.84875253135222,5.59175283654366,0.292780797011547,1.25668024088073,1.53274233125155,11.2626217035565,6.59893004092748,8.38663498682227,1.64769703345305,2.28750301409313,0.125654352112864,1.04294592115366,1.02286182932132,2.90903262383384,1.94689515681309,5.6011650117674,3.11017426525233,1.26361379216837,2.31486041475121,2.34216797332867,1.60931473103431,3.42118046630164,2.41127708537144,2.9255694635071,3.58718416797579,2.34254311399322,1.81092359517311,5.17363183038821,2.26927296201383,3.51902248327898,2.6303487891309,3.33656699070717,3.83077383174383,3.2925141825271,2.18937693500343,2.1066395619397,4.63226232806487,3.9782889915383,8.07790512888457,5.8631514995274,5.94204802821349,9.46978942340841,7.67380503814875,8.17615698303105,5.11574678450897,7.51165523918934,16.1136172466694,9.54447129498187,9.85004784474571,8.75543143095242,7.30999937126662,10.5384055339704,8.85762363818454,0.420579897128254,1.3377599609307,2.64335026387038,1.32225283331772,2.98603550749328,3.71578674976702,2.83508414908605,3.02525286935014,1.77902435075896,1.14135375667535,2.37264530772256,5.59976446061637,4.77536896720512,3.78017296878187,4.67913809085888,3.59527763461689,2.37751854862164,2.58883655230677,5.31070122668629,2.51346727741403,2.25415471346161,3.66572390121566,2.52138233317913,6.10181633045771,3.03535378196435,4.42830443938806,3.1399745568275,4.56569506510662,1.1858105083486,4.00428253718626,3.93117990226406,3.59779379815766,5.07150303471257,3.61765739628625,4.58326533206556,4.31544206176216,4.53978634970099,2.74561413188081,0,4.09355042435354,2.80833905803104,2.77836765741823,2.69096120282868,3.37710464954357,7.944387177164,2.84237117655727,3.58522948172457,3.39490171550376,2.34690248288502,5.19269398069629,4.76087281772027,9.75668239288994,7.56648691709717,8.63712289630222,5.58091690301205,10.1595255123758,7.59813920209941,9.25753974921674,7.53956419696361,10.8781136763742,4.91764273019036,2.75936746304733,2.24770825982909,2.93029216480508,2.95082901678016,3.02965112645248,3.15508219416257,2.34263246577983,2.36965737506079,1.67278158566786,1.55959071857676,3.67999490025482,2.83367491172426,2.04579100537918,1.97643888973262,5.46246237917072,2.41298144854057,2.13678724400706,4.39794790254655,2.47455184458803,5.30980553359851,2.6705869977048,1.81394134178851,2.64047111658257,2.65771703592696,3.3817866273832,6.71913562237375,3.27180356529755,4.9909632973861,4.42451461110142,4.21674434299995,6.18813259489121,0.680879211507576,1.98067203434441,2.71653235943784,2.57204442037911,2.48276327099183,3.0322698992352,2.30368628842969,6.08929898229199,11.7335854031855,12.4980921809654,3.96951116498931,4.61681508236144,5.9741837877485,3.98065304525829,4.65552141612232,4.59594519286172,2.33184669303881,1.66882771809459,4.61351378154202,2.88941615148511,2.22233432843654,2.82552685507037,3.96413260390973,3.20289442489132,11.728511669576,10.636310376598,9.39759821870082,10.5013767981662,3.63786392618306,1.82987520414164,3.13215488383224,1.88179466413022,2.18362563746178,4.72025212346872,6.52962300230154,2.87931536182433,1.94422459937689,0.621339313086926,27.0572610568411,1.34564891439581,1.15820943319968,3.30567020184881,3.09983576346555,1.85851738039856,3.16864544343536,2.604087696879,2.51662426621706,13.5287107662563,17.5698303817298,0.948033361884535,2.02725215290164,2.36235201479103,2.5984164595559,1.61124026100733,1.19208812868759,1.32214994471966,1.03382669022204,1.31256384932592,2.28620419965,1.00826185136841,1.36441033035653,1.44317762460494,1.16876902181569,2.94749498699775,11.5432695754514,7.71539166841491,14.941730856403,4.82973985080476,10.322536149815,2.93042598827624,1.2862102744744,8.02515366456581,1.6942555278512,0,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,1.35004500046361,0,0.453142408984205,0,1.66059756134683,3.19219898720825,2.90247129782028,2.43106717068294,4.40187641518763,4.22840069435032,2.66696073361938,3.7086310303001,1.92551525755089,4.80124702351215,3.29523089857312,5.09291121742406,4.02658482120494,4.41773551593598,3.10151532360312,4.28664322154766,2.89710814862139,3.27945674788299,4.12085900803307,2.50238164228475,4.4573002810104,2.66213709239006,3.57654284920981,4.0696996657052,4.32903149910521,3.80765735512544,4.39027134894654,3.15683653725411,3.80251518768413,6.17256498823512,4.62676570684279,2.75812550651578,6.13846564754534,4.18329471202108,5.20847849649082,4.24677982494508,3.97683734357194,4.94203424311086,9.18183993930448,7.27951683094401,6.26043156175138 | |phase1_expression=6.56610273129655,3.14077866875425,5.0049916332849,0,0,2.01455126294268,1.86890112476421,0.645616617207881,13.2341398822567,15.9163877898956,4.62288514208863,3.74929147278081,0.684802919724823,0.786783621770977,3.33109761815663,2.63217847606774,4.89693314689703,0.946386496074713,0.959801035240171,1.27316895539409,4.93251082876205,4.96454756004426,3.6567970479451,1.27993938234725,2.2940928106717,2.8711598205751,3.01533397311352,1.72376986148711,1.52018735565099,0.756090389279792,3.76941868114018,1.27006134691926,2.46025915033828,0,0.866554859253824,0.664938581433969,0,2.09265815368454,0,0.523523743973798,0.588231488031014,2.04913645487534,0.485510353031154,7.55380907853464,7.40051597902456,5.68994931701213,7.04152209913235,5.66865406589161,8.78744730937887,8.1660557611199,7.69925318939494,10.062679505548,1.34226084846189,0.725362142011344,1.34437519656986,17.7509010864803,18.9112070359579,18.0485232297105,1.41621522601718,2.11596391708813,1.90149421051854,8.4711133017283,10.6715375533337,4.94944844504769,7.9109309005358,6.3943210345149,7.78960287347852,5.76327457982332,1.34796496001021,1.08004750665353,1.47227472945967,3.71346279724945,3.09215957332259,0.979926393719632,1.34183659425531,0,1.10115880999389,2.68143409978894,2.76491759861238,0.923204014111357,0.548925861614458,0.52091337055676,1.67509799400829,1.12552522006336,0.916789486660861,0.589257170947335,1.85083185038834,0.559198337475902,15.5995958266359,15.870027622425,15.6526823898906,1.72084775396277,13.599426674155,0,1.94932925234301,1.79210754838934,3.08977724289854,15.5091593546033,16.6263042945836,21.5537140451308,1.83096445709685,16.6824420638613,15.2883143823987,28.4426681261332,6.061749148314,8.61423542615335,3.0331466700887,2.2836775943812,5.95557132388495,1.7813056687779,1.90833859442749,1.21786191324856,1.15307748628029,1.50722640552623,3.05730638552832,2.38766523526383,11.3709685157812,9.9773556274739,4.42305275974937,6.95597454773859,4.63767188766826,4.84875253135222,5.59175283654366,0.292780797011547,1.25668024088073,1.53274233125155,11.2626217035565,6.59893004092748,8.38663498682227,1.64769703345305,2.28750301409313,0.125654352112864,1.04294592115366,1.02286182932132,2.90903262383384,1.94689515681309,5.6011650117674,3.11017426525233,1.26361379216837,2.31486041475121,2.34216797332867,1.60931473103431,3.42118046630164,2.41127708537144,2.9255694635071,3.58718416797579,2.34254311399322,1.81092359517311,5.17363183038821,2.26927296201383,3.51902248327898,2.6303487891309,3.33656699070717,3.83077383174383,3.2925141825271,2.18937693500343,2.1066395619397,4.63226232806487,3.9782889915383,8.07790512888457,5.8631514995274,5.94204802821349,9.46978942340841,7.67380503814875,8.17615698303105,5.11574678450897,7.51165523918934,16.1136172466694,9.54447129498187,9.85004784474571,8.75543143095242,7.30999937126662,10.5384055339704,8.85762363818454,0.420579897128254,1.3377599609307,2.64335026387038,1.32225283331772,2.98603550749328,3.71578674976702,2.83508414908605,3.02525286935014,1.77902435075896,1.14135375667535,2.37264530772256,5.59976446061637,4.77536896720512,3.78017296878187,4.67913809085888,3.59527763461689,2.37751854862164,2.58883655230677,5.31070122668629,2.51346727741403,2.25415471346161,3.66572390121566,2.52138233317913,6.10181633045771,3.03535378196435,4.42830443938806,3.1399745568275,4.56569506510662,1.1858105083486,4.00428253718626,3.93117990226406,3.59779379815766,5.07150303471257,3.61765739628625,4.58326533206556,4.31544206176216,4.53978634970099,2.74561413188081,0,4.09355042435354,2.80833905803104,2.77836765741823,2.69096120282868,3.37710464954357,7.944387177164,2.84237117655727,3.58522948172457,3.39490171550376,2.34690248288502,5.19269398069629,4.76087281772027,9.75668239288994,7.56648691709717,8.63712289630222,5.58091690301205,10.1595255123758,7.59813920209941,9.25753974921674,7.53956419696361,10.8781136763742,4.91764273019036,2.75936746304733,2.24770825982909,2.93029216480508,2.95082901678016,3.02965112645248,3.15508219416257,2.34263246577983,2.36965737506079,1.67278158566786,1.55959071857676,3.67999490025482,2.83367491172426,2.04579100537918,1.97643888973262,5.46246237917072,2.41298144854057,2.13678724400706,4.39794790254655,2.47455184458803,5.30980553359851,2.6705869977048,1.81394134178851,2.64047111658257,2.65771703592696,3.3817866273832,6.71913562237375,3.27180356529755,4.9909632973861,4.42451461110142,4.21674434299995,6.18813259489121,0.680879211507576,1.98067203434441,2.71653235943784,2.57204442037911,2.48276327099183,3.0322698992352,2.30368628842969,6.08929898229199,11.7335854031855,12.4980921809654,3.96951116498931,4.61681508236144,5.9741837877485,3.98065304525829,4.65552141612232,4.59594519286172,2.33184669303881,1.66882771809459,4.61351378154202,2.88941615148511,2.22233432843654,2.82552685507037,3.96413260390973,3.20289442489132,11.728511669576,10.636310376598,9.39759821870082,10.5013767981662,3.63786392618306,1.82987520414164,3.13215488383224,1.88179466413022,2.18362563746178,4.72025212346872,6.52962300230154,2.87931536182433,1.94422459937689,0.621339313086926,27.0572610568411,1.34564891439581,1.15820943319968,3.30567020184881,3.09983576346555,1.85851738039856,3.16864544343536,2.604087696879,2.51662426621706,13.5287107662563,17.5698303817298,0.948033361884535,2.02725215290164,2.36235201479103,2.5984164595559,1.61124026100733,1.19208812868759,1.32214994471966,1.03382669022204,1.31256384932592,2.28620419965,1.00826185136841,1.36441033035653,1.44317762460494,1.16876902181569,2.94749498699775,11.5432695754514,7.71539166841491,14.941730856403,4.82973985080476,10.322536149815,2.93042598827624,1.2862102744744,8.02515366456581,1.6942555278512,0,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,1.35004500046361,0,0.453142408984205,0,1.66059756134683,3.19219898720825,2.90247129782028,2.43106717068294,4.40187641518763,4.22840069435032,2.66696073361938,3.7086310303001,1.92551525755089,4.80124702351215,3.29523089857312,5.09291121742406,4.02658482120494,4.41773551593598,3.10151532360312,4.28664322154766,2.89710814862139,3.27945674788299,4.12085900803307,2.50238164228475,4.4573002810104,2.66213709239006,3.57654284920981,4.0696996657052,4.32903149910521,3.80765735512544,4.39027134894654,3.15683653725411,3.80251518768413,6.17256498823512,4.62676570684279,2.75812550651578,6.13846564754534,4.18329471202108,5.20847849649082,4.24677982494508,3.97683734357194,4.94203424311086,9.18183993930448,7.27951683094401,6.26043156175138 | ||
|short_description=p4@Clic4 | |short_description=p4@Clic4 | ||
}} | }} |
Latest revision as of 12:33, 26 September 2015
Short description: | p4@Clic4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Clic4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3458 |
Association with transcript: | 42bp_to_NM_013885, uc008vgd.1_5end |
EntrezGene: | Clic4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.56e-11 | 23 |
circulatory system | 3.56e-11 | 23 |
splanchnic layer of lateral plate mesoderm | 1.90e-10 | 33 |
primary circulatory organ | 3.58e-09 | 18 |
heart | 3.58e-09 | 18 |
primitive heart tube | 3.58e-09 | 18 |
primary heart field | 3.58e-09 | 18 |
anterior lateral plate mesoderm | 3.58e-09 | 18 |
heart tube | 3.58e-09 | 18 |
heart primordium | 3.58e-09 | 18 |
cardiac mesoderm | 3.58e-09 | 18 |
cardiogenic plate | 3.58e-09 | 18 |
heart rudiment | 3.58e-09 | 18 |