FFCP PHASE1:Mm9::chr12:40974606..40974654,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=15982|HGNC=|MCL_coexpression_id=3|UniProt=E9Q1E6|association_with_transcript=11bp_to_ENSMUST00000169926_5end|description=CAGE_peak_2_at_Ifrd1_5end|id=chr12:40974606..40974654,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,5.93e-07,3;CL:0002202,5.93e-07,3;CL:0000069,5.93e-07,3;CL:0002632,5.93e-07,3;CL:0002368,5.93e-07,3;CL:0000307,5.93e-07,3;CL:0000377,5.93e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,7.85e-08,3;DOID:4045,7.85e-08,3|ontology_enrichment_uberon=UBERON:0000926!6.13e-11!193;UBERON:0004120!6.13e-11!193;UBERON:0006603!6.13e-11!193;UBERON:0003104!1.98e-09!131;UBERON:0009142!1.98e-09!131;UBERON:0000464!8.06e-09!57;UBERON:0005177!8.68e-09!85;UBERON:0002100!1.07e-08!98;UBERON:0009569!1.65e-08!66;UBERON:0000466!1.04e-07!79;UBERON:0000945!5.21e-07!16;UBERON:0010039!5.21e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.57e-14,90;UBERON:0005177,3.36e-13,79;UBERON:0002369,6.63e-10,7;UBERON:0006858,6.63e-10,7;UBERON:0009569,4.37e-09,66;UBERON:0005178,6.03e-08,17;UBERON:0005181,6.03e-08,17;UBERON:0002224,6.03e-08,17;UBERON:0000915,6.03e-08,17;UBERON:0008947,6.03e-08,17;UBERON:0003258,6.03e-08,17;UBERON:0002075,4.35e-07,19;UBERON:0003126,5.93e-07,3;UBERON:0001005,5.93e-07,3;UBERON:0007196,5.93e-07,3;UBERON:0001558,5.93e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.607425802169478,0,0.315462165358238,0.274228867211478,0,0.17008658030214,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.2269355667419,22.6587249911902,24.0820922227947,34.7056577938298,38.9335926426314,31.0726625939938,0,0.202753862439029,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,3.46385665617943,3.04031838570118,2.52762222507392,0.22836775943812,0,1.33597925158342,0.346970653532272,1.52232739156071,3.45923245884088,3.61734337326294,3.76283862834255,1.50799909595611,0,0.86759614151947,3.5384422077995,0.323533699894818,2.65009822152472,0.484875253135222,0,0,0,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,2.36373244159177,0.252722758433675,0,0,0,0.720248519221397,0.753524089178575,1.15662048557257,0.640568601424249,0.749613796477831,0.517406741478031,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0.414251545071004,0.938104239924385,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0.492502392237286,0.486412857275134,0.730999937126662,0.658650345873152,2.54992195644706,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0,0.420814919341911,0.252946148497029,0.147610147979602,0.31399745568275,0.616985819609003,0,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,1.2731292589071,1.72617682470486,0.324270453550071,0.274561413188081,2.87536413054709,0,0,0,0,0,0.923765950833023,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0.780534591431195,2.20689201748667,1.55025282754142,1.2756381492599,1.96635977658886,1.72684981865896,3.7608755231193,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,2.6968616189571,0,0.488660878060728,1.48473110675282,2.65490276679926,0,0,0.377210159511796,0,0,0.516856586336442,3.27180356529755,1.78248689192361,3.16036757935816,5.27093042874994,5.15677716240934,5.44703369206061,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0,0.238744688006273,0.164140899745061,0,0,0.512612642393558,0.82554747185289,2.40752885580625,1.13021074202815,1.50363650493128,0.686334519619568,0.849892149969277,0.979660166265606,0.690999869022119,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,1.67270636811575,0.218362563746178,1.21377911746339,0.661227645802687,0.785267825952089,0.259229946583586,0,0,0.448549638131936,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.821500670520278,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0.375364950902364,1.28206136987086,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.37456602987953,0.0640251524048693,0.287177344778066,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.429742108096597,0,0.661774257358546,1.15933917810211|short_description=p2@Ifrd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15982 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q1E6 | |||
|association_with_transcript=11bp_to_ENSMUST00000169926_5end | |||
|cluster_id=chr12:40974606..40974654,- | |||
|description=CAGE_peak_2_at_Ifrd1_5end | |||
|id=chr12:40974606..40974654,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.93e-07,3;CL:0002202,5.93e-07,3;CL:0000069,5.93e-07,3;CL:0002632,5.93e-07,3;CL:0002368,5.93e-07,3;CL:0000307,5.93e-07,3;CL:0000377,5.93e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.85e-08,3;DOID:4045,7.85e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000926!6.13e-11!193;UBERON:0004120!6.13e-11!193;UBERON:0006603!6.13e-11!193;UBERON:0003104!1.98e-09!131;UBERON:0009142!1.98e-09!131;UBERON:0000464!8.06e-09!57;UBERON:0005177!8.68e-09!85;UBERON:0002100!1.07e-08!98;UBERON:0009569!1.65e-08!66;UBERON:0000466!1.04e-07!79;UBERON:0000945!5.21e-07!16;UBERON:0010039!5.21e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.57e-14,90;UBERON:0005177,3.36e-13,79;UBERON:0002369,6.63e-10,7;UBERON:0006858,6.63e-10,7;UBERON:0009569,4.37e-09,66;UBERON:0005178,6.03e-08,17;UBERON:0005181,6.03e-08,17;UBERON:0002224,6.03e-08,17;UBERON:0000915,6.03e-08,17;UBERON:0008947,6.03e-08,17;UBERON:0003258,6.03e-08,17;UBERON:0002075,4.35e-07,19;UBERON:0003126,5.93e-07,3;UBERON:0001005,5.93e-07,3;UBERON:0007196,5.93e-07,3;UBERON:0001558,5.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.607425802169478,0,0.315462165358238,0.274228867211478,0,0.17008658030214,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.2269355667419,22.6587249911902,24.0820922227947,34.7056577938298,38.9335926426314,31.0726625939938,0,0.202753862439029,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,3.46385665617943,3.04031838570118,2.52762222507392,0.22836775943812,0,1.33597925158342,0.346970653532272,1.52232739156071,3.45923245884088,3.61734337326294,3.76283862834255,1.50799909595611,0,0.86759614151947,3.5384422077995,0.323533699894818,2.65009822152472,0.484875253135222,0,0,0,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,2.36373244159177,0.252722758433675,0,0,0,0.720248519221397,0.753524089178575,1.15662048557257,0.640568601424249,0.749613796477831,0.517406741478031,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0.414251545071004,0.938104239924385,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0.492502392237286,0.486412857275134,0.730999937126662,0.658650345873152,2.54992195644706,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0,0.420814919341911,0.252946148497029,0.147610147979602,0.31399745568275,0.616985819609003,0,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,1.2731292589071,1.72617682470486,0.324270453550071,0.274561413188081,2.87536413054709,0,0,0,0,0,0.923765950833023,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0.780534591431195,2.20689201748667,1.55025282754142,1.2756381492599,1.96635977658886,1.72684981865896,3.7608755231193,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,2.6968616189571,0,0.488660878060728,1.48473110675282,2.65490276679926,0,0,0.377210159511796,0,0,0.516856586336442,3.27180356529755,1.78248689192361,3.16036757935816,5.27093042874994,5.15677716240934,5.44703369206061,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0,0.238744688006273,0.164140899745061,0,0,0.512612642393558,0.82554747185289,2.40752885580625,1.13021074202815,1.50363650493128,0.686334519619568,0.849892149969277,0.979660166265606,0.690999869022119,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,1.67270636811575,0.218362563746178,1.21377911746339,0.661227645802687,0.785267825952089,0.259229946583586,0,0,0.448549638131936,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.821500670520278,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0.375364950902364,1.28206136987086,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.37456602987953,0.0640251524048693,0.287177344778066,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.429742108096597,0,0.661774257358546,1.15933917810211 | |||
|short_description=p2@Ifrd1 | |||
}} |
Latest revision as of 14:50, 26 September 2015
Short description: | p2@Ifrd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ifrd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 11bp_to_ENSMUST00000169926_5end |
EntrezGene: | Ifrd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.93e-07 | 3 |
epithelial cell of tracheobronchial tree | 5.93e-07 | 3 |
branched duct epithelial cell | 5.93e-07 | 3 |
epithelial cell of lower respiratory tract | 5.93e-07 | 3 |
respiratory epithelial cell | 5.93e-07 | 3 |
tracheal epithelial cell | 5.93e-07 | 3 |
tracheoblast | 5.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.57e-14 | 90 |
trunk region element | 3.36e-13 | 79 |
adrenal gland | 6.63e-10 | 7 |
adrenal/interrenal gland | 6.63e-10 | 7 |
subdivision of trunk | 4.37e-09 | 66 |
thoracic cavity element | 6.03e-08 | 17 |
thoracic segment organ | 6.03e-08 | 17 |
thoracic cavity | 6.03e-08 | 17 |
thoracic segment of trunk | 6.03e-08 | 17 |
respiratory primordium | 6.03e-08 | 17 |
endoderm of foregut | 6.03e-08 | 17 |
viscus | 4.35e-07 | 19 |
trachea | 5.93e-07 | 3 |
respiratory airway | 5.93e-07 | 3 |
tracheobronchial tree | 5.93e-07 | 3 |
lower respiratory tract | 5.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.85e-08 | 3 |
muscle cancer | 7.85e-08 | 3 |