FFCP PHASE1:Mm9::chr9:58335980..58335983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319477 | |EntrezGene=319477 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CD60 | |UniProt=Q8CD60 | ||
|association_with_transcript=-426bp_to_NM_176921,uc009pwz.1_5end | |association_with_transcript=-426bp_to_NM_176921,uc009pwz.1_5end | ||
|cluster_id=chr9:58335980..58335983,+ | |||
|description=CAGE_peak_8_at_6030419C18Rik_5end | |description=CAGE_peak_8_at_6030419C18Rik_5end | ||
|id=chr9:58335980..58335983,+ | |id=chr9:58335980..58335983,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.34e-08,3;CL:0002610,1.88e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.78e-10!75;UBERON:0001016!2.78e-10!75;UBERON:0001017!3.30e-09!73;UBERON:0005743!3.30e-09!73;UBERON:0004121!2.45e-08!102;UBERON:0000924!2.45e-08!102;UBERON:0006601!2.45e-08!102;UBERON:0001049!5.02e-08!52;UBERON:0005068!5.02e-08!52;UBERON:0006241!5.02e-08!52;UBERON:0007135!5.02e-08!52;UBERON:0002616!8.01e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.34e-08,3;UBERON:0009663,1.34e-08,3;UBERON:0009661,1.34e-08,3;UBERON:0000125,1.34e-08,3;UBERON:0002308,1.34e-08,3;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0000073,2.91e-07,54;UBERON:0002037,8.08e-07,4;UBERON:0002680,8.08e-07,4;UBERON:0001895,8.08e-07,4;UBERON:0010092,8.08e-07,4;UBERON:0006215,8.08e-07,4;UBERON:0002950,9.17e-07,4;UBERON:0001891,9.17e-07,4;UBERON:0009616,9.17e-07,4;UBERON:0010286,9.17e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0.659058548203415,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,0,0,0,0.285650984403804,0,0,0.191690942036473,0.919218786610021,0,1.14918604276669,0.307213066512487,0.131886287730194,0.274462930807229,0,0.558365998002762,0,1.37518422999129,0.294628585473668,0.427115042397309,0.186399445825301,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,3.56059401582874,0,0,0,0,0.599162557619291,0.915001205637253,0.376963056338593,1.21677024134594,0.511430914660661,0.62336413367868,0.486723789203273,0.305518091550949,0.124406970610093,0,0,0,0,0,0.150704817835715,0.408218994907967,0,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.841159794256509,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.723245292907558,0,0,0,0,0,0.35163505977661,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0,0,0,0,0,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0,0.180938774784468,0.238744688006273,0,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0.68741272937475,0,0,0,0.900642406448441,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0.128050304809739,0.229741875822453,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0,0,0,0,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0.659058548203415,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,0,0,0,0.285650984403804,0,0,0.191690942036473,0.919218786610021,0,1.14918604276669,0.307213066512487,0.131886287730194,0.274462930807229,0,0.558365998002762,0,1.37518422999129,0.294628585473668,0.427115042397309,0.186399445825301,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,3.56059401582874,0,0,0,0,0.599162557619291,0.915001205637253,0.376963056338593,1.21677024134594,0.511430914660661,0.62336413367868,0.486723789203273,0.305518091550949,0.124406970610093,0,0,0,0,0,0.150704817835715,0.408218994907967,0,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.841159794256509,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.723245292907558,0,0,0,0,0,0.35163505977661,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0,0,0,0,0,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0,0.180938774784468,0.238744688006273,0,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0.68741272937475,0,0,0,0.900642406448441,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0.128050304809739,0.229741875822453,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0,0,0,0,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p8@6030419C18Rik | |short_description=p8@6030419C18Rik | ||
}} | }} |
Latest revision as of 22:18, 26 September 2015
Short description: | p8@6030419C18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_6030419C18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -426bp_to_NM_176921, uc009pwz.1_5end |
EntrezGene: | 6030419C18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.34e-08 | 3 |
raphe nuclei neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.34e-08 | 3 |
telencephalic nucleus | 1.34e-08 | 3 |
midbrain nucleus | 1.34e-08 | 3 |
neural nucleus | 1.34e-08 | 3 |
nucleus of brain | 1.34e-08 | 3 |
raphe nuclei | 1.88e-08 | 3 |
reticular formation | 1.88e-08 | 3 |
regional part of nervous system | 2.91e-07 | 54 |
cerebellum | 8.08e-07 | 4 |
regional part of metencephalon | 8.08e-07 | 4 |
metencephalon | 8.08e-07 | 4 |
future metencephalon | 8.08e-07 | 4 |
rhombic lip | 8.08e-07 | 4 |
regional part of midbrain | 9.17e-07 | 4 |
midbrain | 9.17e-07 | 4 |
presumptive midbrain | 9.17e-07 | 4 |
midbrain neural tube | 9.17e-07 | 4 |