Personal tools

FFCP PHASE1:Mm9::chr11:115885278..115885291,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:115885278..115885291,-
|DHSsupport=NA
|short_description=p4@Gm12657,p4@Gm6421,p4@Gm6749,p4@Gm7194,p4@Gm7227,p4@H3f3a,p4@H3f3b,p4@H3f3c
|DPIdataset=NA
|description=CAGE_peak_4_at_Gm12657_5end,CAGE_peak_4_at_Gm6421_5end,CAGE_peak_4_at_Gm6749_5end,CAGE_peak_4_at_Gm7194_5end,CAGE_peak_4_at_Gm7227_5end,CAGE_peak_4_at_H3f3a_5end,CAGE_peak_4_at_H3f3b_5end,CAGE_peak_4_at_H3f3c_5end
|association_with_transcript=495bp_to_ENSMUST00000139378_5end
|EntrezGene=15078,15081,623365,625328,627371,636952,638008,667250
|EntrezGene=15078,15081,623365,625328,627371,636952,638008,667250
|HGNC=
|HGNC=
|MCL_coexpression_id=99
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=495bp_to_ENSMUST00000139378_5end
|cluster_id=chr11:115885278..115885291,-
|description=CAGE_peak_4_at_Gm12657_5end,CAGE_peak_4_at_Gm6421_5end,CAGE_peak_4_at_Gm6749_5end,CAGE_peak_4_at_Gm7194_5end,CAGE_peak_4_at_Gm7227_5end,CAGE_peak_4_at_H3f3a_5end,CAGE_peak_4_at_H3f3b_5end,CAGE_peak_4_at_H3f3c_5end
|id=chr11:115885278..115885291,-
|ontology_enrichment_celltype=CL:0000034!2.01e-07!97
|ontology_enrichment_celltype_v019_2=CL:0000034,5.58e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,0.671517087647559,0.934450562382103,0.387369970324729,1.83025338797167,0.936258105287974,0.68487187290202,0.398860794976682,0.513602189793617,0.611942816932982,2.33176833270964,0.404950534779652,3.49780939064073,1.10411757875383,1.09691546884591,0.42438965179803,0.850432901510698,0.595745707205312,0.261199789138935,0.799962113967033,0.45881856213434,0,0,0.430942465371778,0.950117097281869,0.504060259519861,1.33038306393183,1.90509202037889,0,0,0.577703239502549,0.166234645358492,0.204169356262369,2.09265815368454,0.7813353445238,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,1.38486499773135,1.72340783073175,0.734187008646726,1.56478268869608,0.436050312760893,0.659058548203415,0.58328969722285,0.419959264876088,0,1.00669563634642,1.45072428402269,1.00828139742739,0.514518872071894,0.573066879877513,1.03134418455488,2.02316460859598,2.64495489636016,0.633831403506179,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0,0.898800331555214,2.30530983192933,1.65903379693564,2.97013064329719,1.68259969081106,0.285650984403804,0.662605622854841,0.244981598429908,1.24599112323707,0.919218786610021,0,0.127687338085188,0.46081959976873,0.791317726381163,1.55528994124096,2.08365348222704,0.558365998002762,0,0.30559649555362,0.883885756421003,0.569486723196412,1.3047961207771,0.302904773332736,0.151143120213571,4.92769630792852,0.860423876981386,21.0791113449403,2.15881276655127,0,0.448026887097336,0.702222100658759,0,0.519572009205738,1.06001872353102,0.422530259330042,1.28326477414318,0,0,1.29894624606728,3.29367825117628,2.52762222507392,1.25602267690966,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0.452167921657868,0.823120949949934,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,7.33063473847093,3.0654846625031,2.99537811264801,1.19980546198682,1.65191295194984,0,0,0.251308704225729,0,0,0,0,1.52759045775474,0.746441823660558,0,0,1.56144531555244,0.689706313300419,0.360124259610698,0.150704817835715,0.748401490664606,0.640568601424249,1.12442069471675,0,1.07783996466421,0.756424320671277,0.703804496655795,2.41115305670332,1.39023624612799,0.696504333044333,0,1.19420560091096,1.40442637462647,2.05878325691772,1.42081749697796,0.414251545071004,0,0.720248245844059,0.710234206755631,0,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0,0.146199987425332,0.439100230582101,0,0,0.205809224758569,0.330418782983798,0.528901133327089,0.426576501070468,0.232236671860439,0.515469845288373,0.201683524623343,0.667134131534611,0,2.37264530772256,0.658795818896044,0.502670417600539,0.397912944082302,1.55971269695296,2.69645822596266,1.94524244887225,0.597423819763102,1.70701110857774,0.114248512609729,1.1270773567308,0.407302655690628,0.969762435838129,1.40271639780637,0.189709611372772,0,0,0.370191491765402,0,0.333690211432188,0.393117990226406,0.674586337154561,0,0.241177159752417,0.50925170356284,0.287696137450811,9.72811360650212,1.37280706594041,2.87536413054709,1.11642284300551,0.312037673114561,0.757736633841335,0,1.4473305640901,0.369506380333209,1.51593129416388,0.325929952884052,0,0.234690248288502,0.167506257441816,0.714130922658041,1.36593553500459,0.630540576424764,0.664394068946325,0.637819074629948,0.327726629431476,0.345369963731791,0.867894351489069,3.01582567878545,0.54390568381871,0.983528546038072,0.551873492609465,0.321101179975584,0.117211686592203,0.983609672260053,0.757412781613119,1.57754109708128,3.12350995437311,1.29254038639679,0.716906393857656,1.11399337041197,0.849229592366497,1.61924280669958,2.63030272120181,2.37172666767914,0,0.709700426041343,1.24645922567079,1.14020871547503,0.329940245945071,5.30980553359851,0.728341908464944,0.604647113929502,0.565815239267694,0,0.307435147943927,0.516856586336442,2.54473610634254,1.78248689192361,1.26414703174326,0,1.03135543248187,0,1.62054984628179,1.94038025674132,0.857348140126369,0.709360934569094,0.713475270408282,0.493647061806363,1.2178597964584,0,0.42366414172764,0.441056796109924,0.32977250588296,0.807322133479528,0.422190474497091,0.596861720015682,0.328281799490123,3.78925087618806,0,1.53783792718067,1.03193433981611,0.925972636848558,0.565105371014073,0.956859594047176,0.915112692826091,1.18984900995699,1.95932033253121,1.10559979043539,1.90934123603023,0.790839983952838,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.944050424693745,0.661227645802687,0.785267825952089,1.42576470620972,0.621339313086926,2.25477175473676,1.49516546043979,1.65458490457098,0.583353565032143,0.387479470433193,1.18269287843545,2.8165737274981,0.13020438484395,1.46803082195995,1.20792060413003,1.72818003754719,3.16011120628178,0.608175645870493,0.513554785824136,0.77952493786677,0.358053391334963,0.596044064343795,1.20195449519969,1.18151621739662,1.31256384932592,0.990688486514998,0.604957110821043,1.46186821109629,0.962118416403295,1.98690733708667,0.453460767230423,1.99787358036658,0.807424709485281,0.503653849092235,0.19318959403219,0.563047426353546,0.915758121336325,0.643105137237198,2.50786052017682,0,0.460325236507177,0,0.343706364687375,0,0,1.35004500046361,0,0.453142408984205,0,0.31136204275253,1.99512436700516,0.853668028770671,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0,0,0.565879024158229,0.37456602987953,0.128050304809739,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,1.12228454331548,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0.467863216890817,1.50409737833809,0.956441660344217,1.10295709559758,0
|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,0.671517087647559,0.934450562382103,0.387369970324729,1.83025338797167,0.936258105287974,0.68487187290202,0.398860794976682,0.513602189793617,0.611942816932982,2.33176833270964,0.404950534779652,3.49780939064073,1.10411757875383,1.09691546884591,0.42438965179803,0.850432901510698,0.595745707205312,0.261199789138935,0.799962113967033,0.45881856213434,0,0,0.430942465371778,0.950117097281869,0.504060259519861,1.33038306393183,1.90509202037889,0,0,0.577703239502549,0.166234645358492,0.204169356262369,2.09265815368454,0.7813353445238,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,1.38486499773135,1.72340783073175,0.734187008646726,1.56478268869608,0.436050312760893,0.659058548203415,0.58328969722285,0.419959264876088,0,1.00669563634642,1.45072428402269,1.00828139742739,0.514518872071894,0.573066879877513,1.03134418455488,2.02316460859598,2.64495489636016,0.633831403506179,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0,0.898800331555214,2.30530983192933,1.65903379693564,2.97013064329719,1.68259969081106,0.285650984403804,0.662605622854841,0.244981598429908,1.24599112323707,0.919218786610021,0,0.127687338085188,0.46081959976873,0.791317726381163,1.55528994124096,2.08365348222704,0.558365998002762,0,0.30559649555362,0.883885756421003,0.569486723196412,1.3047961207771,0.302904773332736,0.151143120213571,4.92769630792852,0.860423876981386,21.0791113449403,2.15881276655127,0,0.448026887097336,0.702222100658759,0,0.519572009205738,1.06001872353102,0.422530259330042,1.28326477414318,0,0,1.29894624606728,3.29367825117628,2.52762222507392,1.25602267690966,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0.452167921657868,0.823120949949934,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,7.33063473847093,3.0654846625031,2.99537811264801,1.19980546198682,1.65191295194984,0,0,0.251308704225729,0,0,0,0,1.52759045775474,0.746441823660558,0,0,1.56144531555244,0.689706313300419,0.360124259610698,0.150704817835715,0.748401490664606,0.640568601424249,1.12442069471675,0,1.07783996466421,0.756424320671277,0.703804496655795,2.41115305670332,1.39023624612799,0.696504333044333,0,1.19420560091096,1.40442637462647,2.05878325691772,1.42081749697796,0.414251545071004,0,0.720248245844059,0.710234206755631,0,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0,0.146199987425332,0.439100230582101,0,0,0.205809224758569,0.330418782983798,0.528901133327089,0.426576501070468,0.232236671860439,0.515469845288373,0.201683524623343,0.667134131534611,0,2.37264530772256,0.658795818896044,0.502670417600539,0.397912944082302,1.55971269695296,2.69645822596266,1.94524244887225,0.597423819763102,1.70701110857774,0.114248512609729,1.1270773567308,0.407302655690628,0.969762435838129,1.40271639780637,0.189709611372772,0,0,0.370191491765402,0,0.333690211432188,0.393117990226406,0.674586337154561,0,0.241177159752417,0.50925170356284,0.287696137450811,9.72811360650212,1.37280706594041,2.87536413054709,1.11642284300551,0.312037673114561,0.757736633841335,0,1.4473305640901,0.369506380333209,1.51593129416388,0.325929952884052,0,0.234690248288502,0.167506257441816,0.714130922658041,1.36593553500459,0.630540576424764,0.664394068946325,0.637819074629948,0.327726629431476,0.345369963731791,0.867894351489069,3.01582567878545,0.54390568381871,0.983528546038072,0.551873492609465,0.321101179975584,0.117211686592203,0.983609672260053,0.757412781613119,1.57754109708128,3.12350995437311,1.29254038639679,0.716906393857656,1.11399337041197,0.849229592366497,1.61924280669958,2.63030272120181,2.37172666767914,0,0.709700426041343,1.24645922567079,1.14020871547503,0.329940245945071,5.30980553359851,0.728341908464944,0.604647113929502,0.565815239267694,0,0.307435147943927,0.516856586336442,2.54473610634254,1.78248689192361,1.26414703174326,0,1.03135543248187,0,1.62054984628179,1.94038025674132,0.857348140126369,0.709360934569094,0.713475270408282,0.493647061806363,1.2178597964584,0,0.42366414172764,0.441056796109924,0.32977250588296,0.807322133479528,0.422190474497091,0.596861720015682,0.328281799490123,3.78925087618806,0,1.53783792718067,1.03193433981611,0.925972636848558,0.565105371014073,0.956859594047176,0.915112692826091,1.18984900995699,1.95932033253121,1.10559979043539,1.90934123603023,0.790839983952838,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.944050424693745,0.661227645802687,0.785267825952089,1.42576470620972,0.621339313086926,2.25477175473676,1.49516546043979,1.65458490457098,0.583353565032143,0.387479470433193,1.18269287843545,2.8165737274981,0.13020438484395,1.46803082195995,1.20792060413003,1.72818003754719,3.16011120628178,0.608175645870493,0.513554785824136,0.77952493786677,0.358053391334963,0.596044064343795,1.20195449519969,1.18151621739662,1.31256384932592,0.990688486514998,0.604957110821043,1.46186821109629,0.962118416403295,1.98690733708667,0.453460767230423,1.99787358036658,0.807424709485281,0.503653849092235,0.19318959403219,0.563047426353546,0.915758121336325,0.643105137237198,2.50786052017682,0,0.460325236507177,0,0.343706364687375,0,0,1.35004500046361,0,0.453142408984205,0,0.31136204275253,1.99512436700516,0.853668028770671,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0,0,0.565879024158229,0.37456602987953,0.128050304809739,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,1.12228454331548,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0.467863216890817,1.50409737833809,0.956441660344217,1.10295709559758,0
|short_description=p4@Gm12657,p4@Gm6421,p4@Gm6749,p4@Gm7194,p4@Gm7227,p4@H3f3a,p4@H3f3b,p4@H3f3c
}}
}}

Latest revision as of 23:43, 26 September 2015

Short description:p4@Gm12657, p4@Gm6421, p4@Gm6749, p4@Gm7194, p4@Gm7227, p4@H3f3a, p4@H3f3b, p4@H3f3c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gm12657_5end, CAGE_peak_4_at_Gm6421_5end, CAGE_peak_4_at_Gm6749_5end, CAGE_peak_4_at_Gm7194_5end, CAGE_peak_4_at_Gm7227_5end, CAGE_peak_4_at_H3f3a_5end, CAGE_peak_4_at_H3f3b_5end, CAGE_peak_4_at_H3f3c_5end
Coexpression cluster:MCL_coexpression_mm9:99
Association with transcript: 495bp_to_ENSMUST00000139378_5end
EntrezGene:15078,15081,623365,625328,627371,636952,638008,667250
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Gm12657p4@Gm6421p4@Gm6749p4@Gm7194p4@Gm7227p4@H3f3ap4@H3f3bp4@H3f3c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
stem cell5.58e-0797
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:115885278..115885291,-&oldid=4280890"