FFCP PHASE1:Mm9::chr12:91051365..91051370,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100505240,18191 | |EntrezGene=100505240,18191 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |MCL_coexpression_id=42 | ||
|TSSclassifier=NA | |||
|UniProt=Q8C985,E9Q3Q4 | |UniProt=Q8C985,E9Q3Q4 | ||
|association_with_transcript=442bp_to_ENSMUST00000110130,ENSMUST00000110133,ENSMUST00000170784,uc007oke.1_5end | |association_with_transcript=442bp_to_ENSMUST00000110130,ENSMUST00000110133,ENSMUST00000170784,uc007oke.1_5end | ||
|cluster_id=chr12:91051365..91051370,+ | |||
|description=CAGE_peak_44_at_LOC100505240_5end,CAGE_peak_46_at_Nrxn3_5end | |description=CAGE_peak_44_at_LOC100505240_5end,CAGE_peak_46_at_Nrxn3_5end | ||
|id=chr12:91051365..91051370,+ | |id=chr12:91051365..91051370,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.42e-11!73;UBERON:0005743!1.42e-11!73;UBERON:0000073!2.99e-11!75;UBERON:0001016!2.99e-11!75;UBERON:0002616!4.39e-11!49;UBERON:0000955!7.46e-11!50;UBERON:0006238!7.46e-11!50;UBERON:0001049!1.73e-10!52;UBERON:0005068!1.73e-10!52;UBERON:0006241!1.73e-10!52;UBERON:0007135!1.73e-10!52;UBERON:0002037!4.61e-10!4;UBERON:0002680!4.61e-10!4;UBERON:0001895!4.61e-10!4;UBERON:0010092!4.61e-10!4;UBERON:0006215!4.61e-10!4;UBERON:0000033!1.60e-08!63;UBERON:0001894!1.98e-08!10;UBERON:0006222!1.98e-08!10;UBERON:0004121!4.06e-08!102;UBERON:0000924!4.06e-08!102;UBERON:0006601!4.06e-08!102;UBERON:0002346!1.49e-07!71;UBERON:0003075!1.49e-07!71;UBERON:0007284!1.49e-07!71;UBERON:0003076!2.14e-07!12;UBERON:0003057!2.14e-07!12;UBERON:0004733!5.34e-07!6;UBERON:0004732!5.34e-07!6;UBERON:0002028!5.34e-07!6;UBERON:0007277!5.34e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!1.42e-11!73;UBERON:0005743!1.42e-11!73;UBERON:0000073!2.99e-11!75;UBERON:0001016!2.99e-11!75;UBERON:0002616!4.39e-11!49;UBERON:0000955!7.46e-11!50;UBERON:0006238!7.46e-11!50;UBERON:0001049!1.73e-10!52;UBERON:0005068!1.73e-10!52;UBERON:0006241!1.73e-10!52;UBERON:0007135!1.73e-10!52;UBERON:0002037!4.61e-10!4;UBERON:0002680!4.61e-10!4;UBERON:0001895!4.61e-10!4;UBERON:0010092!4.61e-10!4;UBERON:0006215!4.61e-10!4;UBERON:0000033!1.60e-08!63;UBERON:0001894!1.98e-08!10;UBERON:0006222!1.98e-08!10;UBERON:0004121!4.06e-08!102;UBERON:0000924!4.06e-08!102;UBERON:0006601!4.06e-08!102;UBERON:0002346!1.49e-07!71;UBERON:0003075!1.49e-07!71;UBERON:0007284!1.49e-07!71;UBERON:0003076!2.14e-07!12;UBERON:0003057!2.14e-07!12;UBERON:0004733!5.34e-07!6;UBERON:0004732!5.34e-07!6;UBERON:0002028!5.34e-07!6;UBERON:0007277!5.34e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.52e-23,4;UBERON:0002680,6.52e-23,4;UBERON:0001895,6.52e-23,4;UBERON:0010092,6.52e-23,4;UBERON:0006215,6.52e-23,4;UBERON:0004733,8.02e-16,6;UBERON:0004732,8.02e-16,6;UBERON:0002028,8.02e-16,6;UBERON:0007277,8.02e-16,6;UBERON:0003076,1.13e-08,12;UBERON:0003057,1.13e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,3.77004072264219,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,3.77004072264219,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p44@LOC100505240,p46@Nrxn3 | |short_description=p44@LOC100505240,p46@Nrxn3 | ||
}} | }} |
Latest revision as of 23:57, 26 September 2015
Short description: | p44@LOC100505240, p46@Nrxn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_44_at_LOC100505240_5end, CAGE_peak_46_at_Nrxn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 442bp_to_ENSMUST00000110130, ENSMUST00000110133, ENSMUST00000170784, uc007oke.1_5end |
EntrezGene: | 100505240,18191 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.52e-23 | 4 |
regional part of metencephalon | 6.52e-23 | 4 |
metencephalon | 6.52e-23 | 4 |
future metencephalon | 6.52e-23 | 4 |
rhombic lip | 6.52e-23 | 4 |
segmental subdivision of hindbrain | 8.02e-16 | 6 |
segmental subdivision of nervous system | 8.02e-16 | 6 |
hindbrain | 8.02e-16 | 6 |
presumptive hindbrain | 8.02e-16 | 6 |
posterior neural tube | 1.13e-08 | 12 |
chordal neural plate | 1.13e-08 | 12 |