FFCP PHASE1:Mm9::chr18:10610046..10610114,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77805 | |EntrezGene=77805 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=317 | |||
|TSSclassifier=NA | |||
|UniProt=Q69Z69 | |UniProt=Q69Z69 | ||
|association_with_transcript=0bp_to_ENSMUST00000115864,ENSMUST00000145320_5end | |association_with_transcript=0bp_to_ENSMUST00000115864,ENSMUST00000145320_5end | ||
|cluster_id=chr18:10610046..10610114,- | |||
|description=CAGE_peak_1_at_Esco1_5end | |description=CAGE_peak_1_at_Esco1_5end | ||
|id=chr18:10610046..10610114,- | |id=chr18:10610046..10610114,- | ||
|ontology_enrichment_celltype=CL:0000838!2.97e-07!12;CL:0000791!6.12e-07!9;CL:0000789!6.12e-07!9;CL:0002420!6.12e-07!9;CL:0002419!6.12e-07!9;CL:0000790!6.12e-07!9 | |ontology_enrichment_celltype=CL:0000838!2.97e-07!12;CL:0000791!6.12e-07!9;CL:0000789!6.12e-07!9;CL:0002420!6.12e-07!9;CL:0002419!6.12e-07!9;CL:0000790!6.12e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.97e-07,12;CL:0000791,6.12e-07,9;CL:0000789,6.12e-07,9;CL:0002420,6.12e-07,9;CL:0002419,6.12e-07,9;CL:0000790,6.12e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-11!51;UBERON:0004119!1.02e-10!130;UBERON:0000925!1.02e-10!130;UBERON:0006595!1.02e-10!130;UBERON:0001007!5.59e-10!128;UBERON:0001555!5.59e-10!128;UBERON:0007026!5.59e-10!128;UBERON:0004921!8.16e-10!126;UBERON:0004185!8.16e-10!126 | |ontology_enrichment_uberon=UBERON:0007023!2.08e-11!51;UBERON:0004119!1.02e-10!130;UBERON:0000925!1.02e-10!130;UBERON:0006595!1.02e-10!130;UBERON:0001007!5.59e-10!128;UBERON:0001555!5.59e-10!128;UBERON:0007026!5.59e-10!128;UBERON:0004921!8.16e-10!126;UBERON:0004185!8.16e-10!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.08e-11,51;UBERON:0004119,1.15e-09,118;UBERON:0000925,1.15e-09,118;UBERON:0006595,1.15e-09,118;UBERON:0001007,5.82e-09,116;UBERON:0001555,5.82e-09,116;UBERON:0007026,5.82e-09,116;UBERON:0004921,8.24e-09,114;UBERON:0000077,2.11e-08,35 | |||
|phase1_expression=16.9757777931082,27.2200817958702,24.1149596876454,39.0178832585811,38.5689712058687,24.8461322429597,21.0251376535973,70.6304579225422,59.4128407480034,69.7512288439541,29.6207085030124,30.3134204182278,69.3362956221383,69.4117995206839,17.6548173762301,21.8673288781012,8.39474253753776,52.0512572841092,68.6943312364751,36.0731204028326,15.3077922271926,19.7588992889762,18.0227854505865,19.8390604263824,16.9762867989706,21.8208146363708,25.4149577733854,19.39241094173,24.7030445293286,22.1786514188739,17.9601713630797,10.1604907753541,3.69038872550742,0,9.82095507154334,11.470190529736,13.8835162258411,68.220655810116,47.6614560159518,55.4935168612226,67.6466211235666,62.1571391312186,70.3990011895173,10.7012295279241,9.0225468785368,8.62669735159903,0.782391344348039,1.74420125104357,1.5378032791413,2.52758868796568,1.25987779462826,0,73.1532162411731,80.5151977632592,71.2518854182024,10.2903774414379,8.88253663810146,8.25075347643908,4.04632921719196,1.5869729378161,1.90149421051854,1.69422266034566,0,2.2497492932035,3.9554654502679,2.1314403448383,1.79760066311043,1.53687322128622,4.25127410464758,1.21505344498522,3.15487442027073,3.42781181284564,2.65042249141936,4.04219637409348,2.58782771749238,3.67687514644008,6.60695285996332,10.0872997087298,10.752457327937,3.29715719325485,4.48289453651807,6.25096044668112,7.2587579740359,6.19038871034848,13.4462458043593,7.66034322231536,7.97281412474976,4.10078780815661,9.76867893998074,10.3533037346296,36.8127900651131,10.3250865237766,12.2394840067395,8.63525106620507,14.9448576012964,21.5052905806721,18.117330196996,10.7371103224176,6.75443611967459,5.3000936176551,14.9294024963281,5.13305909657271,7.64415719119937,7.11066703153331,17.7522653629196,13.1747130047051,13.1436355703844,24.0927986207217,111.861165735578,18.8521516612327,5.72501578328248,7.61163695780353,8.99400439298628,12.8114244469729,17.4031286560843,13.8233250462643,30.8993709667967,23.5696951779456,24.7690954545965,15.6913844448987,14.7963817368464,13.091631834651,44.7340226923493,25.7647101370161,17.5935233723302,24.0129631896076,15.4561510612637,10.1983464268879,13.723584523891,18.574039286198,26.0775343606617,13.0680526197379,17.2086076990354,17.3886510984625,12.6750707181332,17.5220564113178,11.3041693873851,20.9003710624956,29.0631172198726,28.1992086887875,8.19758790665033,7.12696523743766,11.5239763075424,13.4127287873786,13.2671173345089,16.2704424761759,16.9600121453109,35.9597685327232,3.66465587985832,11.535470890237,10.5570674498369,6.57587197282724,13.0682207136031,19.1538691587192,17.6972637310831,10.3497818745616,8.42655824775882,17.7570055909153,12.2190304740105,8.07790512888457,11.0227248191115,10.9837857491219,10.6535131013345,11.215561209602,12.0328348052155,12.7893669612724,8.58474884478781,14.9459638229977,12.341988743511,18.0584210487005,21.5643033391976,17.3977985036145,20.4181607220677,19.7283435577747,22.0804445992334,16.0531195311684,35.6852285622502,23.5361004330554,8.74481827194459,9.28946687441754,13.4022159774977,15.9329984452441,18.2349995952794,16.5496294717926,26.5736274464927,18.6109818838132,24.8821856712267,22.2831248686089,25.1503672383665,26.0657628509724,27.8818084338356,19.9141273254367,1.13800740571849,11.9960938240215,9.01661885384643,15.8848035719345,15.5161989734101,16.4117818543345,18.6547784516559,22.1415221969403,21.5088257142683,15.0544539984597,20.1587786419261,15.5165948315967,12.579775687245,15.5154857545549,16.6345299538572,14.2294524253926,14.0044218479781,14.3848068725405,20.4290385736545,10.7078951143352,20.1275489138296,14.8856379067401,20.2824487524464,16.9227848224565,14.7105879087968,16.8855232477179,29.7452636168234,6.44270800019648,9.28900365719548,8.31750920298422,12.4385831592906,16.5831194867398,23.0902331659433,24.7819732779405,20.0196633014863,17.0527811029557,15.4671125597762,24.9072238367922,23.3124725518959,19.238324791341,16.5870412333199,10.3342079925555,27.538799289066,34.2161565417868,14.4495530989013,13.7137673312878,5.57378814280696,17.6729649043061,9.4652465824877,10.5418460960092,8.18608911384636,7.40803273652911,11.8083297263669,12.4553673547086,7.69140333182299,9.9366991689846,14.6256477840214,21.5285282002611,19.7296718439493,5.69809931735217,9.77321756121457,20.6212653715669,29.2039304347918,7.76898035695941,9.37203026590728,21.5009790921724,8.85905678642318,22.4427657999067,19.1236936944484,22.9026249570828,17.4683715408513,29.0753817300951,25.3004660579997,27.8465966770104,24.8520912200265,8.46287141947158,1.81102157295856,12.0028739617692,21.4581682707151,10.167022603318,13.9866667511803,3.34911444026059,27.2219181353904,36.4351161885771,27.1249929607603,33.4719093471204,29.3865256586548,26.1154964938915,25.1875645846618,30.5302073525814,27.9821603164657,13.3506217447567,32.465467351592,10.5257302661243,19.8158144285592,18.8368457004691,31.7130608312778,19.4461447225544,23.7969801991397,30.3694651542338,25.1523952324051,15.2747298882418,8.22473583310952,14.84232110026,15.0127423742304,16.09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| |phase1_expression=16.9757777931082,27.2200817958702,24.1149596876454,39.0178832585811,38.5689712058687,24.8461322429597,21.0251376535973,70.6304579225422,59.4128407480034,69.7512288439541,29.6207085030124,30.3134204182278,69.3362956221383,69.4117995206839,17.6548173762301,21.8673288781012,8.39474253753776,52.0512572841092,68.6943312364751,36.0731204028326,15.3077922271926,19.7588992889762,18.0227854505865,19.8390604263824,16.9762867989706,21.8208146363708,25.4149577733854,19.39241094173,24.7030445293286,22.1786514188739,17.9601713630797,10.1604907753541,3.69038872550742,0,9.82095507154334,11.470190529736,13.8835162258411,68.220655810116,47.6614560159518,55.4935168612226,67.6466211235666,62.1571391312186,70.3990011895173,10.7012295279241,9.0225468785368,8.62669735159903,0.782391344348039,1.74420125104357,1.5378032791413,2.52758868796568,1.25987779462826,0,73.1532162411731,80.5151977632592,71.2518854182024,10.2903774414379,8.88253663810146,8.25075347643908,4.04632921719196,1.5869729378161,1.90149421051854,1.69422266034566,0,2.2497492932035,3.9554654502679,2.1314403448383,1.79760066311043,1.53687322128622,4.25127410464758,1.21505344498522,3.15487442027073,3.42781181284564,2.65042249141936,4.04219637409348,2.58782771749238,3.67687514644008,6.60695285996332,10.0872997087298,10.752457327937,3.29715719325485,4.48289453651807,6.25096044668112,7.2587579740359,6.19038871034848,13.4462458043593,7.66034322231536,7.97281412474976,4.10078780815661,9.76867893998074,10.3533037346296,36.8127900651131,10.3250865237766,12.2394840067395,8.63525106620507,14.9448576012964,21.5052905806721,18.117330196996,10.7371103224176,6.75443611967459,5.3000936176551,14.9294024963281,5.13305909657271,7.64415719119937,7.11066703153331,17.7522653629196,13.1747130047051,13.1436355703844,24.0927986207217,111.861165735578,18.8521516612327,5.72501578328248,7.61163695780353,8.99400439298628,12.8114244469729,17.4031286560843,13.8233250462643,30.8993709667967,23.5696951779456,24.7690954545965,15.6913844448987,14.7963817368464,13.091631834651,44.7340226923493,25.7647101370161,17.5935233723302,24.0129631896076,15.4561510612637,10.1983464268879,13.723584523891,18.574039286198,26.0775343606617,13.0680526197379,17.2086076990354,17.3886510984625,12.6750707181332,17.5220564113178,11.3041693873851,20.9003710624956,29.0631172198726,28.1992086887875,8.19758790665033,7.12696523743766,11.5239763075424,13.4127287873786,13.2671173345089,16.2704424761759,16.9600121453109,35.9597685327232,3.66465587985832,11.535470890237,10.5570674498369,6.57587197282724,13.0682207136031,19.1538691587192,17.6972637310831,10.3497818745616,8.42655824775882,17.7570055909153,12.2190304740105,8.07790512888457,11.0227248191115,10.9837857491219,10.6535131013345,11.215561209602,12.0328348052155,12.7893669612724,8.58474884478781,14.9459638229977,12.341988743511,18.0584210487005,21.5643033391976,17.3977985036145,20.4181607220677,19.7283435577747,22.0804445992334,16.0531195311684,35.6852285622502,23.5361004330554,8.74481827194459,9.28946687441754,13.4022159774977,15.9329984452441,18.2349995952794,16.5496294717926,26.5736274464927,18.6109818838132,24.8821856712267,22.2831248686089,25.1503672383665,26.0657628509724,27.8818084338356,19.9141273254367,1.13800740571849,11.9960938240215,9.01661885384643,15.8848035719345,15.5161989734101,16.4117818543345,18.6547784516559,22.1415221969403,21.5088257142683,15.0544539984597,20.1587786419261,15.5165948315967,12.579775687245,15.5154857545549,16.6345299538572,14.2294524253926,14.0044218479781,14.3848068725405,20.4290385736545,10.7078951143352,20.1275489138296,14.8856379067401,20.2824487524464,16.9227848224565,14.7105879087968,16.8855232477179,29.7452636168234,6.44270800019648,9.28900365719548,8.31750920298422,12.4385831592906,16.5831194867398,23.0902331659433,24.7819732779405,20.0196633014863,17.0527811029557,15.4671125597762,24.9072238367922,23.3124725518959,19.238324791341,16.5870412333199,10.3342079925555,27.538799289066,34.2161565417868,14.4495530989013,13.7137673312878,5.57378814280696,17.6729649043061,9.4652465824877,10.5418460960092,8.18608911384636,7.40803273652911,11.8083297263669,12.4553673547086,7.69140333182299,9.9366991689846,14.6256477840214,21.5285282002611,19.7296718439493,5.69809931735217,9.77321756121457,20.6212653715669,29.2039304347918,7.76898035695941,9.37203026590728,21.5009790921724,8.85905678642318,22.4427657999067,19.1236936944484,22.9026249570828,17.4683715408513,29.0753817300951,25.3004660579997,27.8465966770104,24.8520912200265,8.46287141947158,1.81102157295856,12.0028739617692,21.4581682707151,10.167022603318,13.9866667511803,3.34911444026059,27.2219181353904,36.4351161885771,27.1249929607603,33.4719093471204,29.3865256586548,26.1154964938915,25.1875645846618,30.5302073525814,27.9821603164657,13.3506217447567,32.465467351592,10.5257302661243,19.8158144285592,18.8368457004691,31.7130608312778,19.4461447225544,23.7969801991397,30.3694651542338,25.1523952324051,15.2747298882418,8.22473583310952,14.84232110026,15.0127423742304,16.09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| ||
|short_description=p1@Esco1 | |short_description=p1@Esco1 | ||
}} | }} |
Latest revision as of 01:15, 27 September 2015
Short description: | p1@Esco1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Esco1_5end |
Coexpression cluster: | MCL_coexpression_mm9:317 |
Association with transcript: | 0bp_to_ENSMUST00000115864, ENSMUST00000145320_5end |
EntrezGene: | Esco1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.97e-07 | 12 |
mature alpha-beta T cell | 6.12e-07 | 9 |
alpha-beta T cell | 6.12e-07 | 9 |
immature T cell | 6.12e-07 | 9 |
mature T cell | 6.12e-07 | 9 |
immature alpha-beta T cell | 6.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.08e-11 | 51 |
endoderm-derived structure | 1.15e-09 | 118 |
endoderm | 1.15e-09 | 118 |
presumptive endoderm | 1.15e-09 | 118 |
digestive system | 5.82e-09 | 116 |
digestive tract | 5.82e-09 | 116 |
primitive gut | 5.82e-09 | 116 |
subdivision of digestive tract | 8.24e-09 | 114 |
mixed endoderm/mesoderm-derived structure | 2.11e-08 | 35 |