FFCP PHASE1:Mm9::chr6:40578587..40578594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232714 | |EntrezGene=232714 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=B5THE2,Q6XK24 | |UniProt=B5THE2,Q6XK24 | ||
|association_with_transcript=-235bp_to_ENSMUST00000071535,NM_001171003,uc009bnf.2,uc012ekg.1_5end | |association_with_transcript=-235bp_to_ENSMUST00000071535,NM_001171003,uc009bnf.2,uc012ekg.1_5end | ||
|cluster_id=chr6:40578587..40578594,+ | |||
|description=CAGE_peak_4_at_Mgam_5end | |description=CAGE_peak_4_at_Mgam_5end | ||
|id=chr6:40578587..40578594,+ | |id=chr6:40578587..40578594,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.09e-17!9;CL:0002251!3.09e-17!9;CL:0000239!1.72e-10!6;CL:0000677!1.72e-10!6;CL:0000212!1.72e-10!6;CL:0000584!1.72e-10!6;CL:0000066!2.73e-10!25;CL:0002076!8.42e-10!15;CL:0000075!6.05e-09!7;CL:0002250!1.68e-08!3;CL:0000473!3.00e-08!3;CL:0000627!3.00e-08!3;CL:0000682!3.00e-08!3;CL:0000223!5.09e-07!20 | |ontology_enrichment_celltype=CL:0002563!3.09e-17!9;CL:0002251!3.09e-17!9;CL:0000239!1.72e-10!6;CL:0000677!1.72e-10!6;CL:0000212!1.72e-10!6;CL:0000584!1.72e-10!6;CL:0000066!2.73e-10!25;CL:0002076!8.42e-10!15;CL:0000075!6.05e-09!7;CL:0002250!1.68e-08!3;CL:0000473!3.00e-08!3;CL:0000627!3.00e-08!3;CL:0000682!3.00e-08!3;CL:0000223!5.09e-07!20 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.02e-33!43;UBERON:0000344!7.19e-28!15;UBERON:0001242!1.43e-27!13;UBERON:0000060!1.43e-27!13;UBERON:0001262!1.43e-27!13;UBERON:0004786!1.43e-27!13;UBERON:0005409!1.82e-22!59;UBERON:0003350!3.09e-17!9;UBERON:0004808!3.09e-17!9;UBERON:0001277!3.09e-17!9;UBERON:0004923!2.69e-16!24;UBERON:0000485!7.41e-14!11;UBERON:0000331!1.70e-09!3;UBERON:0002116!1.70e-09!3;UBERON:0001204!1.70e-09!3;UBERON:0001168!1.70e-09!3;UBERON:0001007!3.17e-08!128;UBERON:0001555!3.17e-08!128;UBERON:0007026!3.17e-08!128;UBERON:0004119!5.20e-08!130;UBERON:0000925!5.20e-08!130;UBERON:0006595!5.20e-08!130;UBERON:0004921!1.62e-07!126;UBERON:0004185!1.62e-07!126;UBERON:0001155!8.05e-07!2;UBERON:0000059!8.05e-07!2 | |ontology_enrichment_uberon=UBERON:0000160!6.02e-33!43;UBERON:0000344!7.19e-28!15;UBERON:0001242!1.43e-27!13;UBERON:0000060!1.43e-27!13;UBERON:0001262!1.43e-27!13;UBERON:0004786!1.43e-27!13;UBERON:0005409!1.82e-22!59;UBERON:0003350!3.09e-17!9;UBERON:0004808!3.09e-17!9;UBERON:0001277!3.09e-17!9;UBERON:0004923!2.69e-16!24;UBERON:0000485!7.41e-14!11;UBERON:0000331!1.70e-09!3;UBERON:0002116!1.70e-09!3;UBERON:0001204!1.70e-09!3;UBERON:0001168!1.70e-09!3;UBERON:0001007!3.17e-08!128;UBERON:0001555!3.17e-08!128;UBERON:0007026!3.17e-08!128;UBERON:0004119!5.20e-08!130;UBERON:0000925!5.20e-08!130;UBERON:0006595!5.20e-08!130;UBERON:0004921!1.62e-07!126;UBERON:0004185!1.62e-07!126;UBERON:0001155!8.05e-07!2;UBERON:0000059!8.05e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,6.12e-34,3;UBERON:0002116,6.12e-34,3;UBERON:0001204,6.12e-34,3;UBERON:0001168,6.12e-34,3;UBERON:0001242,3.55e-30,13;UBERON:0001262,3.55e-30,13;UBERON:0004786,3.55e-30,13;UBERON:0000344,3.43e-26,15;UBERON:0002108,1.12e-25,4;UBERON:0001155,5.10e-23,2;UBERON:0000059,5.10e-23,2;UBERON:0000160,1.57e-22,31;UBERON:0004923,1.88e-16,24;UBERON:0005409,7.01e-15,47;UBERON:0001153,2.01e-12,1;UBERON:0001045,2.01e-12,1;UBERON:0007023,7.07e-08,51 | |||
|phase1_expression=0,0,0.454999239389536,1.20985684522732,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0,0.57423196411502,0.430761996159075,0.430942465371778,4.94060890586572,1.51218077855958,2.21730510655305,0,0,0,0.577703239502549,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0.658795818896044,0.251335208800269,0.596869416123452,0.19496408711912,0,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,1.20985684522732,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0,0.57423196411502,0.430761996159075,0.430942465371778,4.94060890586572,1.51218077855958,2.21730510655305,0,0,0,0.577703239502549,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0.658795818896044,0.251335208800269,0.596869416123452,0.19496408711912,0,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p4@Mgam | |short_description=p4@Mgam | ||
}} | }} |
Latest revision as of 04:16, 27 September 2015
Short description: | p4@Mgam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mgam_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -235bp_to_ENSMUST00000071535, NM_001171003, uc009bnf.2, uc012ekg.1_5end |
EntrezGene: | Mgam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 6.12e-34 | 3 |
ileum | 6.12e-34 | 3 |
mucosa of small intestine | 6.12e-34 | 3 |
wall of small intestine | 6.12e-34 | 3 |
intestinal mucosa | 3.55e-30 | 13 |
wall of intestine | 3.55e-30 | 13 |
gastrointestinal system mucosa | 3.55e-30 | 13 |
mucosa | 3.43e-26 | 15 |
small intestine | 1.12e-25 | 4 |
colon | 5.10e-23 | 2 |
large intestine | 5.10e-23 | 2 |
intestine | 1.57e-22 | 31 |
organ component layer | 1.88e-16 | 24 |
gastrointestinal system | 7.01e-15 | 47 |
caecum | 2.01e-12 | 1 |
midgut | 2.01e-12 | 1 |
adult organism | 7.07e-08 | 51 |